Gjac023655.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- -
- Assembly
- GCA_949825005.1
- Location
- OX463774.1:7195940-7197837[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-11 9.6e-08 32.2 0.0 2 37 7 42 6 46 0.91 2 2 9.8 1.1e+04 -3.2 0.0 27 38 441 452 441 454 0.82
Sequence Information
- Coding Sequence
- atgccTAAAAATTACTCGCAAGAGGACATCAAGAAAGCTTTGGCTGCGATCAAGGAAGGCATGTCGATAAAGGCTGCTGGCAAACAATTTGGAATACCGAAAACCACCTTGTTGTACAAACACAAAGGAATATACCCCATAGACGCCAGGAAGGGACCAAAAACAGTCCTGACCATCGACGAAGAGAAGGAACTGGTCGAGTGGATTTTGTATATTAGTCAAAGGGGCTTCCCCGTTACGAGGACTCAGCTGTTCGACAGTGTtcagattttaataaaaagcatGGGACGGGAAAACCCATTCACAAACGGCCGACCCGGACGCAGTTGGTACGAAAGCTTTTTCCGTCGTCACCCCGAGCTCACGGATCGGATCGCACAAAGTATGGCTTATGGGAAATCGTCTCCTACCGAAGAGGGCATAAGAATGTGGTTTTCCGAAGTCGCTAGGTACCTGCAGGAGAAGGACCTGCTCTGCGTCAAGCCGTCGAGAGTCTTCAGCTGCGACGAAGTGGCATTCGTGCTGAATCCCAAAGGGGACAAGGTGATGATCAACAAACAGGACAGAAATATCAATCTTTGTGGTAACGACAAGGAGTGTCTCACTGTTTTGTTCATGGTCAACGCCATCGGGGATGTCCCACCTCCCATGATAACGTTTTCGTACCAGAAAGTTCCACCCACGATTGCCGAAAGTGTTCCGAAGAACTGGGGCATCGGTACCTCGGAGGACGGATGGATGACGGGCGAGAGCTTCTACGAGTACATCTGCAACTGCTTCTACCCGTGGCTGGTGAAAAATAACGCCAAGTTCCCCATAGTCTTGTTCGTCGATGGATACAAAAGTCACCTCACGATGGCCTTGACGAATTTCTGTCGTCAGGCTGAAATCGAAATCATCGCCTTGTATCCCAACGCTTCCCAAATTCTGCATCCCCTGGATGCCGCAGTATTTCATCCACTGAAAACCGCCTGGAAGGAGGTCATAAGTGACTGGAAACTGAACCACGATGGAACTCGTATCGGAAAGGATGCTTTCGCATCGGTTTTGAAAACCGCAATCGACTCTGTCAATTTCTCCGAAATCGCCCCAGTGAGTTTTCAAGCCTGCGGGTTGCACCCTTTCACGGTTGAGGCGATCAATTTGAGGCTCATCAAggataacaaaaatatgaattcgcaATTGTTGCCATCGGCCATGAGTTTGAACTTTTACGATGACTTCGATCAAACCCGAAACAGTTTAGAACATTACATGCCGAGAAATAGGTTGGAGGGGTACGTGGACGACTACAAGAGGTCCTTGCAGCatttagaagaaaatataCCAGAGGATACCTTGTCGGGGTTCAAGCAGGTCGAACGGCACCAAGTGTGGTTCGGGGATGTCAAAGATGAAAACCTTTTTTACGTCTGGATGAAAATGAGAAGACTCGCTGGTGTTTCAGGTGATTCGATGGAAAGCGAAACCGAACCTCAGAATGAACTGGAGCCTCAAATAATGATAACCGAAGGTGTTAACGATGTAAATGACGCATAA
- Protein Sequence
- MPKNYSQEDIKKALAAIKEGMSIKAAGKQFGIPKTTLLYKHKGIYPIDARKGPKTVLTIDEEKELVEWILYISQRGFPVTRTQLFDSVQILIKSMGRENPFTNGRPGRSWYESFFRRHPELTDRIAQSMAYGKSSPTEEGIRMWFSEVARYLQEKDLLCVKPSRVFSCDEVAFVLNPKGDKVMINKQDRNINLCGNDKECLTVLFMVNAIGDVPPPMITFSYQKVPPTIAESVPKNWGIGTSEDGWMTGESFYEYICNCFYPWLVKNNAKFPIVLFVDGYKSHLTMALTNFCRQAEIEIIALYPNASQILHPLDAAVFHPLKTAWKEVISDWKLNHDGTRIGKDAFASVLKTAIDSVNFSEIAPVSFQACGLHPFTVEAINLRLIKDNKNMNSQLLPSAMSLNFYDDFDQTRNSLEHYMPRNRLEGYVDDYKRSLQHLEENIPEDTLSGFKQVERHQVWFGDVKDENLFYVWMKMRRLAGVSGDSMESETEPQNELEPQIMITEGVNDVNDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -