Gjac025204.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- -
- Assembly
- GCA_949825005.1
- Location
- OX463776.1:1772528-1773691[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-11 7.5e-08 32.6 0.0 2 37 16 51 15 57 0.91 2 2 2.4 2.7e+03 -1.2 0.0 30 44 252 266 251 267 0.86
Sequence Information
- Coding Sequence
- ATGGTTAACAAATACCAAAGAAGTTCTAATCGCCAGAGCTGGAATGAAGAGGACATGGAACGGGCAATCGCAGCCATCAACAGTAAAACGATGGGGTGGTTGAAAGCTTCAAAAGTGTTCAAGGTTCCTCACAGTACACTGCGCAGGAGGGtatgcaacaaaaataaacattttaaagGTTCAAACAAGGGACTGGGATCGATTTCAACCAGCCTGCCACCGGAAGCTGAAGAGGAGCTAGTTCAGCATATCTTGGATTTGGAATCGCGACTTTTTGGTGTTACAACGACTGAAGTGAGAAAACTGGCTTATAGCCTAGCCGAACGAAAAGGATACCGGCATCAGTTCAACAAAATCAAAGAAACTGCTGGTTGGGACTGGCTTTGCGGCTTTCGTAGACGACACCCTGAATTTTCGTTGAGATCTCCGGAGCCAACATCGGCGGCGAGAGCAAAGGCTTTCAATAAGGTCCAAGTAAGCACATTTTTTGACTTACTGAACCAAACCATGCAAAAAGAGAATATTCCGAGTGAAAGAATCTATAACATGGATGAATCTGCTCTCACAACGGTACAAAAACCACCTAAGgtgtttgcaaaaaaagacaaaaagcAAGTCGGTGCCTTGACAAGCGCCGAAAGAGGGCAACACGTTTCAGTAGCAGTATGCATGAGCTCCATTGGTCAATATATTCCACCTGCATTAATTTTTCCTCGGAAAAATCACAAGGCTGAATTTTTTGATGGCTCTCCTCCAGGCACACTTGAACTCTGTTATGAGACAGGATACATGGTATCTGATCTGTTTTACTGTTGGATGGATCACTTCATAAAATACGTAAAACCGACCAAAGAAGAGAAGGTAATTCTTATTTTGGATGGCCATGCAAGTCATTCTGCTTTAAATGCTCTGATTAATGCCAAGGAAAACGGTGTCATAATGATATGTCTACCTCCTCATGCGACGCATCGTATGCAGCCACTAGATGTGGCTTTTTTCGGTCCATTGGATTCCTATTATAACGTAGAACTCGCCAGTTGGTTGAAAAATCATCCGGGAAGAACGATTGGTCTTCACCAGGTCAGCTCATTGTTTACCAATGCTTATTGTAGAGCAGCCACGGTTGGGAATGCTTTGAACAGTTTTAAGCATAAGTCCCTTTAA
- Protein Sequence
- MVNKYQRSSNRQSWNEEDMERAIAAINSKTMGWLKASKVFKVPHSTLRRRVCNKNKHFKGSNKGLGSISTSLPPEAEEELVQHILDLESRLFGVTTTEVRKLAYSLAERKGYRHQFNKIKETAGWDWLCGFRRRHPEFSLRSPEPTSAARAKAFNKVQVSTFFDLLNQTMQKENIPSERIYNMDESALTTVQKPPKVFAKKDKKQVGALTSAERGQHVSVAVCMSSIGQYIPPALIFPRKNHKAEFFDGSPPGTLELCYETGYMVSDLFYCWMDHFIKYVKPTKEEKVILILDGHASHSALNALINAKENGVIMICLPPHATHRMQPLDVAFFGPLDSYYNVELASWLKNHPGRTIGLHQVSSLFTNAYCRAATVGNALNSFKHKSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -