Gjac000079.2
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- -
- Assembly
- GCA_949825005.1
- Location
- CATKWD010000012.1:2389-4032[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-11 1.7e-08 34.6 0.0 2 34 19 51 18 57 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGAACTAAGgacaaatatgaaaaaaagaacgtgAGATTGAAGTGGGACCCAAACAACCTGGAGAAAGCCATCAAGGCGGTTCGTGAAGGCAAAATGGGTACTTTGAAGGCCAGCAAAACTTTCCATGTTCCTAGGACTACCCTCCAAACTTTGAGCAGAAAAGTTGACGTTGACCCCGCTCAAGCTGCTCAAGTCAAGCTGGGCAGGAAACCTTTCTTAGGGAAAGAGTTGGAACTTGAGATTGTGGATTACTTGCTCgacatggaaaaaaatttttttggattcacCCTCAAAGATTTGAGGCGTTTGGCTTCTGAATTAGCCACTCGAAATGGACTGGAAACGCCCCGGAAAGACTCCAACGAAGCTGGTAGGGCATGGGTTGATTTGTTcttgaaaagaaacaaagaacgTTTATCTCTTCGAAAGCCGTGTGGAACATCTTTTGCGCGAGCTCTTGGATTTAACAAAGAAAATGTTGAAGCCTTCTTCAATATTTTGGAAGAGCTCTACGACAAATTCAAGTTTCCCccagaaagaatttttaatgttgATGAAACAGGTTTGACCATAGTTCAGAGCAAACATCCTAAAGTCATTTCGAGGAAAGGGAAGAAACAAGTGGCTGCTTTGACATCCGCAGAAAGAGGTAGCACCATCACAGTTATTGCTTGCATGAGTGCTCGTGGGATTTTCGTTCCTCCTTATGTGATTTTCCCAAGGGTGAACATGGCCACAACGCTTATGAAAGGTGCTCCTCCTGGGACTATTGGAAGGGCCCACCCGTCTGGCTGGGTGCAAACTCATCTGTTCACCGAATGGCTTTCTTTATTCATTGAGCAAACTAAACCAACCGAACAGTCCCCTGTACTGCTTATTTTGGATGGACATTACAGCCATGTCCGAAATATGGAAGTGATAGACTTGGCAGGGGCTAACTTTGTGACCATTGTGTGCCTCCCTCCTCACACAACCCATAAACTCCAGCCACTGGACAAGAGTTTTATGGGTCCTTTGAAGACTTACTACAGTGAGGAAATTAGGAAATGGTTAAGGCATTCTTACCGTCCTGTCGCACCTAGTGACCTAATGGAGCTCTTTGGAAAAGCCTATTTGAAAGTTCAGACTGGAGAGATCGCCGTAAATGGTTTCAGAGCAACGGGGATATACCCTCTTAATGGacatattttttcagaaagtGATTTCTTGGCTGCTGCAGAGGAAGCTGATAAATCGTGCAACACATCACTTTCTGTAGCAACTTCTATCAATTTGTCTGACCCCTCCACTCCACCCAAATCGGATCAACCCTCGACAAGTAAACATCAAGATCTGAGCACCCCAGATCAACGACCAATTCCTGAAACATCGAAGTCCGAAAAGGTTAGTCCTTATGATGTAGCTCCAATCCCCACCATTACAAGGAGAAAAAGCAATCGTGGTCGCAAGAGTGCCAAGACTTGCATCATTACTGGATCTCCtcacaaaaatgaattaaagaaAAGTTTGGAGAGTACAGCCTTGAAAAAGAATCGGAGGGTTGAGAACGTAGAACCAGGTGCGCGAGCGAAGAAAAAGAGTTTAAGAGTGTCAAGCCAACCTAAGAAGCCAGGGATGAAAGTTAAGATAATAAAATAG
- Protein Sequence
- MPRTKDKYEKKNVRLKWDPNNLEKAIKAVREGKMGTLKASKTFHVPRTTLQTLSRKVDVDPAQAAQVKLGRKPFLGKELELEIVDYLLDMEKNFFGFTLKDLRRLASELATRNGLETPRKDSNEAGRAWVDLFLKRNKERLSLRKPCGTSFARALGFNKENVEAFFNILEELYDKFKFPPERIFNVDETGLTIVQSKHPKVISRKGKKQVAALTSAERGSTITVIACMSARGIFVPPYVIFPRVNMATTLMKGAPPGTIGRAHPSGWVQTHLFTEWLSLFIEQTKPTEQSPVLLILDGHYSHVRNMEVIDLAGANFVTIVCLPPHTTHKLQPLDKSFMGPLKTYYSEEIRKWLRHSYRPVAPSDLMELFGKAYLKVQTGEIAVNGFRATGIYPLNGHIFSESDFLAAAEEADKSCNTSLSVATSINLSDPSTPPKSDQPSTSKHQDLSTPDQRPIPETSKSEKVSPYDVAPIPTITRRKSNRGRKSAKTCIITGSPHKNELKKSLESTALKKNRRVENVEPGARAKKKSLRVSSQPKKPGMKVKIIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00738257;
- 90% Identity
- iTF_00738257;
- 80% Identity
- -