Gjac005588.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- Sry-delta
- Assembly
- GCA_949825005.1
- Location
- OX463762.1:15702167-15707445[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-12 3.6e-09 36.8 0.0 2 37 73 107 72 112 0.93 2 2 8.7 9.8e+03 -3.0 0.0 30 38 137 145 137 148 0.84
Sequence Information
- Coding Sequence
- ATGTTCATCTACTTCTCTGatcaAATCCAGTGGGACAGCAACGATAGCGCTGGCGCTTCTTCGGGGCTCTATCAGCGAGTAATTTCGGTAGAATCGTTTCGGCGGCAGATGATAGCGGCTTCGAGAGGCCGAGGAGGAAGTACACGAGCTTCGGCTTCCGTTCTGAACATAACAAGATCGTGGACCAGAGCATGTTCCTCGTATCAAAGACATCTTCCTGAAGATGTCATTAGAGCAGTCGAAGCGGTCGAAAACGGAATGTCCTTTCGAAAAGCAgctaaaatatttcatatctCGAAATCGGTTATACATCGATACAGTAAAATCGATTCCAAAGTCAAGGGTGGTTTCGGAAACTCCACGAGAGTCACCTACCCCTGCAAGAATTGCGGGAAAGTCTACAACTACTACTCAAGCTTGGCGAGACACCTCAAGCACGAGTGCGGAGTCGAACCCAAATTTCACTGTCCATTGTGTCCTTATAGAACGAAGCATAAATCCAGTCTCAATACGCACCTCAATGGGAGACACATGAAGCTTCTTAACGAATTTTACAGTTTGCCGAACGGAAATAGCGCATAA
- Protein Sequence
- MFIYFSDQIQWDSNDSAGASSGLYQRVISVESFRRQMIAASRGRGGSTRASASVLNITRSWTRACSSYQRHLPEDVIRAVEAVENGMSFRKAAKIFHISKSVIHRYSKIDSKVKGGFGNSTRVTYPCKNCGKVYNYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKLLNEFYSLPNGNSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00738720;
- 90% Identity
- iTF_00738720;
- 80% Identity
- iTF_00738720;