Gjac007539.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- ttk
- Assembly
- GCA_949825005.1
- Location
- OX463763.1:15234840-15239141[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-05 0.012 15.9 0.0 2 42 203 243 202 245 0.85 2 4 1.1e-10 1.3e-07 31.8 0.0 6 39 257 290 253 295 0.88 3 4 0.15 1.7e+02 2.7 0.0 21 34 324 337 310 342 0.80 4 4 2.4e-12 2.7e-09 37.2 0.0 4 40 368 404 365 409 0.91
Sequence Information
- Coding Sequence
- ATGTGCGAGGGAAGCAACACAGATGCCCAGATGGAACCGCAAAGTTATTGTTTTAAATGGACCGATTACCAGAACCACTTGTCTTCAGTCGTTCGTCAACTTTTAGAAGAGGATTGTATGGTAGATGTGACTCTCTCCACGGAAGGAGAGCGTATTCACGCGCACAGAATTGTTTTATCTGCCTGTAGCACGTTGTTCCAAGAAGTCCTCAGTGATGTTAACGAAGAGCATCCAACCGTGATACTCTCCGATATCTCGGCTCAAGATGCGAAATCGatcattgaatttatttatcatgGCGAAGTTCGAATTCCCgttgaaaatattagtaatCTGCTAGAAGCCGCACATTCCTTAAAGATTTCTGGACTTATGGAGATCAATGGATTGGATGACACAGAAtcagcaataaataattacaaagatCCAAGCGAAGGGAAACCAGAACTAGATACGGAGTTAAATGAAAGCGAAAGTAAAGAACAGGACATAGAAGCTATCGAGAAAGAAAGCGAAGATGCTTTTGATCAAAATGAAACCGAGTCCCTAAGtctcattaataaaaaacgaaaGCGAAGAAGGGACACCGCAAAGAAGGATTACAGCGAAGACATGTTACTTTCAGCAATTAACGACTTGAAGTCTGGGCAAACTTTGATAGAAGCCGCAACGAAGAACAACATTCCCAGATCTACTTTATATATGCGAGCCAAAAGTTTGGGCATTCATTTGCACGCCACTCGGAACGAATACCCACCAGAATGTGTTAAAGCCGCTATCGATTCGGTCATTGCTggaGGTTCGAGTCTGCAACATGCTTCGGAAATGTACAATATCCCAAAGACTGTTCTGTGGAGACGAATACAAAAAGAGGGATACCAGATCATTCGTTCGGAAATGAAACGATCGTATTGTTCGGATAAGAGAGAAGCTGCGGTGAAAGCCTTGGAACGAGGAGAGAATCTAACCAAAGTCGCCTTGGAATTTCAAATACCGAAAACCACTTTGTTTCGAGATAAAGCGAGACTAGTAGATGAGGGTAAGTTACCCGTATCATTTTGGAAGAAACGAAAGACTGACGGTGAAGACCAAAAGAAATCACGATTGGAAGAAGCAGTAGCTGCTTGTAAGAATGGTAAAATGTCTCAGGCTACTGCCAGTATGACTTATCATATTCCTAAAACCACAATTTGGCGAAGACTTCAACAGGATGGGAAGAAAATGGAACAAAGGAAACGGCGAAAGAAAAGCGAGACTACCAAAAGCTCGAACGAAGCTCAAGGGAAATCCAGGCCAGCTGCACGATTCAATTACAATGAAatatcaCCAGAAATTCCTATAACGTACATCGATGAAAACAGTATACCAGAGGATTCTGTTATAATTTTAACCACCGAAGATGTTGAAGGATTAAATCTTGATGAAAGTAGGCAAATTATAGTAAATGCTGTAAACGAACTTTactaa
- Protein Sequence
- MCEGSNTDAQMEPQSYCFKWTDYQNHLSSVVRQLLEEDCMVDVTLSTEGERIHAHRIVLSACSTLFQEVLSDVNEEHPTVILSDISAQDAKSIIEFIYHGEVRIPVENISNLLEAAHSLKISGLMEINGLDDTESAINNYKDPSEGKPELDTELNESESKEQDIEAIEKESEDAFDQNETESLSLINKKRKRRRDTAKKDYSEDMLLSAINDLKSGQTLIEAATKNNIPRSTLYMRAKSLGIHLHATRNEYPPECVKAAIDSVIAGGSSLQHASEMYNIPKTVLWRRIQKEGYQIIRSEMKRSYCSDKREAAVKALERGENLTKVALEFQIPKTTLFRDKARLVDEGKLPVSFWKKRKTDGEDQKKSRLEEAVAACKNGKMSQATASMTYHIPKTTIWRRLQQDGKKMEQRKRRKKSETTKSSNEAQGKSRPAARFNYNEISPEIPITYIDENSIPEDSVIILTTEDVEGLNLDESRQIIVNAVNELY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00738481;
- 90% Identity
- iTF_00738481;
- 80% Identity
- iTF_00738481;