Basic Information

Gene Symbol
ARID5B
Assembly
GCA_949825005.1
Location
OX463772.1:7330186-7340861[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-24 1.6e-20 73.9 0.0 2 89 270 355 269 355 0.95
2 2 7 2.8e+04 -14.6 15.9 24 78 587 642 559 648 0.55

Sequence Information

Coding Sequence
ATGAGCTTTGACGGGCAATCAAATTATCGTTGTACGCCGTACGCCGTAGTAGATAACGATCCACTCGAGGACGAAGTGCTGACGATATCGGAAAAGGTCGTGGTGAGAGTCCACGATTTGGTAACCTGGTTGTCACCGTCCCTGGAATGGTCCTGGGGCAGAGAGGTGTCCTATCCCTCGTCGCCTTGCTCGTCCCCGGGTAGCAGCCCGGGACGATACGACACACTGCCGCAGGTCCTGACGGACCCGGGTATCGACTTCTCCGACATCGAGAAGCAGCAGAAGGAGTACGAGAGCAACCTGACGAGCGTGACGAAGAAACCGGAAAGCGCCACCGCGCAGACCAGGGTGATAGTGCTCTCGTACCCCAGGTACTGCCGTTACCGGGCGATGCTGAGGAGGCTGGAGGGCGCGGAGCCCTCCTGGTTGTGTTCATCCGTAGCTGCCGCTCTCGGCGGCTTCACCGCGCTGCCGGGCACCAGAGTACTTTTCTGCAGGGACACCTTCGATTACCCCGACTTGGAGACCCACGAGTTACTTTGTAACCATTTAGCTCCGAAGTTGAAAGGTCGACCGAGGAGGAAACGCAAAAAGCGAAGCGCCTCGCCCGAGGAGTCGAGCAACGAGAGCGAAGCCTCCGTGGCCTCTGTGGTGGCTTCGACGTCCAAGGTggcgtcgtcgtcctcgtcctcgtcgtcttCGTCGTCGGTCGCGAATTCCACCAACTCCTCCTCGAACTCCTCCACGTCGAACAGCGGAAGGCCCAGCGCCGGGGTGCGTCGCAGCGAGCGCAAGACCAGCGCCGAGGAGAGGAAATTCCTCAGCGACGTGCAGAATTTCATGAACTCGCGAGGAACTCCCGTGGGGAAGATGCCGCTCCTGGGATACCGGCAAATCGACCTGTACCTTTTCTACACGAAAGTTCAGACTCTCGGAGGCTACGACTCCGTGAGCGCCGGACGATTGTGGAAATCCATTTACGACGATATCGGCGGAAACACCACTTCCACCAGTGCCGCGACCATTACCAGAAGGCATTACGAGAGGTTACTGCTTCCGTACGAGAGGCACCAGAAGGGCGAGGAGACCAAGATCCGACCGACTCTGGGGAGACGAACGAAATCCTGCAGCAGCTCCGAGGAGTCGTCGGAGGTGAAGCAGGAACCCTGCGACCAGCCCCCGAAGACTCCGACTCCCCCACCGGTAGCGTCGCCGTCGGTGCTTCCCTTGCATTTGGACTCGagtgcaactgcaactgcaactgcgaCCACCACTACCGCCACTACCACCACCCTCGCATCAGCAGCGCCTACGATCAGCGGCCGCGTGGGCGTAGGAGTGGGCGGTGGTGCGCCTTTACGGTCCATCCTGTCGACTTCGTCGTTGCTACTGGGGGAGAAACCCCGAGTGCAGGAAGGCGTGGGCGTCGGAGTCGGAGTCGGAGTCGGAATCGGCAAGACCTCGTCGCTGAGAAGCGTCCGCGTGAAAACGGAGCGTCTGAAGTCCCTGAACACGATAATAGCCAATGGTGCTGTCGCTACCACGACCAACAGTGGCGTCGCGGCGGTCGCGATTACGTGCAACAAGCAATTGTCGCCTCAGTCGTCTCCTCCGGTGCAGGTGCAGGTGCAAGTGCAACTTCAGGGTCAGGGTTCGTCGATTCAGATGCACctgcaacagcaacagcatcaACTACACctgcaacaacaacaacagcaacaacagcaagaacaacagcagcaacaacaactgCAGGAGCAGCAAcagaaattgcaacaattgcaGCAACAGCAATTGCACCAACAGCAGGAGCAACAACAGAAGCTGCAACAGCAACAGGAGCAGCAAAAATTGCATCAACAAGCTCAACAATTActgcaacaacagcaacaattgcatcaacaacaacaacaacagcaacaacaacaacaattccAGCAACTGCCAAGTCCCACGTCGTCCCTGAATGACTTGGGAGCGATAATGACACCGAACAGTACGCCCTCGACCACGCCGAACGGTACAATTTGCCAAAGCGTATTGGAGAGACAACTGAAtagtaatattagtaataatagtaatggtaatagtaataataataataataacaataatagccAATTGATGATGATACATCCGCAACAAATGCTGATAAGCGGGGATCAGTCGCAAGAACTGGCCTCGAGTATCAATAACGTCCACGCGAcgccgacgacgacgacgacgacgatagCGGCTGTAGCGACGACGGCAACTACCACCACGACGACGACCAACGTCACGACGTCCGTCGTCACGTTAACGCCGCCCCCGGAGAAGGAGCTCATGAAGGAGATGAAGCTGGAAACGAAACTCTCCGGACCGCCCCTGATCACTCTCGCCCAGGGCAAGGAGAACATCCTGCCGGTGTTCGTCCAAGAGAAGGCCAATAGCATGCAGTTCAGTAGCGAGAAGAACAAcggcagcaacaacaataacaataataataataataatagtaatagcaacaacaacaataacaataatacgaCGTTGGTTTTGCCACCGCGGTCACCCGAAGTCATCGATCTCGAGATGGAGAGCGACAACAGtagcaacaacaatagtatcaacaacaacaacaacaacaatagtagtagtaataataataacaacaacaacaacaacatgaGACACGACAAGATCATCATTCCGAGCTTCaagaaacgaaaattggaGATTCTAAGGGAGGGCGGCCTGGAAGTGACGGCCGTGGAATTGGACTCCTCGAGGCCCTCGGTAATCCAGATCACGAACGCGCCGTCGACGactacgacgacgacgacgacggtgCCGATGAACACGAGGTGCGAGGAGAAGCTGCTACCGACGAGCGTCGTACCGAGCGCGCCGAAATTGATTTCGGTCACCGTCACCCCGGATATCGGCCACATCCTGCCGGACGGCACGAAGATGGTGCACTCCGGCGGCATCCACGGCATGAAGAATAATCACTgtcacaataacaataataatagtaatagtaatagtggtagtacttttaattcgaataatggtaatagtaataatagtcgAGTTATTAATCTCGGTGGTAATAATAACCAAGCTTCGCTTTTACAACTCTACGCAAACGCTAACCATAAGAATAGTAGCAGTGGCGGCGGAAACAACGGAAATAACGGCAGCAACGGCagcaacaatagcaacaacaacagtagcGGCAGCAACGGTAGCGGTAGTAGCGGTTGCAGCAGCAACAGTAGCTGCGGCAACGGCAACAATGGCACCAATGGGGGCAACAGTAATCATAATCACAATCATCGATTCAACAACTCGAGTGGGAGGAATatccaacaacaacaacagcaacaacaatcgCAACAACCCCAGCCGCAGCAACAAACAACGACGGCGGCAGGGACACCGCCCCCGAAAGTGACGCAGTCCAGGTCGATCTTCTCCCATAACGAGCGAACGGTTTATGGGAACCCCAAGGACATCTTGTACCCGGCGAAGTTCAACTCATCGTCGACTTCCTcgacgtcgacgacgacgaccacGACGATGTTCTTCCCGGAGCTGACGCCGCAAAGCAACGACCCGAGCACGCCGGGCGTCGGAATCGccggcggtggcggtggcggcggcggcggcggagGGGTGCTGGACCTCACGCAGAAGAGCAAcgagaagcagcagcagcagcaggagcagctGCCGTTCCAAAGACCGAGTCTGGAGATCGTGAGGGTACCGGTCGTGCCGCGACCCAGCGCGGCTTCGATCGACTTGCGATGCAAGGACAGCAGCAAGATGATGAAGGTCCACGTCAACGGCACCGCGGGGACCAATTACGTCATCGACACCCGGACCATGACGACCAACAACCTGGAGATCACCCTCGTCAATTCCACCGGAAAGAATGCGAAGGTCATGCAGGGCAACAGCGGCAACGCGAATTCTTCGTCCACGGTTGCGCCTGGTGGTGGGACTGGTGTTGGGAGCGGAAGTGGAACCGGGTCGGGAACTGGTTCCAATATGGTACAGATCAGCAGACAAGGGGGTATCGTCAACGGGAAGTACGGTGGTTGCGGTAATTCCGTGGGAAGGAACCACGAAATGCCGATAGTCTCGCCCTACACCCCCAGGAAACCCAACCAGGTGATACCGAACGTCCCGAACCTGAACCATTTCTGTGGAAACGCCGGGAAAAGTGGACCCGGGGATTTGCCGATGGCCAATTCCTCTACGATGTCACGAGTGACGTTGAAACAACAAATAGCTAtcgacaaaagaaaatccatgGAAGCCGCCTGCAACAAAGACCAACATCACAGGAGAATCAGTGAGGGAGATAAAACGATGAACGACAtgaacagcagcagcagcagcagcacctCCAAATCCGACAATTTTCGACGTCACAGTGTTCCCAATTTGCCGTCCGGTTTCGTGCCGAgtctgcagcagcagcaattgcaacaacaacaacagcaacaacaacaacagcagcagcagcaacaacagcaacaacaacaacagcagcagcagcaacaacagcaacaacagcaacaacagcaacaacaacagcaacaaaatAATACAACGACACCGTCGTCGTTTCTCTCGCAACTGCCGAACTCGGGAAAGTTCCTACCGATGCTAGACCCCGTTTACTACTCGGCCTTCTACAACGGACTCTTTCCGCACCCGCACCAGCCGGTACCGGCTCATCCGCACGCACCGCTGCCGCACCCGTCGTCGCACTCGCATCCGCAGCATCCCCAGCATCCGGGAGCAGCGTCCCTGCCGCCGTCCGGGACGACACCCGCGTCCTTCCTACCGCCGGAATTCAACGCCTACTATAAGGAACTGTTGGCTTCCACGCAATCGAGACTCGCCATGACGGGACAGCAGCATCAACCCGCTGTTCCGACGTCGAAGTAG
Protein Sequence
MSFDGQSNYRCTPYAVVDNDPLEDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSYPSSPCSSPGSSPGRYDTLPQVLTDPGIDFSDIEKQQKEYESNLTSVTKKPESATAQTRVIVLSYPRYCRYRAMLRRLEGAEPSWLCSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPEESSNESEASVASVVASTSKVASSSSSSSSSSSVANSTNSSSNSSTSNSGRPSAGVRRSERKTSAEERKFLSDVQNFMNSRGTPVGKMPLLGYRQIDLYLFYTKVQTLGGYDSVSAGRLWKSIYDDIGGNTTSTSAATITRRHYERLLLPYERHQKGEETKIRPTLGRRTKSCSSSEESSEVKQEPCDQPPKTPTPPPVASPSVLPLHLDSSATATATATTTTATTTTLASAAPTISGRVGVGVGGGAPLRSILSTSSLLLGEKPRVQEGVGVGVGVGVGIGKTSSLRSVRVKTERLKSLNTIIANGAVATTTNSGVAAVAITCNKQLSPQSSPPVQVQVQVQLQGQGSSIQMHLQQQQHQLHLQQQQQQQQQEQQQQQQLQEQQQKLQQLQQQQLHQQQEQQQKLQQQQEQQKLHQQAQQLLQQQQQLHQQQQQQQQQQQFQQLPSPTSSLNDLGAIMTPNSTPSTTPNGTICQSVLERQLNSNISNNSNGNSNNNNNNNNSQLMMIHPQQMLISGDQSQELASSINNVHATPTTTTTTIAAVATTATTTTTTTNVTTSVVTLTPPPEKELMKEMKLETKLSGPPLITLAQGKENILPVFVQEKANSMQFSSEKNNGSNNNNNNNNNNSNSNNNNNNNTTLVLPPRSPEVIDLEMESDNSSNNNSINNNNNNNSSSNNNNNNNNNMRHDKIIIPSFKKRKLEILREGGLEVTAVELDSSRPSVIQITNAPSTTTTTTTTVPMNTRCEEKLLPTSVVPSAPKLISVTVTPDIGHILPDGTKMVHSGGIHGMKNNHCHNNNNNSNSNSGSTFNSNNGNSNNSRVINLGGNNNQASLLQLYANANHKNSSSGGGNNGNNGSNGSNNSNNNSSGSNGSGSSGCSSNSSCGNGNNGTNGGNSNHNHNHRFNNSSGRNIQQQQQQQQSQQPQPQQQTTTAAGTPPPKVTQSRSIFSHNERTVYGNPKDILYPAKFNSSSTSSTSTTTTTTMFFPELTPQSNDPSTPGVGIAGGGGGGGGGGGVLDLTQKSNEKQQQQQEQLPFQRPSLEIVRVPVVPRPSAASIDLRCKDSSKMMKVHVNGTAGTNYVIDTRTMTTNNLEITLVNSTGKNAKVMQGNSGNANSSSTVAPGGGTGVGSGSGTGSGTGSNMVQISRQGGIVNGKYGGCGNSVGRNHEMPIVSPYTPRKPNQVIPNVPNLNHFCGNAGKSGPGDLPMANSSTMSRVTLKQQIAIDKRKSMEAACNKDQHHRRISEGDKTMNDMNSSSSSSTSKSDNFRRHSVPNLPSGFVPSLQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNNTTTPSSFLSQLPNSGKFLPMLDPVYYSAFYNGLFPHPHQPVPAHPHAPLPHPSSHSHPQHPQHPGAASLPPSGTTPASFLPPEFNAYYKELLASTQSRLAMTGQQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-