Basic Information

Gene Symbol
grh_1
Assembly
GCA_949825005.1
Location
OX463761.1:15189746-15216941[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-62 2.3e-58 197.8 0.0 25 221 336 534 322 536 0.91

Sequence Information

Coding Sequence
ATGGGGCAGAAGTTACTGGTACAAGAAGCACCTGGTTCCACGTCAGGAAATCGtatggaaaataatgaaaataatggagCTGGCGGTGAACTTCACCATTTTCTCCATCAATATAACCAGCAATCACATAGTCCTGGACAAAATCTTCAAGGTGGTTTACCGTTACCTTTAAGTCCACAATCTTTACGTCACGATAGTTCATCTAATACTGGTATAGCTGGTGTCAAAAGGGAACCAGAAGACCTCAGTTCTTCGCGTACAGCGCAACAGTCAAATAAAAGACACAAACAAGCTCAACCGGAAAGTCCCACGCCACCTGGAATGTATCATCACCATCAACATCAACTTCAGGTACAGCAACAGTATGGGAGTCCATACGATCCTTATACATCTTGTAGTCCAAGATTACAATCAACCGGATACACATCAACTGGTGGATCTAATGCTGGAGGAACAGGGAACGGTACTAACCAAGGAGGACTTCATCAAGAAGCAACAACAGCAGTCTATGTAACTGGTGATACCTTACCGCCATTAGCATCCTCGAgttcatcatcattatcaacaacaacagctTCGTACACGAGGTACGAAGTTGTACCAAGTTCTTATGCTACAACACATGCTATTCGTTCATCATCAAGTAGCAGCAAAGTCCTTACCGTTGATCTTCCCAGCCCTGATTCTGGAATTGGAGCGGACGCTGTGACGCCTAGACAGGATCATCATCCCCCAACGGCTCTTCATCAGTCTTCATTTGATTACACGGAACTGTGTCCTGGAGGAACGACCCCCGGAACTGCGGTAGTCCTTGAAAGTGGTGCTGTAATTCATCACCAGCCTTTGCAATTACAATTGCAACAAAATCACACGCAAGCGCAAGTACAGCGCGGAGGTTTAGTATCTGCCGGAACAACAAATGCTAATCCAACTCCACCTCGATCAAGACCATGGCATGATTTTGGAAGACAAAACGATGCTGATAAAATTCAGATACCAAAAATCTATTCAGCCTATGGGTTTAAATATCATTTGGAATCTCCTATTAGTACTTCTCAAAGGAGAGAAGATGATAGAATAACGTATATTAATAAAGGGCAATTCTATGGTATCACTTTGGACTACGTTCCGGATCCAGACAAACCGCTTCTAAAAGCTGGACAGACTGTGAAGAGCGTGGTAATGCTTATGTTCCGAGAAGAAAAGAGTCCCGAAGATGAAATTAAAGCCTGGCAATTTTGGCATGGAAGGCAGCATTCTGTCAAACAACGTATACTTGATGCCGACACGAAAAACAGCGTTGGGCTTGTCGGTTGTATCGAGGAGGTTGCACACAACGCAATTGCAGTTTACTGGAATCCCCTAGAATCTTCCGCTAAGaTAAACGTAGCGGTTCAGTGTCTAAGCACTGATTTCTCAAGTCAAAAAGGAGTTAAAGGTTTACCTTTACATATTCAAGTAGACACTTATGAAGAACCACCACCTCATACTCATTCGTATACACCTCCATCTCATCGAGGATACTGTCAAATTAAAGTCTTTTGCGATAAGGGAgcggaaagaaaaacaagagaCGAAGAGAGAAGAGCAGCAAAACGAAAAATGACTGCAACAGGGAGGAAGAAACTTGATGAACTTTATCATTCTGTGACCGAAAGAAGTGAATTTTACTCTATGGCTGATCTTCATAAACCTCCCGTTTTATTCTCACCTCCTGCTGAGCATGCCATAGACAAGTTTTCTACGATGGAATTATCGGGTTTCTACGGAAGCGGTGGTGGAGGGGGTGGTGGAGATACGGATACTTCATCATTGAGTAATGGTGAGGGTGGAGGATTAAAAGGAGGAGGAAGTAGCAGTCCTTATCCTTCGTGTGGTAGACCCAACTTACCGGCACTCAAATTTCATAATCATTTTCCACCTGATAACTTGAGTAATCTCCACGACAAGAAGGATTCATTGCTGATGCAGGTACAAGAACTGCAAGGTTCTGTTCTTCAAGGGGTGCAACCAGGTAGCTTAGCCAGTACTACGGTAGTCTCTGGTGTTGGTAACCGATTGCATttgcaacaacagcaacattTACGCGGTACCGATGCCGAAGAACGAGTTATGCTTTACGTTCGACAAGAATCCGAAGACGTTTACACACCCCTTCACGTTACACCACCAACTGTACAAGGACTTCTCAATGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAATCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGATGACGACATGATACGATATTACGTCGATGAAGACTTATTTCTACTGGAAGTAAGTCATTCTCGAATAAATCCCGACCCTAGCGATCGCAATACGAATCCAGGATCACCAGGCGATCCAGGAGATCCAGGGGATCCACCAGCGTCATCAGGATACGATGTGACTTTAATAGAATTACCATCAACACCAACAGCAACAACTTTACCACCATCACCACTTTCCAATCCAACGCATGCACATACGCATTCCCATGTTGTACATTCACATGTTATACACGACAATGGTAATACGTGA
Protein Sequence
MGQKLLVQEAPGSTSGNRMENNENNGAGGELHHFLHQYNQQSHSPGQNLQGGLPLPLSPQSLRHDSSSNTGIAGVKREPEDLSSSRTAQQSNKRHKQAQPESPTPPGMYHHHQHQLQVQQQYGSPYDPYTSCSPRLQSTGYTSTGGSNAGGTGNGTNQGGLHQEATTAVYVTGDTLPPLASSSSSSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGTTPGTAVVLESGAVIHHQPLQLQLQQNHTQAQVQRGGLVSAGTTNANPTPPRSRPWHDFGRQNDADKIQIPKIYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHSYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHAIDKFSTMELSGFYGSGGGGGGGDTDTSSLSNGEGGGLKGGGSSSPYPSCGRPNLPALKFHNHFPPDNLSNLHDKKDSLLMQVQELQGSVLQGVQPGSLASTTVVSGVGNRLHLQQQQHLRGTDAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSRINPDPSDRNTNPGSPGDPGDPGDPPASSGYDVTLIELPSTPTATTLPPSPLSNPTHAHTHSHVVHSHVIHDNGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01089761;
90% Identity
-
80% Identity
-