Basic Information

Insect: Gandaritis pyraliata
Gene Symbol: Mtf1
Assembly: GCA_947859175.1
Location: OX401855.1:7866671-7871264[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1e-05 0.0006 20.3 0.8 1 23 36 60 36 60 0.98

2 7 0.0086 0.5 11.1 0.8 1 23 66 90 66 90 0.97

3 7 0.00036 0.021 15.5 0.6 1 23 96 120 96 120 0.96

4 7 4.1e-06 0.00024 21.6 1.0 1 23 125 149 125 149 0.97

5 7 9.8e-06 0.00057 20.4 2.4 1 23 155 179 155 179 0.98

6 7 0.0023 0.13 12.9 0.2 3 23 187 209 185 209 0.87

7 7 0.58 34 5.4 1.1 2 23 583 606 582 606 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1e-05	0.0006	20.3	0.8	1	23	36	60	36	60	0.98
2	7	0.0086	0.5	11.1	0.8	1	23	66	90	66	90	0.97
3	7	0.00036	0.021	15.5	0.6	1	23	96	120	96	120	0.96
4	7	4.1e-06	0.00024	21.6	1.0	1	23	125	149	125	149	0.97
5	7	9.8e-06	0.00057	20.4	2.4	1	23	155	179	155	179	0.98
6	7	0.0023	0.13	12.9	0.2	3	23	187	209	185	209	0.87
7	7	0.58	34	5.4	1.1	2	23	583	606	582	606	0.93

Sequence Information

Coding Sequence: ATGTTCCTGTTTAACAGTAACAATGACCCTGAAATGCCTAAGCCCAGTATCGACATCACAAATGCCATGGAGAACAAGAGAAAAATCGAGGATAACGGAGCGAGATATAGGTGTGAGTTTGATGGATGTGAACGAACATACAGCACGGTTGGAAACTTACGGACACACATGAAAACTCATACAGGGGAATACAGGTTCAAATGTTCAATGCAAACATGTGAGAAGGCATTTCTAACATCATACAGTCTGAAAATACACGAAAGGGCACACACAAAGGCAAAACCGTTCGCTTGCAACTATGGGGGATGCAGAAAAGCATTCAACACTTTATACAGACTACGAGCGCATCAGAGACTTCACAGCGGGGACACATTCAATTGCAAAGCAGACGGATGTGCCAAATTTTTCACAACACTCAGTGACTTGAAAAAACATATCCGGACACATACACAGGAGCGCCCATACAAATGCGGGACCGAAGGATGCGGCAAGTCGTTCACGGCATCTCATCACCTGAAGGCGCACGGCCGCACGCACTCCGGATCTCGCCCGCACGCGTGCCTCGCGCCCGGATGCGGACGGCTCTTCTCTACTCCCACTAGTCTTCGCGCTCACGCTACCAAACACCAGTTAGATGCAGAACCATCGACCATGGATGCGTTGGACGACCCCCCTTCCGTGAAAAATGAGAGTGACGTCATGAACTGGGAGGTGCTTCTCGAATCGTTTGAAAAGATCAGTACAGACTGCACTTCAGATGCAGTCGACATTACAGAACTGCTCTTTGACAGCGCCCACGATGCCAAAACGGAATCCAATAACCTACCCGTAGACTACGATATCGCCAGCCTGACACTCTCACCCTTCAAGAAAGAGGAACCGTGGGTCGATATCACCGATCTCCAAGCTACCATACTGCCGGACGTAGTCACCCCCAGAATGGAAATCAAACCGAAAGCGATGCAGTTAGCATTAGCCAACGAGATAGAAGTCCAAGCGCCGTGGGTCGACGTAAGCGCATTGGCCGCTTCCATCTCCGAAACGCCTGTCACCATAAAGGAGAAAACACCAGAGAGCATTTTCACTCTTGCCACTTTCGTGCCCACTCACATGCAAAGCTACATCGACCTGAGCACGGACCTTGCGCCTACGGCCAACATTATGACTCACACTTCGTTCGATCTCGACACTCCCGAAATACTGGACATCGGCGATAAAGTTTTCAACGATAGCGAAATCGTCCCCAACGTAGAACACAGCAAGCTTTTCAACGACAGCGGAATCGTCGCCGACTCTACACCAACCAAGCTTTTCACTGAACACGAGGTGGCGGACCTGCAACCCAAATTAAATTCGGACATCGAACTGTTGATAGGATCCGGTGACGATAGGTCGTTGAACACGCCGCCCCCGTCTAAAGTTCACCAAAACATCGAAATAAACCCGGCAAATTCGGTACTGTTTACCACAGATTTAGATTTAGAAGATACGCTCTTGTTCGATAACGAGCCTCCATCGAACATGTATGTCGTGAGAACCGAGAATATATTCGAGAAGGAGATAGCAAAGCGGAACGCTCTGCAGCAACTAGCAGCTGACACTGGAATATGCGCCTGCATGGAATGTAACTGTGACCCGAGCGACGGGGAATGTCGAAACTGTAATCATGAGAAAGGGGCCGACAAAACAAAATGCTCTGAAGATACTTGCTCGTGCGTGGATTGTAAGTGCGATCACAAGGCGATGAAGTGCGCGGTAGGCTGCGGCCGCGCAACCGATACTAACGACAACACGTTTCTGCACTACCATAAGCGACACAATAACTCTACAAGCCTAGAGGACTTGGGTATTTACACAGTGCACGAGTGCGATTACGAGGCATCGCCGCCACCCGTCGCCGCCGACAGTCTCACATGCGCCTGCAACGTTGGAATAGGCGCAGGCGCTGGCGGCTGTTGCACCAACAACAACAGCGGAACAGACACTAAAAAAGAAGCATGTTGTGGAACCAGTGGAAGAAAGAAGTGTTGCGTCACGATATGCTTCAAAAAATTGGAAGCATTCAAACAATTTCTAACCGATAATGAACTAGTGCAAGCTCTCAAAGCGAGCAGCATTAATCTAACTACAAGTTTGTAA
Protein Sequence: MFLFNSNNDPEMPKPSIDITNAMENKRKIEDNGARYRCEFDGCERTYSTVGNLRTHMKTHTGEYRFKCSMQTCEKAFLTSYSLKIHERAHTKAKPFACNYGGCRKAFNTLYRLRAHQRLHSGDTFNCKADGCAKFFTTLSDLKKHIRTHTQERPYKCGTEGCGKSFTASHHLKAHGRTHSGSRPHACLAPGCGRLFSTPTSLRAHATKHQLDAEPSTMDALDDPPSVKNESDVMNWEVLLESFEKISTDCTSDAVDITELLFDSAHDAKTESNNLPVDYDIASLTLSPFKKEEPWVDITDLQATILPDVVTPRMEIKPKAMQLALANEIEVQAPWVDVSALAASISETPVTIKEKTPESIFTLATFVPTHMQSYIDLSTDLAPTANIMTHTSFDLDTPEILDIGDKVFNDSEIVPNVEHSKLFNDSGIVADSTPTKLFTEHEVADLQPKLNSDIELLIGSGDDRSLNTPPPSKVHQNIEINPANSVLFTTDLDLEDTLLFDNEPPSNMYVVRTENIFEKEIAKRNALQQLAADTGICACMECNCDPSDGECRNCNHEKGADKTKCSEDTCSCVDCKCDHKAMKCAVGCGRATDTNDNTFLHYHKRHNNSTSLEDLGIYTVHECDYEASPPPVAADSLTCACNVGIGAGAGGCCTNNNSGTDTKKEACCGTSGRKKCCVTICFKKLEAFKQFLTDNELVQALKASSINLTTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00857070;
90% Identity: iTF_00686724;
80% Identity: -