Basic Information

Insect: Gandaritis pyraliata
Gene Symbol: zfh1
Assembly: GCA_947859175.1
Location: OX401857.1:213575-216729[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.022 1.3 9.8 0.2 1 23 41 63 41 63 0.94

2 8 4.1e-06 0.00024 21.6 3.0 1 23 75 97 75 97 0.98

3 8 1.8e-06 0.0001 22.7 6.2 1 23 106 128 106 128 0.99

4 8 0.00013 0.0073 16.9 1.0 1 21 134 154 134 155 0.95

5 8 0.0049 0.28 11.9 0.2 2 21 421 440 420 441 0.92

6 8 9.4e-06 0.00055 20.5 1.1 1 23 739 761 739 761 0.94

7 8 0.00016 0.0095 16.6 7.9 1 23 767 789 767 789 0.98

8 8 0.066 3.8 8.4 7.1 1 21 795 815 795 816 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.022	1.3	9.8	0.2	1	23	41	63	41	63	0.94
2	8	4.1e-06	0.00024	21.6	3.0	1	23	75	97	75	97	0.98
3	8	1.8e-06	0.0001	22.7	6.2	1	23	106	128	106	128	0.99
4	8	0.00013	0.0073	16.9	1.0	1	21	134	154	134	155	0.95
5	8	0.0049	0.28	11.9	0.2	2	21	421	440	420	441	0.92
6	8	9.4e-06	0.00055	20.5	1.1	1	23	739	761	739	761	0.94
7	8	0.00016	0.0095	16.6	7.9	1	23	767	789	767	789	0.98
8	8	0.066	3.8	8.4	7.1	1	21	795	815	795	816	0.96

Sequence Information

Coding Sequence: ATGAGTTGGGTCCTTCTCGTTGTTGCAGTCCGCCCGCTGGCCTCCAGCGGCGGCGCCGACGGCAAGCCGGCCGAGGAGGAAGAGGAGCGCAGCGGCTCCCCGCTGGGCCCCGGCGGCCCCTTCGCCTGCAGCCAGTGCCGCGGCGCATACCCCACGCGCGACCAGCTCGAGCGGCACGAGACCCTGCACGCGCCGAGCACACAGGTGGATACTACACTCAAATATAcatgcaagatctgccacaagagcttcgccaatgtgtatcgcctgcagcggcacatgatcagccacgacgagagtgcgcagctgcgcaagtttaagtgcaacgattgcgataaagcattcaagttcaagcatcatctcaaggagcaccttcgaatacacagcggagagaagcccttcgagtgcgccaactgcggcaagaaattctcccattctggctcctactcgagtcacatgACCTCTAAGAAGTGTCTTGTTATGAACCTCAAAATGGGAAGAATAAAGCCTAATAACCCCGCCTTGAACCCAGATAGGAGTCCTTCCCGCAAGCGAGCCAATGCATTGGCGGCATCGCAACTGAATAACAATATTGCGCCAAACGGCAACTCCTTCTTCCCCATCCTACCGAAGTACAACGAAGCTGCAGCCTTCTTTGCTTCCATGTCTTCACAGGAAAACAATTTCCATCGTCCGCCTCTGGGACAACCCGGCATGAATCCATTTTACATGCCTCCTGGGATGCCGATGAGTCCCGCTACCGGCATCACGCCTTATAGCCTGCCTACATCACTCAGCCAATTATTTGAACAATTGGCCTCATCGCAGTACCCTCAGAGGAAAATTGAAAACCCTGCAAGTCCAAAGCAAACAAGTCCACATCCTACTAATTCCGAAGATATGATAGAAGAGGTCACGGAGGAAGACGACAAGCGATCGGAAGGCAGCGCCGACCTCGTCATGGACATTGAAGACGACGATGCAATTAAGAAGGAGCAAGAGGATCGAGAGAATGAATTCAGATCGCCAGCTCATAATTACGAATCCGTCCCTTTAAATAATAATGGCAACGAAGTCGATAATAAACACTCCGGCTTCAATACGATACTTGAATCTGTGAGTGCATCTGTGACCAAACATTTCTTTAGAACCAACATTGAAACCCTTTCTCCAATTTCTGGTAATGTTTATCCAAGCAGAGAGTCTCCACAAACTCCTCAGGTGGTCATTAAGGAAGAACCAGAAGTAGAAGATCCTCAGAGGTGCCTGAAATGTAATGCTACTTTTGCTAGCAAAAGTGATCTGTTAGACCACGAGAAAGTAGTCTGTAACGGTTTATTCAGGAAGCACGAAAGCTTGGCAGCGCAAGTGGCCGAAACGGTAGCTCTTAATAGATTAGAAATGGAGATGGAAATGCGCACTTCTGCCCAAAGTGGCGTAAGTGCAAGTGAAGACGAAGATTACGGTCGAGAAGACCGCGACGAAAAGGAGTCAATCCATGACAGCGATAGAAAGATCAGAGTGCGCACGGCACTGAGCGAGGAGCAGCAGGCGGTGCTCAAAGAGCACTACTCAATAAACTCGAGACCTAACCGGGAAGAGTTTAAGAGAATAGCCCAACAGATAGGACTCGATAACAGGGTGGTGCAAGTGTGGTTCCAAAATAACAGAGCTAGAGTTCGAAGAATGATTCAGTCCACAGCAGTGTCTGACCAGCCTCTAGACTTGTCAACGAAGAAATCTAACCCATCGGTGACCTCCAGTCCGTCGCCGTCTCCGTGCAGCATTTCAGTGACACATTCCGATTCGGAAGAAGCCGTAAACTTAAGTCAAAAATCGTCGCGCAGCACGACACCACTGCGACCCAACTATATGAACGCGTATCCACATTCCAATTGTTCCTCGTCGTCGTTCAATGACTTTCGGCTCTCACCATCTCCAAGCGAGACCTTGAATTGCCAAAAACGGTTGCTGCATCAAAAGCTAAACCCGACGATGCCGATGGACAAGCTGTTACACTACAACGACATGGTGAATGCTCGTTCTCCCATACTGAACATGCATCTATCGGCTGATATCAACCGGCATGGCTCGAGTCCGTCGTACGAGCGCGCGTCCTGGGATGACATGCAAGCCCCGAACGAATATGAAGACGATGCAACTGTACTTAAAAAGATTAAGCTAAAGAGTGAGTTGAAGCAGGAAGAAGGACAGTTTGTCTGCGACCAATGCGACAAGACGTTCGTGAAGCAGAGCTCCCTCGCTAGACATAAATATGAACACTCAGGTCAGCGTccgtacaagtgtgtgcagtgtccgaaagcgttcaagcacaaacaccacttgacagaacacaagcggctgcacacgggcgagaagccgttccagtgctgcaagtgtctgaagaagttctcgcactccggctcctacagccagcacatgaaCCACAGATTCGCGATCTGCAAGCCGTATCGGGATTAA
Protein Sequence: MSWVLLVVAVRPLASSGGADGKPAEEEEERSGSPLGPGGPFACSQCRGAYPTRDQLERHETLHAPSTQVDTTLKYTCKICHKSFANVYRLQRHMISHDESAQLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRANALAASQLNNNIAPNGNSFFPILPKYNEAAAFFASMSSQENNFHRPPLGQPGMNPFYMPPGMPMSPATGITPYSLPTSLSQLFEQLASSQYPQRKIENPASPKQTSPHPTNSEDMIEEVTEEDDKRSEGSADLVMDIEDDDAIKKEQEDRENEFRSPAHNYESVPLNNNGNEVDNKHSGFNTILESVSASVTKHFFRTNIETLSPISGNVYPSRESPQTPQVVIKEEPEVEDPQRCLKCNATFASKSDLLDHEKVVCNGLFRKHESLAAQVAETVALNRLEMEMEMRTSAQSGVSASEDEDYGREDRDEKESIHDSDRKIRVRTALSEEQQAVLKEHYSINSRPNREEFKRIAQQIGLDNRVVQVWFQNNRARVRRMIQSTAVSDQPLDLSTKKSNPSVTSSPSPSPCSISVTHSDSEEAVNLSQKSSRSTTPLRPNYMNAYPHSNCSSSSFNDFRLSPSPSETLNCQKRLLHQKLNPTMPMDKLLHYNDMVNARSPILNMHLSADINRHGSSPSYERASWDDMQAPNEYEDDATVLKKIKLKSELKQEEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCVQCPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698162;
90% Identity: iTF_01219675;
80% Identity: iTF_00737358;