Gpyr014134.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- lolal
- Assembly
- GCA_947859175.1
- Location
- OX401850.1:9230318-9237235[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-16 3.3e-13 49.3 0.0 1 42 348 390 348 393 0.94
Sequence Information
- Coding Sequence
- ATGGCCCAGCAATATAGTTTAAAGTGGAATAACCACCAACCAAACTTCATTTCAATGTTTGGTATGCTAAGGAATACGCAGGCGCTGGTGGATGTTACCCTAGCAGCGGAGGGCCAACATCTCCCCGCCCATAAGGTGGTCCTTTCGGCTTGCAGCCCATATTTTCACTCACTGTTTGTTGAAAACCCATCGCAGCACCCCATAGTGATCCTCAAGGATGTAACATTCTCTGATCTCCGCACTATCGTCGACTTTATGTACTATGGCGAAGTCAACATTACGCAAGAGGAACTGCCTCAGATGCTGAGTTCCGCAAAATCACTGAAAGTAAAAGGTCTAACAGCAGTCATGCGTTCACAATCGTCCGATTTTCCGTACGAGACGGCCGGTGAGACTTCTGGCGAGCCGACCGGCGAATCGCTCGGCGAACAGGCTGAGATGCCCACTGAGGCACTGGACCCGTCGAATGACTCCACTGGAGAGGGCGCACAGCGGCGTCCCTCGTCTTCATCTAACAGCTCGCCGGCGGCCAAACGAAGACGGCGCAGGCGAAGCTCGACCGTGCCGACTGCTCCTAATATGGTGGGTGAAGAGAATCCTGACGATCAGTCGTTGGAAATAGCGAGGGACGGGATCACTTTGAGCAGTGTGCCGCGGCGTCGGGATTACTCACACGACGAGAACGCCACGCAACAAAGCACGGAGCCTCAAAACATAAACACAGATGAGCTGCACGTGAATCAGAACTCCGCCAATATGACACCAGTTGGAGGTCAGTGGAGTATGATGGAGCACACATACCCGCGATATACGAATTCGTGCTTCGGCGGCGGGCTGGGGGTCGAGGGCGGCGGCGGCAGCAGCGGAGTTGGGGGCATGTACATGGGAGGCATGATGCACACGCACGGCAATCCGCACATGGAGGATGAGATGTACGCGACGGCACCGGGGCCGAGCTGCGCGCCGCAAGCCGCGCCTCTGGCACTGGCGGAGCAGCCGCCCGCCGCGCCGCAGAAGCGACGCCGCACCACCAACCCCCAGTCGGAGGAGAACTTCCAGCGCGCGCTCGAGGCGGTGCGCATCGGCGGCATCGGCTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACCGCACGCTTTGGCTCGAATACAAGAAGAAGGGATACCCTAACAACCGGCCGAGTATAAAGAGTCGCATCAAGCGCGAGCACGCGACGCCGCCGCCGCCGCACAAGGAGGAGCCGCCGGCCGCGGAGCCGCACATGGCGCTGCTCTGTCACCCCTCGCACCCGCACGCCAGCCATCACCTCTCCGTGGGCTTCGTGGACTCGCGCCCGCTCGACCTGCCTCTGCAGGGCATCAACATCCTCGGTGGACTCAACTTCAACTCGATGCAATAG
- Protein Sequence
- MAQQYSLKWNNHQPNFISMFGMLRNTQALVDVTLAAEGQHLPAHKVVLSACSPYFHSLFVENPSQHPIVILKDVTFSDLRTIVDFMYYGEVNITQEELPQMLSSAKSLKVKGLTAVMRSQSSDFPYETAGETSGEPTGESLGEQAEMPTEALDPSNDSTGEGAQRRPSSSSNSSPAAKRRRRRRSSTVPTAPNMVGEENPDDQSLEIARDGITLSSVPRRRDYSHDENATQQSTEPQNINTDELHVNQNSANMTPVGGQWSMMEHTYPRYTNSCFGGGLGVEGGGGSSGVGGMYMGGMMHTHGNPHMEDEMYATAPGPSCAPQAAPLALAEQPPAAPQKRRRTTNPQSEENFQRALEAVRIGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHATPPPPHKEEPPAAEPHMALLCHPSHPHASHHLSVGFVDSRPLDLPLQGINILGGLNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737598;
- 90% Identity
- iTF_00737598;
- 80% Identity
- iTF_00737598;