Gmel002458.2
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292284.1:6735029-6744296[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3.1 2e+02 3.2 0.3 1 23 54 77 54 77 0.95 2 20 0.077 5 8.2 4.8 1 23 84 107 84 107 0.97 3 20 0.0024 0.16 12.9 0.4 2 23 219 240 218 240 0.97 4 20 3.6 2.3e+02 3.0 1.9 1 23 246 268 246 269 0.94 5 20 0.24 15 6.7 3.4 2 22 505 525 504 525 0.95 6 20 7.9 5.2e+02 1.9 1.2 1 23 623 645 623 645 0.79 7 20 0.62 40 5.4 0.3 2 23 783 804 782 804 0.96 8 20 0.019 1.2 10.2 0.7 2 23 880 901 879 901 0.96 9 20 0.18 12 7.1 0.6 1 23 909 931 909 931 0.97 10 20 0.14 8.8 7.5 3.4 1 23 966 988 966 988 0.95 11 20 0.00076 0.049 14.5 4.6 1 23 996 1018 996 1018 0.99 12 20 0.27 18 6.5 1.5 1 23 1103 1125 1103 1125 0.98 13 20 1.2 76 4.5 3.5 1 19 1181 1199 1181 1203 0.93 14 20 1.4 89 4.3 0.3 2 23 1210 1231 1210 1231 0.95 15 20 0.013 0.83 10.7 0.4 1 23 1294 1316 1294 1316 0.93 16 20 0.041 2.7 9.1 0.5 1 19 1322 1340 1322 1341 0.96 17 20 0.0077 0.5 11.4 2.6 1 23 1434 1456 1434 1456 0.97 18 20 0.00019 0.013 16.4 1.4 1 23 1462 1484 1462 1484 0.99 19 20 0.36 23 6.1 2.1 1 23 1575 1597 1575 1597 0.96 20 20 0.0032 0.21 12.6 3.7 1 23 1608 1630 1608 1630 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCGCAAGTCGGCGAGGTCGTGTCTCTTGTGCGCCCCTTCGAAGGTCGCTTGAACGGCGACGTCTCTTCAGAGGCCTCTTCGGACGCTGCGGAAGAATCAGAGTTGCCGCAGTGTAAAATAAGGAGAAATTATAACTGCGCCAAGTGCACGTTCTACACTCAGAATCCACGAGCGTATCTTGTGCACATACGGGACGTTCACTttgaaaaaattaagatatacgATTGTCCACATTGTGTTTACGCTTCTAGGCATCATCAGAAACTTTCAAGACATATAAAAATGGTACACGTAGCGCCTAATTCGGCGTCAAACGATAAGGTGGAGGAGGTGCAGCCACCAATTTCAGACACAACTGAACCTTTAGAGCGAATTGAAGACTTGCTTGAAGAAGTAGAGGAGTGTGAAGATGCCGATATGGAAGGCGAAGACTGCAATGAAGAGACATTTACACGGACCACAGACGCTGAAGTCGAAGGTGACAGATCAtcgtcaaataatataaatcaatcgGATGCAACAAAAaacaagaataaatatttctcatgCGTTAAATGCAATTATGTTACACACATAAGAGCGAGATTTACTAAGCACGTAAAATACCATTCCATGCCAATGATTAAATGTGCTATATGCGATTTTCGTACCCCATATAAATGGAATTTGGATCGTCATATGAAGAACCACGGAGGTAGTGGCAGCTTCACCTGCTTTATGTGCAACTTTACAGCGGACATTAAGCAAAGTCTGACAGTACATGAGATGAATCACCACACTCCGCCCGTAGGCCAATCGGTGGTAATTCGTCGCCGCAATCGGGTGGGCGCCAGCGACGTACCGGTTGACAACATATCAATGTTTATCACCAAGGAGGAAGAAGGGAGTGGCGACTCACGATCCTCACACTCGGCCTCGgATCTATTACAGTATGCAGAGAAAGAAATGATATGCTGCAACAGCGACTCTAATGATACTGAAATGACTGTCAAAAGGGATATAGAAGATGTACAAAATCAACATTCACCTGATGCTGCTACAGATGAAgctaaatatcaaaaacaaagcAGAAAAATTCCCAGACCAATACCCCAACTGATACCATTAAACTCATCGACACCAAATCAGAGCAAAGCCTGCAGTGGGGAACCACctgcaaaaaaatttaaagaatcagCAACAGAATCAAATGATTCCGTTAGCAGTAAATTTGAAAATCTACCTGCAGATATCACATTGATACCTGTAACAAATACATCAACAGCTACAAAGGACACTATAGTGCGTAAAAAAAATGAATCCTTCTTTGACAAATTAAAGGAAAGATTGCTTGCAGAAACAGGGGAAGAAGGCTCgcttatatgtaaaaattgtgGTTTCGAAAGCAAATGTTTATCTGAACATTCAGTACACGAAAAAAATTGTTCTTCGCAATTAAACCGCATAGCAACAAATACGCTACATTCAACCCTGGGCTCAACACGATGCCAAAATTGCAGGCATAGGTGCAAATCAAGTGCTGATCTTTACATCCACATGCAAACATGCAGAAAAAATCAAAAGAGAGATGAACAGTTtatggatattaaaaataaagaagacaGTCAAACTACAATATCTACCCAAGAAAAAGATGCTGAACCACATCCAATGGAAAATGTTGTATTCGTATGGAATAATATAAATCATGATCCTAACAAGTTTGATACACCACTTGGCATTAATATCAATGATGATTCTACTCTACCAGAACCAAATAGAAACTATGATACTGAGATCGTGGATGATAATGAAGGTATGAATTTGTCACCAAGTCAAGCTGTTggcaaaaaagtatttaaatgccCACATTGTGAATTTTGGGCTTCAACTGCGTCCAGATTTCATGTCCATATCGTAGGGCATTTAAACAAAAAGCCATTTGAATGTTCCCTGTGTAAATATAAGTCGAATTGGAGATGGGATATTActaaacatattaaattaaagtcAGCTAGAGATCCTGAGCATAACGAAGCAAAAGTGCTTATGACTGACGAAACAGGTAGAAGAAACTATAGCAAGTATAATAAGTTTTTAGCAATGTCAATTCTGAATGAAAATGGCGAGAATGAATttcattatttagatattaatgCTTTAACTGACCCGTCTATGGATGTCGACGAAAGCTTTAATGATGGTTCTGAGAATATGAATGGTTCAGTGTCATTAGATATGCAACCTctcaatttacaaacacaacacgGGGATCAAAGATTACAATCTATTGATAGTAAAATTTCTGACTCTAAGAAACCAAAGAAAACCATGTGGAAATGTAAAAAATGCAATTACAGaGATCCATCTAAAGAAGCTTTATTGGATCATGTCCGGGAACATTCTAAAGCTGACGGAAATTCTGAAGAATCAAAATTGATGAAGAAACCAGATAATCTTCCAGATCCAGCAGATCTCGCATATCGCTGTGGACACTGCAATCAGTTATCTAATTGGAAACACGTTATAcagAGGCATTGTCGATTGAAGCACGATGGAGTGATAAGAGTCATCACAACAATTAAACCAAAATCGGATACAACATCAACAAATGATATCACCAATGACACGTGCACTAAGTGTCCTTTTAAAACAAACGATAAAAAAATGCTCGCAGCGCATTTACAACAACATCAACCTTCTGCTCAGTCTATATTCAAATGCTACTTTTGTCCTTTCTTTGTTAAGGATGAACAAGAATTAGTCCAACATTTACTACTGCACGGTGTAACAGAACCAGAAGAATATATCTCTAAAGCAATGGGATGTAAATCGCCATTGCCAGAACTACAAGGGGCTACATCAACCCCAAATTCAACGAAACGACACAGATGTACAGAATGTCCGTACGAAACAAATAGCAAATCACAGTTTATGTATCACGAACAATTTCACAGACTTCCAGCTGACACGCCATATAAATGTCCGCAATGTAACTACAGTGTTTCTAAAAGGCATTTGTTACATCAACATTTAAGAGTTCATGGTATTCTCACAAAGAAGTCAGAATCAGAAGCAGAACTGGAAGCAATGTCAACCAATTCTAGTAGAACAGAAGATAAAACGGACGCATATGTACCTCTAGAGGAAATACCTTATGTATGGGTATCGGCAAAAAATATGTTCCATAAAATGTACAAGTGCCGTTATTGTTCATATGTAAATTCGCAAAAATGCAAAATACCCTACCATGAAAAAATACACtgcattatttttgaaaatagtgaaataacagtatacaaatGCTTGGAGTGTAAATTTATATGTGATAATGCAATTAAATTAGCCGAACATTCTAAAACACATGGTGAAATATATGGGCGCATTTGTTGTCCTGTTGAGTTGGATATACCAGACGACGAGCAAATTGAAAAACTGCGAAAAGTAATTGAAGCTGAACAAACAGCACCCACAAAAGACTTTATAAAGGAAGACGACATATCCAATGGAAGTAAGGAAgtcaaaatgttatatttttgtcaaaAGTGTCCATCTAGATTCTTTTCATACGATGACTTAAAAAATCATGATAAATTTCATGAATCATCATTTCCAAACACATGTAAAAGTTGCGATTTTTCTGCCCCTGAGGAAAGTGAGTTAACTTCACACACTTTTGTCCATTCAGACGAATATCATACAAAAacgaaaatgttaaaatttatgcACAATTCACATGCAGCTTATTCACAAcctcaattaaaattaattcactgTGCAACAACATCAGAAATAACATGGGTAGTTTCGGATTCCGATAAAGAACATgacaatatatctaataataaaaaaataaatgaaccaaAACAGTACTTATGTAAAGAATGCCCAGCGAAATTTTTCAAAAGTTCCGCATTAAGCTATCACATGGGATTACACGGTGGTGATGGGGAACATAAATGCAAAAAATGCAATTACGCAGTTAAAAGTATAGGAAATTTGGCGAAACATGAATGGCTTCATAAggctgaaaataaaataccaacTTGTGACTACGAGTCTAGTGAAGATATGGATTACAAGAATATTCCATTATCTGGAACTGATTTATTTCAAAGAAAAACAGAGGCCCAGAAAAGGgttttaatagataaagataaattagttAAACCAAATGATCACTTCCCACCTGTACTTCAGGCGGATCCACAATTTGGTTACTTGATGCATGGTAATCCAGAATTTATATATCCAACTTATTTAAAGAATGGTCGTCAAAAAGAAAAACGCTATAAGTGCCATAAATGTCCTTCAGCTTTTGAAAAGAGAgaacaatataaaattcatttatctTTACATGGTTCGAAACAAAGGTATAAATGTGAACTTTGCGATTATTCTGTAAAATATTATGCTAATTATGTTCAGCATATGAGAAAACATCAAATGAATGATGAAGCCCAAGCAGAAAGAAAAAAAGGCAATCATGATTTTAATGAAGGAGGAAGTCATGAAGATAAACAGGACGACAGTggtgataatattaaattagccaTTAAAACGATGCCAAAAGGAACAGCCAGAAGCGATTTTCAGCAATTCTCAATAAGTGACCAACAAACTCTACGACTACTACAGCGCAGACGCTCCATTAATAGCGCTGGAAAAGATCCAAACCCAAGTGAAACGGCACCAACTAAAGATCGGAAGTTGCATATGTGCTTATTATGCCCATATACGAATCAGAGACAAGATGCCTTAACAAATCATTACAGAAGACATGATGATAGTGACATTCTTAATGCAGGGAGCCATAAGTGTTCCTACTGCGATTTAGTTGTAGTTCAGTCACACTTCCTCCGCGAACATCTGAAAACtcattttaattatcaaaaaactTTAACTCCAGAATGCTTTGTGGCCAATGAAGGCGTAAGTTTTACTATTACAAAAGTGGACGATGAAAATATATCTTCTGATCTCAAGCTAGatttaaaacacaaaattgatgTGTCcaatgaagaaaaaatatttgtaaaaataaaaactggagAAGTTTTTGCAGAATAA
- Protein Sequence
- MLQQMSSPPSAQVGEVVSLVRPFEGRLNGDVSSEASSDAAEESELPQCKIRRNYNCAKCTFYTQNPRAYLVHIRDVHFEKIKIYDCPHCVYASRHHQKLSRHIKMVHVAPNSASNDKVEEVQPPISDTTEPLERIEDLLEEVEECEDADMEGEDCNEETFTRTTDAEVEGDRSSSNNINQSDATKNKNKYFSCVKCNYVTHIRARFTKHVKYHSMPMIKCAICDFRTPYKWNLDRHMKNHGGSGSFTCFMCNFTADIKQSLTVHEMNHHTPPVGQSVVIRRRNRVGASDVPVDNISMFITKEEEGSGDSRSSHSASDLLQYAEKEMICCNSDSNDTEMTVKRDIEDVQNQHSPDAATDEAKYQKQSRKIPRPIPQLIPLNSSTPNQSKACSGEPPAKKFKESATESNDSVSSKFENLPADITLIPVTNTSTATKDTIVRKKNESFFDKLKERLLAETGEEGSLICKNCGFESKCLSEHSVHEKNCSSQLNRIATNTLHSTLGSTRCQNCRHRCKSSADLYIHMQTCRKNQKRDEQFMDIKNKEDSQTTISTQEKDAEPHPMENVVFVWNNINHDPNKFDTPLGININDDSTLPEPNRNYDTEIVDDNEGMNLSPSQAVGKKVFKCPHCEFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMSILNENGENEFHYLDINALTDPSMDVDESFNDGSENMNGSVSLDMQPLNLQTQHGDQRLQSIDSKISDSKKPKKTMWKCKKCNYRDPSKEALLDHVREHSKADGNSEESKLMKKPDNLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIRVITTIKPKSDTTSTNDITNDTCTKCPFKTNDKKMLAAHLQQHQPSAQSIFKCYFCPFFVKDEQELVQHLLLHGVTEPEEYISKAMGCKSPLPELQGATSTPNSTKRHRCTECPYETNSKSQFMYHEQFHRLPADTPYKCPQCNYSVSKRHLLHQHLRVHGILTKKSESEAELEAMSTNSSRTEDKTDAYVPLEEIPYVWVSAKNMFHKMYKCRYCSYVNSQKCKIPYHEKIHCIIFENSEITVYKCLECKFICDNAIKLAEHSKTHGEIYGRICCPVELDIPDDEQIEKLRKVIEAEQTAPTKDFIKEDDISNGSKEVKMLYFCQKCPSRFFSYDDLKNHDKFHESSFPNTCKSCDFSAPEESELTSHTFVHSDEYHTKTKMLKFMHNSHAAYSQPQLKLIHCATTSEITWVVSDSDKEHDNISNNKKINEPKQYLCKECPAKFFKSSALSYHMGLHGGDGEHKCKKCNYAVKSIGNLAKHEWLHKAENKIPTCDYESSEDMDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNHDFNEGGSHEDKQDDSGDNIKLAIKTMPKGTARSDFQQFSISDQQTLRLLQRRRSINSAGKDPNPSETAPTKDRKLHMCLLCPYTNQRQDALTNHYRRHDDSDILNAGSHKCSYCDLVVVQSHFLREHLKTHFNYQKTLTPECFVANEGVSFTITKVDDENISSDLKLDLKHKIDVSNEEKIFVKIKTGEVFAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -