Basic Information

Insect: Galleria mellonella
Gene Symbol: -
Assembly: GCA_958496185.1
Location: OY292311.1:3836188-3845656[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.5 2.3e+02 3.0 0.3 1 23 309 331 309 331 0.92

2 13 0.26 17 6.6 1.2 1 19 386 404 386 406 0.95

3 13 2.9e-05 0.0019 19.0 3.1 1 23 425 448 425 448 0.96

4 13 0.0096 0.63 11.1 0.2 1 20 486 505 486 507 0.93

5 13 6.3 4.1e+02 2.2 0.7 1 23 542 567 542 567 0.94

6 13 3.2 2.1e+02 3.1 2.1 1 23 816 839 816 839 0.96

7 13 0.26 17 6.6 0.1 2 23 845 866 844 866 0.91

8 13 0.0032 0.21 12.6 0.2 2 23 999 1020 998 1020 0.97

9 13 8.1e-07 5.3e-05 23.9 2.3 1 23 1026 1048 1026 1048 0.98

10 13 0.02 1.3 10.1 3.4 1 19 1053 1071 1053 1076 0.91

11 13 0.0001 0.0067 17.3 1.4 3 23 1084 1105 1083 1105 0.96

12 13 0.012 0.75 10.8 0.8 1 20 1112 1131 1112 1131 0.92

13 13 0.028 1.8 9.6 0.6 3 23 1147 1168 1146 1168 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.5	2.3e+02	3.0	0.3	1	23	309	331	309	331	0.92
2	13	0.26	17	6.6	1.2	1	19	386	404	386	406	0.95
3	13	2.9e-05	0.0019	19.0	3.1	1	23	425	448	425	448	0.96
4	13	0.0096	0.63	11.1	0.2	1	20	486	505	486	507	0.93
5	13	6.3	4.1e+02	2.2	0.7	1	23	542	567	542	567	0.94
6	13	3.2	2.1e+02	3.1	2.1	1	23	816	839	816	839	0.96
7	13	0.26	17	6.6	0.1	2	23	845	866	844	866	0.91
8	13	0.0032	0.21	12.6	0.2	2	23	999	1020	998	1020	0.97
9	13	8.1e-07	5.3e-05	23.9	2.3	1	23	1026	1048	1026	1048	0.98
10	13	0.02	1.3	10.1	3.4	1	19	1053	1071	1053	1076	0.91
11	13	0.0001	0.0067	17.3	1.4	3	23	1084	1105	1083	1105	0.96
12	13	0.012	0.75	10.8	0.8	1	20	1112	1131	1112	1131	0.92
13	13	0.028	1.8	9.6	0.6	3	23	1147	1168	1146	1168	0.93

Sequence Information

Coding Sequence: ATGTCGAAGAAATATACTCAACAATGTGGACTAGAGAAATCGTCGCAAGTTTTTGCAAAGGACGAAAATAATAGTATGTCACAAaatcaggttataaataataaatctcctAGGTTATTAACTGAATCAAACGAAACACCACATAATTCTGAAAGTTCACTAGATATTGTTGAATCATTACCTTCAATTACCAATTGTGATATAAAAGTTGAAGAATTTGATGATAATGTAGTAAATATTGATGATTGCAatgtaaaagataataatactGCAAATAATGAAGCGgacagtgatgatgatgaagatataGAGCTTAtagaacaagaaataatcattgagAATGAGATGCTGAAgagtacatttaaaaataatgattcaCTCCAAAAATTATTGGAGGAGTCTGCAAACAATTTATTGAATACAAACTGTGGTGATTCAATTAATGATTCATACACTTCACTCTACAAAGTGTTTTCGTTTTCATcagataatattgttaataaatctaCACACAATGATAATCACCATATAGATACATCTCTAGGTATGACTAATGCAAACATTGACAGTTCAAAGCAAAATAgtcaaaattctaataaaatccCTGATGTTAGCCAGCATAAAAATACTTCTATTGCTGCTGATGAAACTGTTCCAGCCAAAGAGATTGACCTGTCTGTTAAAGGATTAAAACAACTGTGCCTAgagttggatgaaaatgaaatgttcAGGAAAGCTGAGATTATTAGAAACACAGCGTCCAATGTAGCAGATAGAATATTAGCAGTGGAACTGCTTAATAACTGGGGGCGCGTTAAACATGCGCCTTGCAAGCCAACAATACAGGAGACTTTGTTGCAGGACGCTCTCGACGAGTGGAAAAACTGGAACAAACTCTCTAGACACAGGGAAATACCATTGACATACAAGTGCTACGTTTGCAAGATTGCGTATTGGCGTTTGACTCCGTTCCGGGAGCACATAGCTCAGCATGTAGACATTAAAATTGGCTGTGAGTTTGTACTTTACGAGTCTCACATAAAAGCGTACACCGTAGAAGAGGACACCATCAAGAGTTTCCCCATCGAAGGCAATTGCTTTCAGTGTCACAAAGGATATGAAGCGCATCCCTCTTTGGGGGGAGAGTTTAAACACTATAAATGCTCATTTTGCAAAGAAAACTTTTTCACATGCATCGCATTGATGATCCACGAGGAGCCATGCAAACATCTGAAGAAGAAGCGTCTCATGCATGTGTCTGATATAAATTTGCACAAGTGTAAAGTATGCCCAATGAGTTTTTACAATAAGGAACAATTAAATAAGCATTTAAAATTGTCCCACATGGTATGGTCTGATGTACCTATTCTGTCAGGGACCAAACTTTGCACTCTCTGCAATCAGAGGTATTCTGTATTTTTAATGCacatatgcaataaaaaaatggcGCCAAAATTCATATGTTCGTTTTGCAATCGAAGATTTCCCTCGCAAAAGATGTTGGATTTACATATAGATATGTTGCAAAGCAATCACCAGTGTCGGATATGTAATTTGACGTTAAAGAAGAGTTGTATGGAGgtcatacatttattaatacacaGCAAACGGTTCATGAAAGTGTATAGGTGCGCGTTGTGCAAGGATAACAAGATATATCCCAAGTTAATAGATATGAAAAAACATAAGAAAATGCttcataaagaaaaatttatttcccataatattttgtatgatattatgttaataataaaaaatgttgaagAAAAACAGAAATATGTAAAAGAAGTTAAAACAGTTGTTGAGCAAATAAGCGCATCCGATGAGCAGAGATTTGCAATCGAAAATTTAATGAAAGAGATGGAAGATCCAAGTGATCAAAACGAAGTAATTCAGACGCCAAATGTGGAAATACAAACTGTAAATGAAAGTATTTTTGAAACTGCTGAAATTGACAATAGAAAcgtaaatattgttatagatGAAGAACAAACACAAGagtatgataataatgaagtaataatcgatagtgataccgagaatgatgatgattttaatgaaaatgcaattgtaaataataattttgataatcacCAGACTGACAACGTTGAGGTTGATGCTGAAGTGCGTGATGAGAAAGAAATAGAAGTAGCAGACGGGTGTAGTTATGAAGAATCGAATCATTATGTATCTAACATGCTTCAAAAGCCTGGCTTTTTCGTCGAAATCAAAGTGGAAAATAACAATGAACATCAAGGTGTGAATTCAAATGATATAATAGGTTTAAACAATGATTTAACAGAGGATACTGTTGTGAATGAACCTAGAAGAAATCTTTACAAATGCGGTAAATGTAAACTAGATATGGAGCACAAAGAATACCAAAAACATAGGAGTTCATGTCCTAGCAGAGATGGAGTTAAATTTAAACGTTTAGAGAAAACGTATCACTGCAGCAAGTGCACGGGGAATTATATATCattgaagaaatatataatacatttgtcAAAAGTGCACAATCTCGAGCGGTTGGTTTGTGTTCTATGCGGTTTGAAATTCGGCACGGATCCAAATCTGAGGATGCACTTCGATTTGCATATTAGACGATTGTATTTGAGAGTTAGATGTTGCAGTAAAGAAGATAATGTAAACAATACTATAGTGCAGTGTAAGAAATGCAGGTCCAATGTAGCTGGggataaattattttcacattGGGAATCGCATTTTGTAATGCCAGATCAGTCGGTAGTTAAACCGAGCGAACCGGCTGCATTACCAGCTCCCCTCTACGAGGGTGCTTTAAACCCGACAGATTTGAAAAATCTTATTACatATTTACAAATGGATATGACAAACCGGCATATGTACAAGATGATAAAAAGGTGCCCCTGCTGCCGCAGATACTTCAGTCGTGCTATTGTAAGCAAAAGACATTTTGTGGAGCATTTGCTAAGAGACGCGTATGCATCGATCGAGAGGAACGGCGGATTGAAATGTCAGATTTGCTCGGAGATATTCGAAGGGGATGACAAttacaaaGTCCATATGAGGGATCACGGCTTCCTTCCCGTCTACATGTGTGAAATATGTAACAAGTCTTTCAGCGATTCAAGTAACTTCAGCAAACACAGGAAACTGCACGACCAGTCTGTGCACGTGTGCCAGCTTTGTAAAAAGAAGTTTCAACATAAGGAGTCGCTTTTGAAGCATAACGTCGAGGTGCATGAGAAGTCCAAGCCCAAGGCCTGTTCATACTGCAGCACCACATTCTACACCGAGTCCAGTTTAAAAAAACATGTCAGAAACAACCACGAGCGACCTCTGCCGGCGTTCCGTTGCAAGATATGCAAGAAGGTGTTCCCCACTACTAAATCAAAGCTCGAACACATGTGGGCGGCACACCGACTGCGGTGTGTCCGAACACAGAATGCCAACTGTCCAATATGCCATGAGCCCTTCAGGAAGTACCAGGACGTGAAATATCACCTGGAAAATGTACACAGTATGGAAAAATCTACTGCGGCATTCTTAGTAAAGAAGCAAGCGCGCAAATACCAGGCGGCTAAAAAGAAACGCGAACTGCTCATACAGAACTAG
Protein Sequence: MSKKYTQQCGLEKSSQVFAKDENNSMSQNQVINNKSPRLLTESNETPHNSESSLDIVESLPSITNCDIKVEEFDDNVVNIDDCNVKDNNTANNEADSDDDEDIELIEQEIIIENEMLKSTFKNNDSLQKLLEESANNLLNTNCGDSINDSYTSLYKVFSFSSDNIVNKSTHNDNHHIDTSLGMTNANIDSSKQNSQNSNKIPDVSQHKNTSIAADETVPAKEIDLSVKGLKQLCLELDENEMFRKAEIIRNTASNVADRILAVELLNNWGRVKHAPCKPTIQETLLQDALDEWKNWNKLSRHREIPLTYKCYVCKIAYWRLTPFREHIAQHVDIKIGCEFVLYESHIKAYTVEEDTIKSFPIEGNCFQCHKGYEAHPSLGGEFKHYKCSFCKENFFTCIALMIHEEPCKHLKKKRLMHVSDINLHKCKVCPMSFYNKEQLNKHLKLSHMVWSDVPILSGTKLCTLCNQRYSVFLMHICNKKMAPKFICSFCNRRFPSQKMLDLHIDMLQSNHQCRICNLTLKKSCMEVIHLLIHSKRFMKVYRCALCKDNKIYPKLIDMKKHKKMLHKEKFISHNILYDIMLIIKNVEEKQKYVKEVKTVVEQISASDEQRFAIENLMKEMEDPSDQNEVIQTPNVEIQTVNESIFETAEIDNRNVNIVIDEEQTQEYDNNEVIIDSDTENDDDFNENAIVNNNFDNHQTDNVEVDAEVRDEKEIEVADGCSYEESNHYVSNMLQKPGFFVEIKVENNNEHQGVNSNDIIGLNNDLTEDTVVNEPRRNLYKCGKCKLDMEHKEYQKHRSSCPSRDGVKFKRLEKTYHCSKCTGNYISLKKYIIHLSKVHNLERLVCVLCGLKFGTDPNLRMHFDLHIRRLYLRVRCCSKEDNVNNTIVQCKKCRSNVAGDKLFSHWESHFVMPDQSVVKPSEPAALPAPLYEGALNPTDLKNLITYLQMDMTNRHMYKMIKRCPCCRRYFSRAIVSKRHFVEHLLRDAYASIERNGGLKCQICSEIFEGDDNYKVHMRDHGFLPVYMCEICNKSFSDSSNFSKHRKLHDQSVHVCQLCKKKFQHKESLLKHNVEVHEKSKPKACSYCSTTFYTESSLKKHVRNNHERPLPAFRCKICKKVFPTTKSKLEHMWAAHRLRCVRTQNANCPICHEPFRKYQDVKYHLENVHSMEKSTAAFLVKKQARKYQAAKKKRELLIQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -