Gmel022186.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- ZNF131
- Assembly
- GCA_958496185.1
- Location
- OY292311.1:2611141-2620491[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.01 0.68 11.0 2.9 2 23 196 217 195 217 0.97 2 11 0.0011 0.069 14.1 0.8 1 23 224 246 224 246 0.95 3 11 0.063 4.1 8.5 2.8 1 23 250 273 250 273 0.96 4 11 0.0017 0.11 13.4 1.4 1 23 278 301 278 301 0.97 5 11 0.00034 0.022 15.6 1.9 2 23 306 327 305 327 0.97 6 11 3.6e-05 0.0024 18.7 1.2 1 23 332 354 332 354 0.98 7 11 0.095 6.2 7.9 0.2 3 22 364 383 363 387 0.92 8 11 2.1e-05 0.0014 19.4 3.3 1 23 395 418 395 418 0.97 9 11 0.00086 0.056 14.4 2.3 1 23 424 447 424 447 0.96 10 11 1.7e-05 0.0011 19.7 1.6 3 23 458 478 457 478 0.97 11 11 0.00089 0.058 14.3 0.7 2 23 485 507 484 507 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAAATTAACTCATCtagtgataaatataatttatgtagcaTGTGCTTAAGCGCGGATCGTAAACTCTGCCGTGCCGGAAACATTGCATTTATTGATGAAATTTCGAAAATTAAACTTATAAAGtGTTTGGATATCTGTGAAATGGCAGTGTGTTGGGAGTGTGAAGCAAACATGaagaatattattgcattcAGAAATAAAGTATTGAAGGCTCAGTCAGTCATCAGGGATCTGATGAAGAACAGTGTATGTTGCCAGCCTGTACAAAGCCTTTCTCGATTAAAACCTACTATAATCGATAATGCAGAAATAGTCATGTTACAATCCTCGATTGATGTGAAAgtcgaaaatatttttatagaagatCCTGATGTAAGTGAAGCATGTGATATACCTTTAGAGAATATTAAAGAAGAAGATGAAGAATATGTAGGAAATAATGAAGAAAGTAAGGACATTTCAATATGTGATGAAaatacagatcaaaatatatatacagtagtAAGTTTGAGTGAAGAAGAAATGAGAAATGAAAGAGACAAGAGGAGAACCAGCAGCAGATTCAATAAATGCACAGTGAAGTGTGTGAAATGTgttgaaatattttctaataccaAGTGTCTGTATTATCATATGAGGAGACATGATAAGgACGCAGGTGAATTCCTATGCAGCATCTGTGAACAGCGATTTACACTTGAATCTGAAATGACGAATCACCGCTTGACGCATTATAGGCATTACAAATGCCGGATATGTGAGCTGGAGTTCCACAATGAAGACTTGATTCTGCGTCATCACCGCGACAACCACAGCGAAAATGGTTACGCGTGTGAAGTATGCAACACCGTATACCAAACGAAGAGACTGTACCAGTTACACCGACGCAGCAAACACAAGGGTCGCAAGTCGTGCCCCACGTGCCATAAGGAACTGGGACCCAACACTAATCTCAAGAAGCACATGCTTACTCACACGTCTGTGACATACGAATGTGAGGTTTGTAACAAGAAATATAGAAACGTTTGGAGCTTACGCACACATAGACAGTCGCACAACGTGCAGaagaACGAGGCGGCGTACTGCGCGGAGTGCGATGTACAATACAAGACAGTGTACAGTTACTGGACGCACGTACGGACCAGTCTCAAACATGTCTCCCTCGAGGATCTCAAgtataaatgtaaatactgCAGCAAACGCTGCGCGTCCGCTTCGTCTCTCAAGTATCACATGGAATCGGTACACACGAAGGAAATGAACTATTCATGCAAACAATGCGACCAAgcATTTAATACCACGAAGAGATTGCGCGTTCACGTTAGATTCAAACACGAAGGGAAATCAAAACCGAAGAACAAAATTTGCTGTATTTGTTCTAAAGCGTTCTCGACGAAAGTAGGTCTGCAACAGCATATGAACTCGCATACTGGTGCCCGTCCGTCCGTTTGTAAGGTCTGCGAAGCGTCATTCTCTCATTCTGGCGCATTATATACCCATACCAAACTGTTACACAAGAGACAGAAGCGCCAAAAACCGGATAAAACCAGTCAAAACTAA
- Protein Sequence
- MEEINSSSDKYNLCSMCLSADRKLCRAGNIAFIDEISKIKLIKCLDICEMAVCWECEANMKNIIAFRNKVLKAQSVIRDLMKNSVCCQPVQSLSRLKPTIIDNAEIVMLQSSIDVKVENIFIEDPDVSEACDIPLENIKEEDEEYVGNNEESKDISICDENTDQNIYTVVSLSEEEMRNERDKRRTSSRFNKCTVKCVKCVEIFSNTKCLYYHMRRHDKDAGEFLCSICEQRFTLESEMTNHRLTHYRHYKCRICELEFHNEDLILRHHRDNHSENGYACEVCNTVYQTKRLYQLHRRSKHKGRKSCPTCHKELGPNTNLKKHMLTHTSVTYECEVCNKKYRNVWSLRTHRQSHNVQKNEAAYCAECDVQYKTVYSYWTHVRTSLKHVSLEDLKYKCKYCSKRCASASSLKYHMESVHTKEMNYSCKQCDQAFNTTKRLRVHVRFKHEGKSKPKNKICCICSKAFSTKVGLQQHMNSHTGARPSVCKVCEASFSHSGALYTHTKLLHKRQKRQKPDKTSQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -