Basic Information

Insect: Galleria mellonella
Gene Symbol: -
Assembly: GCA_958496185.1
Location: OY292298.1:6395271-6410793[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.072 4.7 8.3 0.6 2 20 7 26 6 28 0.87

2 13 2.8 1.8e+02 3.3 0.1 2 21 34 53 33 54 0.91

3 13 0.16 10 7.3 0.3 1 12 209 220 209 229 0.83

4 13 8.9e-05 0.0058 17.5 0.1 1 23 385 407 385 407 0.98

5 13 0.13 8.6 7.5 3.0 1 23 420 442 420 442 0.98

6 13 5.8 3.8e+02 2.3 0.3 1 10 467 476 467 488 0.68

7 13 0.00013 0.0082 17.0 1.9 3 23 496 516 494 516 0.96

8 13 0.0023 0.15 13.0 2.4 1 23 532 554 532 554 0.98

9 13 1.6e-06 0.0001 23.0 4.5 1 23 560 582 560 582 0.98

10 13 0.0067 0.44 11.6 5.5 1 23 588 610 588 610 0.97

11 13 2.1e-06 0.00014 22.6 0.4 1 23 616 638 616 638 0.98

12 13 0.00047 0.031 15.2 1.1 1 23 642 664 642 664 0.98

13 13 0.0016 0.1 13.5 0.9 1 23 672 695 672 696 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.072	4.7	8.3	0.6	2	20	7	26	6	28	0.87
2	13	2.8	1.8e+02	3.3	0.1	2	21	34	53	33	54	0.91
3	13	0.16	10	7.3	0.3	1	12	209	220	209	229	0.83
4	13	8.9e-05	0.0058	17.5	0.1	1	23	385	407	385	407	0.98
5	13	0.13	8.6	7.5	3.0	1	23	420	442	420	442	0.98
6	13	5.8	3.8e+02	2.3	0.3	1	10	467	476	467	488	0.68
7	13	0.00013	0.0082	17.0	1.9	3	23	496	516	494	516	0.96
8	13	0.0023	0.15	13.0	2.4	1	23	532	554	532	554	0.98
9	13	1.6e-06	0.0001	23.0	4.5	1	23	560	582	560	582	0.98
10	13	0.0067	0.44	11.6	5.5	1	23	588	610	588	610	0.97
11	13	2.1e-06	0.00014	22.6	0.4	1	23	616	638	616	638	0.98
12	13	0.00047	0.031	15.2	1.1	1	23	642	664	642	664	0.98
13	13	0.0016	0.1	13.5	0.9	1	23	672	695	672	696	0.95

Sequence Information

Coding Sequence: ATGGAAGACCTAATAATGAAATGCCCCCTTTGCTGTGATAGAACATTTACTTCAAAGATATCACTTGTTGAACATTTATCGAACATTTTATCCAACCTGATTTGTCCTGTTTGCAAAAATAAATGGTCATCACTTGCTCATCTTATTGAACATTTAAATCTCGATGATTGCCAACCAGATAATACAGTTCAGTCATTTGATATGGCTACACTGGAGgaagaaaatattgaaaatagcaCTGAAAATTGTACTTCTGAGTCAAAGTCTTTGGAAGATGaaattttaattaaacatgaaGAACTTGGACAACTCTCTGTTGAAACAGTAACCGAAGTCCCACAAGAAAATGACAGTAAAATGTATGTAGAATTATTAAGCAAGCAGCTGACTAAACCATGTCTTCAGACTCAGGAGCTAAAATTTGTTATGGAGGATGGAGAAAGCCGATATGTGATTATGGAGCAAGGTGATTCTGAACTAAACTTAGAAAGTGCTGTGGTCACTAAGCAGAATAATGATGGTACCATATCTTTGACTACAGTTAAAGTTTcagatttaaaaatagatactgGGCCAACAGTTGCTGCAGCAGAAACTGAAGTAGAGGGAACAGGTCAGGAAATATATAGTTGCAATACATGTGGTGTATCATTTTCTTCTGTTATAGAACACATACAGAACTACCACACTGATGAGGAAGTAGTTGTTGAGGAACCTTTAGAAGACGCTGATAATGAACCAAATGGAATGCCTCTAGAGTTGGACCCTCTTAATGATAATACTCCACGAAGTGAACCTATAGCTTCAAGACGAATGATCACTGATACTGGTGACATAGTGGAAGCTCCAGTATTAGTTAAAACCACAGCTTTGTTGTTATCTGAATCTCCAAGTGATTCCGCAAAAGAAAACAATAGCGAAAAACGAGGGCGACCTCCCGCAAAGCGATATGTGCAAATAGATAAATTCTGTGATAGTATTGTGAAAGATATAAACCCAAATGATGaaaaggGTGGTCCCTATCACAAAGTGACGATGAAAAATTGCAAAACAACCgatggaaaaaatattaaaatgtatcacTGTATGTCATGTAATGTTTATGTTGCAAACTTAGAAGAATTTAAGTCATATGTTTGTAAAACATTGAAGTATTCCTGCCCTCAATGTCCAGTGGCATATGACAACTCTAAATCACTTAGTGCACATATGAAAGCTCATAAATCAAAGTCAGaaatcaAAAGTTCACCTGCTACTTATGAGTGTGAAATTTGTTGTACTGTATTCTTAACAAATAAGTCGTTAAAACTTCATAAACGAATGCATGATCCAATCAAatcACGACCTATAGATCCGCCAGTGAAGTCAGCCGATGGCGAGGAGGCAGACAGTGAGCGATATCTATGCACAATATGTGACAAGATGATACCGGTGGATTATAAAACTATACACCAAAACTCCCATAAACACAATAACAAAATGAATTGTAGTATATGCAATAAGAAATTCCATTCGAACGAATATCTAGAAATGCATATGAGTGTACATAGTTTAGAtaagGTACCAGTTAATAAAACTGACCAATCACTTCCATATAGCTGTCTGTACTGTACAAGAAGGTTCGCGAGGCCACATGAAAAGGTCAAACATGAGAGGATACACACCGGTGAAAAACCGCATTCGTGTGAAATATGTGGGAAGTCATTCCGGGTGTCGTATTGCCTTACGCTACACATGCGTACACATACAGGCGCGCGGCCATACGCCTGTGTGCATTGCGGCAAGCGGTTTAAAGCGCACAGCGTGTACAATCACCACTTGCTGACCCACTCGGAGGTGCGCGCGTACAAATGTCCGTACTGTCCGAAAGCGTTCAAGACATCCGTACAACTGGCCGGACACAAGAACTCTCACACAAAACCGTTCTCTTGCCAGCATTGTAACAGGCCGTTTGCGTCCCTGTACGCAGTGCGCGTACACACGGAGACGCACCTGCGTCAGAACAACCTGAAGTTTTCGTGTCGCCTGTGCGGCGCCAGCTACGCGCGTTCCTTCGCACTCAAAGACCACGTCAAGCAGGTCCATCATCAAGAGCTCGAAGACGCCGACAATTCTGCACCTCTTAGCGAGGACTGGGTAGTAACAGAAAACACCGAGAGCGATACGACTTCTATGCCAACACTCAACAAAGATTTATCTCAGGAGataACGGTGCTCGGAATGAATACAAATGAACTGATAGTGCCCTga
Protein Sequence: MEDLIMKCPLCCDRTFTSKISLVEHLSNILSNLICPVCKNKWSSLAHLIEHLNLDDCQPDNTVQSFDMATLEEENIENSTENCTSESKSLEDEILIKHEELGQLSVETVTEVPQENDSKMYVELLSKQLTKPCLQTQELKFVMEDGESRYVIMEQGDSELNLESAVVTKQNNDGTISLTTVKVSDLKIDTGPTVAAAETEVEGTGQEIYSCNTCGVSFSSVIEHIQNYHTDEEVVVEEPLEDADNEPNGMPLELDPLNDNTPRSEPIASRRMITDTGDIVEAPVLVKTTALLLSESPSDSAKENNSEKRGRPPAKRYVQIDKFCDSIVKDINPNDEKGGPYHKVTMKNCKTTDGKNIKMYHCMSCNVYVANLEEFKSYVCKTLKYSCPQCPVAYDNSKSLSAHMKAHKSKSEIKSSPATYECEICCTVFLTNKSLKLHKRMHDPIKSRPIDPPVKSADGEEADSERYLCTICDKMIPVDYKTIHQNSHKHNNKMNCSICNKKFHSNEYLEMHMSVHSLDKVPVNKTDQSLPYSCLYCTRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACVHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHLRQNNLKFSCRLCGASYARSFALKDHVKQVHHQELEDADNSAPLSEDWVVTENTESDTTSMPTLNKDLSQEITVLGMNTNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -