Basic Information

Insect: Galleria mellonella
Gene Symbol: -
Assembly: GCA_958496185.1
Location: OY292308.1:8437664-8439373[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0023 0.15 13.0 0.4 1 23 19 42 19 42 0.98

2 16 0.048 3.2 8.9 0.2 2 23 97 119 96 119 0.95

3 16 0.0014 0.093 13.7 4.4 1 23 125 148 125 148 0.97

4 16 0.21 14 6.9 0.2 2 20 153 171 152 173 0.90

5 16 0.00072 0.047 14.6 1.0 1 23 181 204 181 204 0.98

6 16 0.0018 0.12 13.3 1.3 1 23 209 232 209 232 0.96

7 16 0.00047 0.03 15.2 0.1 2 23 245 266 244 266 0.97

8 16 0.0036 0.23 12.4 0.9 1 23 272 294 272 294 0.98

9 16 5.8 3.8e+02 2.3 0.1 2 8 300 306 299 311 0.86

10 16 1.3e-05 0.00084 20.1 0.7 1 23 330 352 330 352 0.97

11 16 0.58 38 5.5 0.3 2 23 357 378 356 378 0.91

12 16 0.00042 0.028 15.3 0.6 2 23 394 416 393 416 0.96

13 16 1.4e-05 0.0009 20.0 3.1 1 23 422 444 422 444 0.99

14 16 0.0001 0.0066 17.3 2.2 2 23 451 472 451 472 0.97

15 16 0.001 0.068 14.1 0.7 1 23 478 501 478 501 0.93

16 16 0.038 2.5 9.2 1.5 3 23 508 529 506 529 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0023	0.15	13.0	0.4	1	23	19	42	19	42	0.98
2	16	0.048	3.2	8.9	0.2	2	23	97	119	96	119	0.95
3	16	0.0014	0.093	13.7	4.4	1	23	125	148	125	148	0.97
4	16	0.21	14	6.9	0.2	2	20	153	171	152	173	0.90
5	16	0.00072	0.047	14.6	1.0	1	23	181	204	181	204	0.98
6	16	0.0018	0.12	13.3	1.3	1	23	209	232	209	232	0.96
7	16	0.00047	0.03	15.2	0.1	2	23	245	266	244	266	0.97
8	16	0.0036	0.23	12.4	0.9	1	23	272	294	272	294	0.98
9	16	5.8	3.8e+02	2.3	0.1	2	8	300	306	299	311	0.86
10	16	1.3e-05	0.00084	20.1	0.7	1	23	330	352	330	352	0.97
11	16	0.58	38	5.5	0.3	2	23	357	378	356	378	0.91
12	16	0.00042	0.028	15.3	0.6	2	23	394	416	393	416	0.96
13	16	1.4e-05	0.0009	20.0	3.1	1	23	422	444	422	444	0.99
14	16	0.0001	0.0066	17.3	2.2	2	23	451	472	451	472	0.97
15	16	0.001	0.068	14.1	0.7	1	23	478	501	478	501	0.93
16	16	0.038	2.5	9.2	1.5	3	23	508	529	506	529	0.95

Sequence Information

Coding Sequence: atgccTGAAGAAACTTTTCTGGAGCATTTAAAACTTAACCACGAAGATGACATATATGAGTGCGAAGTCTGTGATCATATACTCTACTCTCCTTTAGCACTGGAAACGCACATGAAGAGAAAACATGGCGACCCGCAATGTATAATGTGCTTGAAACATTTTAAAGAAGCCGATCTAAAAATTCATAAGTGTAAATATGGATGTTTAGATTGCAGAGAGATGCCGTGtatacattacaaatatttagtcTCATATAGAGAGCAAGTAATGAATCAAGCTACTAAAATTATGTGTTTGGATTGTGATTACGTTTGTCCGAAAAGAGAAGCATTATTGGGTCATGTCAATCGTGAGCATTTAGACCACCACCCCTTTACTTGCGCTCATTGTTCTCAGCAGTTTTATTCTAAAGTGACTTTAAGGAACCATTTAAATCGATTCCACAGGGAAAACTTGATGTGCCAATTCTGCGATTTGGACTTTAAAAGTAAAACGACATTTGACGAACACGTTGAAATCTGTAAATGGATTAAACGACAATTTAAATGTGATGTATGCACATCCTCGTTTGATACTGAAGAAGAGTTGTCGAAccataaaaatactaaacacaATGACGGCGTATTCCCTTGCAATTTATGTAACAAACAATTTTACACAATATTGAAATTGAAAGAACACATGTTTAGAATACACAGTGGTATACAACTGAAAAGAAGGCGAACCAACCTAGAATGTCCAATGTGTGAAACTAAATTCGATGCCAAGAAAGAACTGATGCAGCATATTGCGACCCATGGTCCCGACGCAAGATTTCCATGTAAAATTTGCAATGTTGATTTCGACGACATAAAGAAACTTCATGCACACAGCCGCATGCACTGCGATGACGTCATCAAATGcaatgattgtaacaaactcataACAACTGCTTTCTTTCCTCAACATATGATTTACTGTAATGCCAATAAGAGCACTGTCAATGCATATGAATGCGAGACTTGTGGTAAAACATTCCAAACAGAGTCAATGCTGAAATTGCACAAGCAAGCTCATTTGGACCCTGTAGAATGTCCTATCTGCAGAAAATTAATAAAGCCAATATATTTGAAGAGACATTTGAAGTACACGCATACACAGAAGAAATTGGTGAAGCCGAAAAAGAATTTGAAAGTGGTGAAATGCGACTGGTGTGGGCATATGGTGACAAGGAAAGGGGAGTTAGAGTCTCACGTCAATAgattccatttaaaaataaaaccttacgAGTGTAATATTTGTAAGAAAACATTTTGTGGCAAGGAACGTTTGAAGGAGCACATCCAGACTCATTCTACAGAACACACACGGTACTGTACTATTTGTGGCAAGAAATACGCGAACAGGGTGTGCTTGAAAATGCACCTACGTTTACACTCGGGTGTTACGCCGTACGAATGTGATATATGCGGGGAGAAATTTAGATCTTCGAGTATAATGAAcacacataaaataaagaaacatacTGAGAAAACTATATGTTGCCCGCTCTGCGATACAATGTTCTATTTGGCTAGGGAGATGAGGAATCATTTTAAGAAGGTACACTGGAAAAATAAGGATAAGAAATTCGACCCGAGAGACGTGAAAGAGCTGGGCAAGGAGTACTATTACCTATTTGAGGATAGAAGGCAACCGAAAGTGGACGAGAATGAGTTGGTATTGTATTAA
Protein Sequence: MPEETFLEHLKLNHEDDIYECEVCDHILYSPLALETHMKRKHGDPQCIMCLKHFKEADLKIHKCKYGCLDCREMPCIHYKYLVSYREQVMNQATKIMCLDCDYVCPKREALLGHVNREHLDHHPFTCAHCSQQFYSKVTLRNHLNRFHRENLMCQFCDLDFKSKTTFDEHVEICKWIKRQFKCDVCTSSFDTEEELSNHKNTKHNDGVFPCNLCNKQFYTILKLKEHMFRIHSGIQLKRRRTNLECPMCETKFDAKKELMQHIATHGPDARFPCKICNVDFDDIKKLHAHSRMHCDDVIKCNDCNKLITTAFFPQHMIYCNANKSTVNAYECETCGKTFQTESMLKLHKQAHLDPVECPICRKLIKPIYLKRHLKYTHTQKKLVKPKKNLKVVKCDWCGHMVTRKGELESHVNRFHLKIKPYECNICKKTFCGKERLKEHIQTHSTEHTRYCTICGKKYANRVCLKMHLRLHSGVTPYECDICGEKFRSSSIMNTHKIKKHTEKTICCPLCDTMFYLAREMRNHFKKVHWKNKDKKFDPRDVKELGKEYYYLFEDRRQPKVDENELVLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -