Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_958496185.1
Location
OY292311.1:5695936-5709795[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.9e-05 0.0013 19.5 2.1 2 23 33 54 33 54 0.98
2 14 8.7e-05 0.0057 17.5 4.4 1 23 60 83 60 83 0.98
3 14 4.1e-06 0.00027 21.7 3.9 2 23 90 111 89 111 0.97
4 14 3.4e-05 0.0023 18.8 0.7 1 23 117 139 117 139 0.98
5 14 0.011 0.69 10.9 6.6 1 23 145 167 145 167 0.98
6 14 0.0024 0.16 12.9 1.3 1 23 174 197 174 197 0.92
7 14 3e-06 0.00019 22.1 0.2 1 23 205 228 205 228 0.96
8 14 0.00017 0.011 16.6 1.0 2 23 235 256 234 256 0.95
9 14 0.00067 0.044 14.7 2.0 1 23 262 286 262 286 0.97
10 14 0.00027 0.018 15.9 0.3 2 23 293 314 292 314 0.96
11 14 0.18 12 7.0 2.3 1 23 320 342 320 342 0.97
12 14 0.89 58 4.9 4.7 1 23 656 678 656 678 0.93
13 14 3.1 2e+02 3.2 1.0 2 23 689 709 688 709 0.78
14 14 0.0022 0.15 13.1 2.3 1 23 838 860 838 860 0.98

Sequence Information

Coding Sequence
ATGGACGCCAAGATGAACGCCACGCTACCATCGGAGGAAATATTAAGGGAGAATTTAAAAAACACTAAAAAGAGAAAAGCAACGTACTCGGAACCAAAATGCAAGATTTGTAAAAAGATATTCAAAGAAAGGGGTTCGCTGACAAAACACATGCAACTGCACAACAAGAGCGACCCGTACACGTGCGACCTGTGCAAATACACGTGCAAGACGCGGCAGTACCTCGCGAGGCACATGCGGCGGGCGCACGGGGACCCCAGCGCGTGCAAGTGTGATGTGTGCGGCAAGATGTTCCACTTCCAGTCCAATCTGGCGTCGCATATGAGGGTCCACACTGGTGAGAAGCCGTACAAATGTGGTGAATGTGGCAAGACGTTTAGCGCCAAATACACACTGGACACTCACAAGTTGATACACACAAACGAGAAGCCGTACAAATGTTCGTTCTGCGAGTACGCGTGCCGGGACACGTCCACACTACGCCGCCACCACGAGCGGCACATGGGAGTGCTGAAGGTGTACACGTGCAGCTACTGTTCCAAGCAATACAACACGAAAGCCCGGCTGAAAGAGCACGTGGCTGAGAAACACTTCAACGTGGACCTCAGGAAGTTCCCTTGCAACGTCTGCGGGAAGATGTTCAAGCTGAGGCCGAACCTGAGGACGCATATACGTGCCGTACACGAGAAGTCGACGGTGTGTAAATGTGACATTTGTGGTAAGCAGTTGACGAATAAGAACAATATGGCGGCGCACATGGTCAGCCACAGCGAGGACAGGCCGTACAAGTGCACCTTCAACGGCTGCCGGAAGCAGTTCAAGGACAAATGGGCGTTGAAAAGGCACTCCGTGACCCACACGCCGGAGAAGCAGCTGCCGTGCGCGGTCTGCGGGAAGCTGTTCACGAGGCGGACGCGGCTGAACGCGCACGTACGGCAGCACGCGACCAAGAAGAGCTACGTGTGCGACTACTGCGGCATTTGTATTTTCAGCAAAATGGTCCTGGGCAAGCATATACACAAACATATGTACGGCCCGCCCGGCCAGCGCTGCGCCCGCACACACaagcAAAAATATCCAAAGCGGCGCTTGAGAAGGCGAGGAGGAATCGCGCAGAGTCAGGACTCaaAGTCGCATACGGCTCCATTGGTGCACATCAAGGAGGAGCCTGAAGAGCAGGACGAGCTGGTGCCGGACGCGGAGATAGACCTGCTGGAGATAGAGAAACACGAGGTGTTCGCTGAATTAAACCTCAACAATGAGCTGGAACCAGATGACAGTATGAACTACTCAAACGCCGTACTCTCCGAGGATATAGCACGGAGCATGACGGAGAAGAAGCAGGCGGAGGATGCCGAACGCGTCATAGACACGCTGTTCATAGACAACTGCGCTCACAAACAACTCAAAGGTAAAATAAAAGCTGACAGAATTGAAATTGACGAGAATTGTGTAAGAAGGGTACTTAATGTGAAGAAACCAGAAGACGTTGATGAAAAGAGGAATGATTTTAACAGAGGAACCAAAGAGAGAACAGGTACAAGAGAGAAATCACAagtgtataaaaatacacatgACTCCGATAATGATGACACCGTCCATAACGACGACACGAGTGAAAGAGACGACCATACCATAGAAAGAGACAACACTCCTACTGAAAGTGGCTACGGTACAACAGAAAGGGACAGCAATACTAGTGGAAAAGACCTCAATTTCAAAGAAACAGatgaaaatacaataaatagagACGACAATATTGCAGAAAGAGTCAACAATATCATTGAAGACAATAATAGGCTAGAAATTGAGGGCAGTGCCAGAGAAAGAGAAGAAGATAACGCAGACAGAGACGGCAATACTACAGATAGCGATACAGAAGTAGATGTGTCTACTAGTATGTGTGAGAAGGACGACAATATGGAGTCGACCAGGCGAGGGAACGCAAAGTTGAAGTTGAACACGCACCAGTGCTATATCTGTTTCAAGttGTTCGCAACGAAGCAGATGTTACTGGACCATTGCAAAGTACATTTCGACGTGTGCACTGAAACGACGCTCAAGAAATGTCCCCTGTGCGACTTTGTCACGAAATTCGACATCAGGCGGCACCTGAAGAAGATACACGGCGTCACCATAGACAAGCTACCGTTCGCCCACATCAACGACAAGGTGGTCAACGACAATAAATCTAGATACTATTACACACTGAACAACGCGGTTGTCAAAGAAATGGAGATAATTCCGAGCGTGAAAATTCTCAATAAGAAAGCCAGCGAAGAGATCGATAAGAGAAATAGAAAAAGCAAAGACAAATCTGTGACGAAAACGAAATTAGTGAAGAAGGGAAACGAGTGGGTCGTACAGAAAGAGAAGATTGATGTAAACGAATTCATGCTGCCCAATTTCAGCGAAGAAGAGATTAAAAGACTTAACATAGAAGGTGACAATCACTGTGAGAGATTACGAACCATGTACCATTTCGCTAAAAAGAACGATATAAAGATGCTGTTCCCGTGTGATCGGTGCGAGAAAATATGCAGGACACTGAGCGCGCTGAAGTTGCACAACAGGAAACACGAGAAGGACCCCAAGCCGTTCAAGCGTAAAGTGTGGAAACACAGGCTGTTAGAGGGCGGTGCGAAGTCTGCAAAAGCCAATTTGAGCGAGACACCGGTCGGAACCGAGAAGCCGGTTAGTAACAACCGGTTCGCAGACCCGAAACCGGTGAAAAACAAACACAAATGCGACCCGAAACTCATAGATTTCTACAAGAATAACATCAAAGGGGGAGACATTGAGTTCTGGCAGTTTTTGAAGATTTACAACAAAATGTGTAGGGAGAATATTGAAGATTTTGATGAGTTGGAAACGAGAACTGACTACGGGTTGCAACCGACGGGAATCGAGCCAGGAATCGATGAGTGTACTAAGGAAAGAACTGCGGAGAATGTCGATAGTAATATTAAGCGAAAAACTATTGCAGCAGAAAATAAAATGATCAGAAGAGAGAAGAGAGTGATTAGGAGAATTGCAATGAGCAAGCATGAATATCTCAGGAGGTTGGCTATTAAAAAACAACTCAGGGAGAAAAATAGGCTATGGCAGAAATGA
Protein Sequence
MDAKMNATLPSEEILRENLKNTKKRKATYSEPKCKICKKIFKERGSLTKHMQLHNKSDPYTCDLCKYTCKTRQYLARHMRRAHGDPSACKCDVCGKMFHFQSNLASHMRVHTGEKPYKCGECGKTFSAKYTLDTHKLIHTNEKPYKCSFCEYACRDTSTLRRHHERHMGVLKVYTCSYCSKQYNTKARLKEHVAEKHFNVDLRKFPCNVCGKMFKLRPNLRTHIRAVHEKSTVCKCDICGKQLTNKNNMAAHMVSHSEDRPYKCTFNGCRKQFKDKWALKRHSVTHTPEKQLPCAVCGKLFTRRTRLNAHVRQHATKKSYVCDYCGICIFSKMVLGKHIHKHMYGPPGQRCARTHKQKYPKRRLRRRGGIAQSQDSKSHTAPLVHIKEEPEEQDELVPDAEIDLLEIEKHEVFAELNLNNELEPDDSMNYSNAVLSEDIARSMTEKKQAEDAERVIDTLFIDNCAHKQLKGKIKADRIEIDENCVRRVLNVKKPEDVDEKRNDFNRGTKERTGTREKSQVYKNTHDSDNDDTVHNDDTSERDDHTIERDNTPTESGYGTTERDSNTSGKDLNFKETDENTINRDDNIAERVNNIIEDNNRLEIEGSAREREEDNADRDGNTTDSDTEVDVSTSMCEKDDNMESTRRGNAKLKLNTHQCYICFKLFATKQMLLDHCKVHFDVCTETTLKKCPLCDFVTKFDIRRHLKKIHGVTIDKLPFAHINDKVVNDNKSRYYYTLNNAVVKEMEIIPSVKILNKKASEEIDKRNRKSKDKSVTKTKLVKKGNEWVVQKEKIDVNEFMLPNFSEEEIKRLNIEGDNHCERLRTMYHFAKKNDIKMLFPCDRCEKICRTLSALKLHNRKHEKDPKPFKRKVWKHRLLEGGAKSAKANLSETPVGTEKPVSNNRFADPKPVKNKHKCDPKLIDFYKNNIKGGDIEFWQFLKIYNKMCRENIEDFDELETRTDYGLQPTGIEPGIDECTKERTAENVDSNIKRKTIAAENKMIRREKRVIRRIAMSKHEYLRRLAIKKQLREKNRLWQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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