Basic Information

Insect: Galleria mellonella
Gene Symbol: -
Assembly: GCA_958496185.1
Location: OY292284.1:17128128-17144334[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.7 4.4e+02 2.1 0.1 3 23 267 287 265 287 0.82

2 12 0.00021 0.013 16.3 2.6 2 23 450 472 449 472 0.94

3 12 0.0071 0.46 11.5 0.1 1 23 478 500 478 500 0.94

4 12 0.034 2.2 9.3 0.2 1 23 509 532 509 532 0.88

5 12 2.7e-07 1.8e-05 25.4 3.5 1 23 537 559 537 559 0.98

6 12 5.8e-06 0.00038 21.2 1.2 1 23 565 587 565 587 0.97

7 12 0.00011 0.007 17.2 3.8 1 23 593 615 593 615 0.97

8 12 4.3e-07 2.8e-05 24.8 0.2 1 23 621 643 621 643 0.98

9 12 0.0081 0.53 11.3 2.0 1 23 649 671 649 671 0.97

10 12 0.00015 0.0098 16.8 0.6 3 22 703 722 701 722 0.94

11 12 0.00014 0.0092 16.8 0.4 1 23 747 769 747 769 0.98

12 12 6.8e-06 0.00045 21.0 3.6 1 23 775 798 775 798 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.7	4.4e+02	2.1	0.1	3	23	267	287	265	287	0.82
2	12	0.00021	0.013	16.3	2.6	2	23	450	472	449	472	0.94
3	12	0.0071	0.46	11.5	0.1	1	23	478	500	478	500	0.94
4	12	0.034	2.2	9.3	0.2	1	23	509	532	509	532	0.88
5	12	2.7e-07	1.8e-05	25.4	3.5	1	23	537	559	537	559	0.98
6	12	5.8e-06	0.00038	21.2	1.2	1	23	565	587	565	587	0.97
7	12	0.00011	0.007	17.2	3.8	1	23	593	615	593	615	0.97
8	12	4.3e-07	2.8e-05	24.8	0.2	1	23	621	643	621	643	0.98
9	12	0.0081	0.53	11.3	2.0	1	23	649	671	649	671	0.97
10	12	0.00015	0.0098	16.8	0.6	3	22	703	722	701	722	0.94
11	12	0.00014	0.0092	16.8	0.4	1	23	747	769	747	769	0.98
12	12	6.8e-06	0.00045	21.0	3.6	1	23	775	798	775	798	0.96

Sequence Information

Coding Sequence: ATGGAAGTGGTTCTTTATAATTCTACCGTTTGTAGATTATGTGGAGAAGAAAATGATAATGgaacattattatattctagTGATGTAAATAATCAAACATTATGTGaagttattaatacatatttaccaATTAAgATATCAGATGATGGCCAATTACCTAGAACCATATGTCCAGGATGTACAATTCAGTTGGAAGCCACAGTGGAATTCTTAAATCTTATTGCGAAAGGCCAGAAAATAATACGAGAGCTACATCAGAGAGAAAAAGATTATAAGAAATCATTATGCAATGGTAACACCAAAGCACCTGAGATTATTACTGAAAACATTGTGTACGaaaTAAACACAAGTAATGGAATGTACCAAGTGGAACATCCAATTGCTTTGCAAATTGCTGGCTTGGAGAAACCCAAACGTAAACGTGGGCGGCCACCCAAAAAGCCCAAAAGCACTGAAGAATTGCCAGAAGAAGAACCCGTGGTATTGCAAAATCTGGATTCAGCTAATAATTCAAAAGAAGAACCAACACCTGGAAAGCGACGACGGAAAACGCCAACTAGATTCAAAGAAGCTgtacagGGTAAAGAGTTAGAGAGAATATTTATAGAAGAAGGGGTAATTGATGGAGAAGAAAGTGAGAATGACATCAAGCCAGACATAGATCCGGAGCAAAAAATTCCAGAATCAAAGGAACCAGAGATTATTGGTCATATGGAGGACTCTGGAGAACTAGTTGTGGTTGTCAAGGGCAAAGGACGCGGTCGGCCCAAAGGGCGCGTGCAGGCGCGGCAGTGGGCGTGCGCGCAGTGCGGCGCGGTGTTCTCGTGCGCGGGCCGCTACATGGCGCACGTGGCGCAGCACGGGCCCGCGCGCTGCGGCTGCGGCCTGCGCTGCGACTCGCGCCTGCACCTGCACCACCACCAGCGCGCCACCGGACACTCCGCCGCCGACACCACTACCGCCGCCGACACCGCCGCCGACACCGCCGCCGACACCGCCGacaccgccgccgccaccgaCCACACCGACCACACGCCCGCCGCTGCGGGTGAGaaTCTTCAAAATGAATCCAAAGGAGAAACAACTCCGCCTCAACAGACCACAGATTCACCTGACCTGCCATCAATTGACAATGTCATTGACAATGTAATGGCAAGCAAAAGTTTACCCGACCTGAACCCACTCTTACCAGAAAATACTACAAATACATCCGAAGCAGTTGAAGTCGTTCCAGAGGACACTAAAAAAGACATTGAAGCCAATGAAAATTCAATTATTCTTAAAGAAATACCTCTCGACACTGAGGGCCCTGCAGAAGTTATTGTGCCTGATGTAAAGCCAAGGCTCAAGTGCAACCACTGTGACAAGACGTTTAGTACCAAACAGAGCAAGTCTGTACATATaaagGCGGCGCACCAGGGCGAGCGGCCGCACGTGTGCGGCGAGTGCGGCGCCCGGTTCGCGTACCCGCGCTCGCTGGCGCTGCACGCCGTCTCGCACCGCCGCCCGCGCGCCGCGCGCGGCTTCGCCTGCGACCTCTGCGGCAAGGTACTGAACCACCCATCGTCGGTGGTATACCACAAGGAGGCGGAGCACGCGGGCCAGCGGTACGTGTGTAACAAGTGCGGCAAGTCGTTCAAGCACAAGCAGCTACTGCAGCGGCACCAGCTCGTACACTCGCAGCTGCGACCCTTCACCTGCAAGACGTGTAATGCATCGTTCAAGACGAAAGCGAATCTGATCAATCATCAACTACTTCACTCCGGGATCAAGAAATTCGCTTGTGAAATTTGCAAGCACCGTTTCGCGCACAAAACTAGTCTCACGCTGCACATGAGGTGGCATACAGGCCAGAAGCCGTTCTCGTGCGGCGTGTGCGGCAAGAGCTTCAGCCAGAAGGGCAACCTGTCGGAGCACGCGCGCATCCACACGGGCGAGAAGCCGTACGCCTGCGCGCTGTGCCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACGCGCGCCGCCACGCGCAGCAGCCGCAGCACGCGCAGCACCCGCAGCACGCGCAGCACCCGCAGCACGCGCAGCAGCCGCAGCGGGACGACCGCGTCACGCTCGCCTGCACGCACTGCCCCAAGCGATTTGCGTCGCACACGGCACTGATAGCGCACCAGCGGCGCGTGGCTgccgcggcggcgggcgcgggagCGGAGGCGGAGGCGGGCGCGGACGCGGGCGGGCAGCGGCAGCGGCACACGTGCGGCGAGTGCGGACGGTCGTTCGGTGAACGCTGGGCGCTGGTAAAGCACGCGCGCCGCCATACCGGCGAGCGACCCTTCCGCTGTCCGCACTGCCCGCGAGCCTTCGCGGACTGCTCCAACCTCAACAAGCACAAGAAGCAAGTGCACAAACAAATAAGTCTGCTGGTAAACGATAATAACCAACCGGAAGCGGTAGAGGCGGGGGCGGTGATGATGATGGGTGGCGAGGTGGAGGAGGCGGCGGCGGGAGTGGTGCAGGAGGAGGGCGGCCAGGGGGAGGGGGAGTTACACGAGCGCGTCATATACGTGGCGTACGACGTGGACGAGCCGCATTCACCCGCATACCACATATTGGATCCGGAGCAGGCGGCGACCCTGAACAACGGCAAGATGTTGTCAACCTGCGAGCTGTACCCGGGCCCGTCGCTGCTGGTGCAGCACACAGAGCTGGAGGCGGAACCCGAGCTGCACGAGGAGGCTAGCCTCCAGCAGTACGATCCCAAGTTGGACGAGCTCCCATTGAAGGATGAACATATTACAGTAACAGATGAGCAAGGCAATCCGCTCCACTTCACGATGCAGGACGGCACGCAGCTCGCCATCACCTCCGTGGACGGGAAATCTTTGCAGGTTGTGACACAAGATGGCCAGACTATCCCCGTCGAGATCAACGGATACGACGAGGAAGAGGAAGAGgAGGCAGTAGAAGCACCCGAGAGGATTGTTCACCAGTTGAGAATCGACAACAGCGACGGTACCCCTGTCACACATTACTTTGCCCTCGTCTAA
Protein Sequence: MEVVLYNSTVCRLCGEENDNGTLLYSSDVNNQTLCEVINTYLPIKISDDGQLPRTICPGCTIQLEATVEFLNLIAKGQKIIRELHQREKDYKKSLCNGNTKAPEIITENIVYEINTSNGMYQVEHPIALQIAGLEKPKRKRGRPPKKPKSTEELPEEEPVVLQNLDSANNSKEEPTPGKRRRKTPTRFKEAVQGKELERIFIEEGVIDGEESENDIKPDIDPEQKIPESKEPEIIGHMEDSGELVVVVKGKGRGRPKGRVQARQWACAQCGAVFSCAGRYMAHVAQHGPARCGCGLRCDSRLHLHHHQRATGHSAADTTTAADTAADTAADTADTAAATDHTDHTPAAAGENLQNESKGETTPPQQTTDSPDLPSIDNVIDNVMASKSLPDLNPLLPENTTNTSEAVEVVPEDTKKDIEANENSIILKEIPLDTEGPAEVIVPDVKPRLKCNHCDKTFSTKQSKSVHIKAAHQGERPHVCGECGARFAYPRSLALHAVSHRRPRAARGFACDLCGKVLNHPSSVVYHKEAEHAGQRYVCNKCGKSFKHKQLLQRHQLVHSQLRPFTCKTCNASFKTKANLINHQLLHSGIKKFACEICKHRFAHKTSLTLHMRWHTGQKPFSCGVCGKSFSQKGNLSEHARIHTGEKPYACALCPRRFTTSSQHRLHARRHAQQPQHAQHPQHAQHPQHAQQPQRDDRVTLACTHCPKRFASHTALIAHQRRVAAAAAGAGAEAEAGADAGGQRQRHTCGECGRSFGERWALVKHARRHTGERPFRCPHCPRAFADCSNLNKHKKQVHKQISLLVNDNNQPEAVEAGAVMMMGGEVEEAAAGVVQEEGGQGEGELHERVIYVAYDVDEPHSPAYHILDPEQAATLNNGKMLSTCELYPGPSLLVQHTELEAEPELHEEASLQQYDPKLDELPLKDEHITVTDEQGNPLHFTMQDGTQLAITSVDGKSLQVVTQDGQTIPVEINGYDEEEEEEAVEAPERIVHQLRIDNSDGTPVTHYFALV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -