Gmel020693.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292308.1:9353500-9384133[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0071 0.46 11.5 0.5 1 20 504 523 504 525 0.94 2 25 0.0073 0.48 11.4 0.5 1 20 527 546 527 552 0.93 3 25 0.0073 0.48 11.4 0.5 1 20 578 597 578 603 0.93 4 25 0.0073 0.48 11.4 0.5 1 20 629 648 629 654 0.93 5 25 0.0073 0.48 11.4 0.5 1 20 680 699 680 705 0.93 6 25 0.0073 0.48 11.4 0.5 1 20 833 852 833 858 0.93 7 25 0.0073 0.48 11.4 0.5 1 20 884 903 884 909 0.93 8 25 0.0071 0.46 11.5 0.5 1 20 935 954 935 956 0.94 9 25 0.0073 0.48 11.4 0.5 1 20 958 977 958 983 0.93 10 25 0.0073 0.48 11.4 0.5 1 20 1009 1028 1009 1034 0.93 11 25 0.0073 0.48 11.4 0.5 1 20 1060 1079 1060 1085 0.93 12 25 0.0071 0.46 11.5 0.5 1 20 1111 1130 1111 1132 0.94 13 25 0.0073 0.48 11.4 0.5 1 20 1134 1153 1134 1159 0.93 14 25 0.77 50 5.1 0.3 1 17 1185 1201 1185 1202 0.91 15 25 0.0044 0.29 12.1 4.4 1 23 1230 1252 1230 1252 0.98 16 25 4.4e-05 0.0029 18.4 2.1 1 23 1259 1281 1259 1281 0.99 17 25 6.4e-06 0.00042 21.1 0.2 1 23 1287 1309 1287 1309 0.95 18 25 0.00011 0.0074 17.1 0.1 1 23 1315 1337 1315 1337 0.97 19 25 3.2e-05 0.0021 18.9 0.4 1 23 1343 1366 1343 1366 0.95 20 25 0.18 12 7.0 0.6 1 14 1372 1385 1372 1386 0.88 21 25 0.18 12 7.0 0.6 1 14 1514 1527 1514 1528 0.88 22 25 0.18 12 7.0 0.6 1 14 1652 1665 1652 1666 0.88 23 25 0.0029 0.19 12.7 0.6 2 23 1810 1831 1809 1831 0.97 24 25 0.0006 0.039 14.8 0.9 3 23 1839 1859 1837 1859 0.96 25 25 0.0038 0.25 12.3 0.3 1 23 1865 1889 1865 1889 0.92
Sequence Information
- Coding Sequence
- ATGAATCAAAACTGTTTTATTTGTGATATTGCAACTCCAACGTCAAAAGGTTCTATAAACATATTTGACagtaatATTGGATTGCAATCAGGCAAGAAATTGCCCGACATATTGAAAGAAATCATTGATAAACCTATCAAGAGCGACATTTTGTTTTCAAATGTCCTCTGCAAAAATTGTTTCAAGTTTTGCACTGAGTATGACTCCATTCAAGTCAGATTACAAGTAATAAGGACAAATTTACTAAAGGATTTCAAGACTACCCTGCCCAAACATAACCTCAACTATGACACGTTCGGGGCCACCGCTCAGAGCACGCCAATCAAACCCACTGAGATCAAAGTGGAGGACAGGAGGCTGGTGGTGCCAGCGTCGAAGCTGCAGCCGCTGCCAGCGGACTTCGTGTTCGACATCAACAAAATGGTGGCTATGAACAAGAGTTTAGTGCGGAAGGTTCCAACATCGGAGTCCATGATAAACCTAAAGGTCACCGTCGGCTCGTCCGTCCTCACGCAGTCCGTGAAAACCGTAATGACACCTGTGTCCAAGGAGTTATCGCCGGCGAAATCGACGCAAGATGGCGCCGCACCGACGAACGTGGTTGTGACAATGTTGCCAACATTGACCCAACACACAGACAAAGTGACCACCACAAAGAACCCGGTGCTGAGTTTTAACGTCAACTCGCTACAAAAGGAGCTCATGTCATCGACCGTGTTGGCGAAAATCAATCAGAACGACAAAGGAACAAATGATTATGCTATAAATGAAAACAATGATGATCAGTCCATGGAAATTGATGAagACTGTTCCCTGGTCGTGCCGGTCACTACGAACGGTAGTGGGAAATTGGTGTTTGAAATTGACTCTTTGAAGAACAGCAAAGAGAAGCCTAAATCGAACTTCTTCGACGTTGGCCTCCTGCTGTCGGACGGCAACGAGGGTCAGGAGCGCGACGCGGACAAGTACGTCCTCGACAAGTTGCATGTGCTCAAGAGGGACGAGGACGAGGACGCGGATGACGGCGACGATGAACCGGAGACGTTAGTGATGGAGGACGAGGACGGCACGACCATCATCCGCATGGCGGCCGGCCAGCGGGTGCTGTACGACGGCACCAAGTTCGTGGTCGCCGACGATGACACCCGCGATGACAACATAGACAACGGCGACAGCCAGGACTCTAACGAGGAGTCGCAGATAGAGCTGCAGGTGTCGGGCGACGAGGAGACCGCGAATGCCATCATAGCCGCCGCCCAGGAACAAGGTGGTGCATTCATCAAAGTGGAGTCAGGCGAGATGTATCGAGTGAAATCTGTCCAGAGCAAGTCCGACGACACCAACGATGACGATGACGAGATGAATTTGATACAATCAATGGTGCAAGAAGAGGAAAATGGCCATTTCAAATGTTTGTTGTGCGCCAACAACAAGGACAGTGTGGAGCCGGTGGTGCTGCGTGCGGAACCGATGATGCAGCACCTGCGCGCGCAGCACGCCGCGCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCGCGCACCTAGGTACCGCCACACCACACGCCACCACGCCACCACGCCACCACGCCACCACGCCACCACACCGCCACCGACACACACCCACTCTAGCTCGCCTCTACATCTGCCGCGTGTGCGGCCGCCGGCTGCGGCGCCGCAACCACTACACCAGTGTACGTCTTGCCGCAGCGGAGcacgcggcgggcggcgcgcgggTGGCGGCCGCGCGGAGGCCGGCCGGCGGCGAGCGGCCGCACCGCTGCGCGCTCTGCGGCAAGACCTTCGCCTCCAAGTACACGCACCAGGCACACCTCAAGACGCACCAGGAACGGCCGCGGCCGTTTAAGTGCGACCAATGCGGGAAGACGTTCCTCACGCAGCAGAATCTCAACCAACACGAGAAGACGCATCTCGGCATCAAAGATTTTATATGCAACATCTGTGGCAAGGCGTTCGCGAGCCAGCACAACCTGGAGGTGCACGGCGTGACGCACAGCGGGCGGCGGCCCTTCGCCTGCGCGCGCTGCGGCAAGGCCTTCGCGCGCCGCCCCGAGCTGCGGGACCACGCGCGCGTCCACACAGGCGAGCGGCCGTTTGCGTGCGAAATATGCGGCGCGGCGTTCGCGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTACGTGTACGTGTACGTGTACGTGTGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTACGTGTACGTGTACGTGTACGTGTGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTACGTGTACGTGTGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTACGTGTACGTGTACGTGTACGTGTGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGCCGACAAGCGCCACGCCTGCCACCTCTGCCCCAAGCGCTTCAAGCGCCGCAGGTCAGCCTCGCCACCGCTTTATATAGCTCTCTACGAGGTGTACGTGTGCGgcgtgttatgtccatggtactgctcatGTGTAGTAGTGGTGTGGTGACTGGTCGGTTGGTTGGACGCAGGCTGCTGGAGTACCACGTGAAGGCGGCGCACACGGGCGAGCGGCCGCTGCGCTGCGCCGTGTGCCGCGCCAGCTTCGTGTACCCCGAGCACTACAAGAAGCACGCGCGCATCCACAGCGGCGAGAAGCCCTACGGCTGCGAGGTGTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGGTTCGTGCACAGCGACAAGAAGCCGTACGAGTGCTTCACGTGCGGCGCCGGCTACATGCGCAAGCGCCAGCTGCTCGCGCACATGCAGTCCACGgGTCATGTTGCCGAGTCTATAGTAGTCAATCAGCCGAGGGTCATAAAGACTTTAGAAAATACCACCATGGAGGTTGTGAACGTTTCCACCCTGGAGACGGACGACAAATATGATAACAATatattaTATGAAACGAAAGAAACTGAATTGGATGTGAACACCATAGGGACTGTGGATATATCGGAGGACGGCGGCACAACCAACTTGTTCATAACGAGCGATAAGAAAATCATACTGCAAGATGaggatataaaatcaataaaagtgGACGGAGCGACCATAGAGGCCGATGTGGAGGGCCAGCCCGAgATGATCGTGTCGGACGAGCACGGCAGCGTGATGCGCTTAATACAGATACAGTTGCCGGACGGCAAGACCGGCTGGGTGGCCATCAACAAACCGTTGGACGGCTCCCTCGCGTAG
- Protein Sequence
- MNQNCFICDIATPTSKGSINIFDSNIGLQSGKKLPDILKEIIDKPIKSDILFSNVLCKNCFKFCTEYDSIQVRLQVIRTNLLKDFKTTLPKHNLNYDTFGATAQSTPIKPTEIKVEDRRLVVPASKLQPLPADFVFDINKMVAMNKSLVRKVPTSESMINLKVTVGSSVLTQSVKTVMTPVSKELSPAKSTQDGAAPTNVVVTMLPTLTQHTDKVTTTKNPVLSFNVNSLQKELMSSTVLAKINQNDKGTNDYAINENNDDQSMEIDEDCSLVVPVTTNGSGKLVFEIDSLKNSKEKPKSNFFDVGLLLSDGNEGQERDADKYVLDKLHVLKRDEDEDADDGDDEPETLVMEDEDGTTIIRMAAGQRVLYDGTKFVVADDDTRDDNIDNGDSQDSNEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVQSKSDDTNDDDDEMNLIQSMVQEEENGHFKCLLCANNKDSVEPVVLRAEPMMQHLRAQHAARLYICRVCGRRLRRRNHYTAHLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPPTHTHSSSPLHLPRVRPPAAAPQPLHRAPRYRHTTRHHATTPPRHHATTPPPTHTHSSSPLHLPRVRPPAAAPQPLHRAPRYRHTTRHHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTAHLARLYICRVCGRRLRRRNHYTAHLGTATPHATTPPRHHATTPPHRHRHTPTLARLYICRVCGRRLRRRNHYTSVRLAAAEHAAGGARVAAARRPAGGERPHRCALCGKTFASKYTHQAHLKTHQERPRPFKCDQCGKTFLTQQNLNQHEKTHLGIKDFICNICGKAFASQHNLEVHGVTHSGRRPFACARCGKAFARRPELRDHARVHTGERPFACEICGAAFAQRSNLHSHRRATHLADKRHACHLCPKRFKRRRSASPPLYIALYEVYVYVYVYVYVCSAPTCTRTAAPRTSPTSATPATSAPSASSAAALQPALAPPRHAPRRQAPRLPPLPQALQAPQVSLATALYSSLRGVRVRVRVRVRVQRSNLHSHRRATHLADKRHACHLCPKRFKRRRSASPPLYIALYEVYVYVYVCSAPTCTRTAAPRTSPTSATPATSAPSASSAAALQPALAPPRHAPRRQAPRLPPLPQALQAPQVSLATALYSSLRGVRVRVRVRVRVQRSNLHSHRRATHLADKRHACHLCPKRFKRRRSASPPLYIALYEVYVYVYVYVYVYVCSAPTCTRTAAPRTSPTSATPATSAPSASSAAALQPALAPPRHAPRRQAPRLPPLPQALQAPQVSLATALYSSLRGVRVRRVMSMVLLMCSSGVVTGRLVGRRLLEYHVKAAHTGERPLRCAVCRASFVYPEHYKKHARIHSGEKPYGCEVCGKSFNSRDNRNTHRFVHSDKKPYECFTCGAGYMRKRQLLAHMQSTGHVAESIVVNQPRVIKTLENTTMEVVNVSTLETDDKYDNNILYETKETELDVNTIGTVDISEDGGTTNLFITSDKKIILQDEDIKSIKVDGATIEADVEGQPEMIVSDEHGSVMRLIQIQLPDGKTGWVAINKPLDGSLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -