Gmel004596.2
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292286.1:6036199-6045830[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0035 0.23 12.4 1.2 2 23 649 671 648 671 0.95 2 23 0.39 26 6.0 0.3 1 22 1044 1065 1044 1065 0.95 3 23 7.7 5e+02 1.9 0.3 1 22 1107 1128 1107 1130 0.82 4 23 0.0036 0.23 12.4 0.6 3 21 1141 1159 1139 1160 0.94 5 23 5.8 3.8e+02 2.3 0.1 3 23 1169 1190 1167 1190 0.87 6 23 0.0069 0.45 11.5 0.1 3 23 1211 1232 1209 1232 0.96 7 23 0.0021 0.14 13.1 2.1 1 23 1238 1261 1238 1261 0.95 8 23 0.14 9.4 7.4 0.0 1 23 1287 1310 1287 1310 0.90 9 23 0.0063 0.41 11.6 3.5 1 23 1315 1337 1315 1337 0.97 10 23 0.011 0.74 10.8 0.3 1 23 1343 1366 1343 1366 0.95 11 23 0.00048 0.032 15.1 0.9 3 23 1381 1401 1380 1401 0.98 12 23 0.0002 0.013 16.3 1.8 1 23 1449 1472 1449 1472 0.97 13 23 0.055 3.6 8.7 0.9 1 23 1531 1554 1531 1554 0.95 14 23 0.0011 0.07 14.1 2.0 2 23 1579 1601 1578 1601 0.95 15 23 0.045 3 8.9 0.1 2 23 1607 1629 1606 1629 0.94 16 23 0.011 0.74 10.8 0.2 1 21 1673 1693 1673 1694 0.95 17 23 0.0014 0.092 13.7 0.6 1 23 1704 1726 1704 1726 0.93 18 23 0.00013 0.0084 17.0 0.3 2 23 1818 1840 1818 1840 0.93 19 23 3.8e-07 2.5e-05 24.9 1.4 3 23 1847 1867 1846 1867 0.98 20 23 0.03 2 9.5 2.7 1 23 1886 1908 1886 1909 0.95 21 23 0.21 14 6.8 0.0 1 23 1930 1952 1930 1952 0.97 22 23 0.032 2.1 9.4 0.6 1 23 1958 1981 1958 1981 0.95 23 23 0.00017 0.011 16.6 0.5 1 23 1989 2012 1989 2012 0.97
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGAGTCGGAACCTCCCGTCCTTGCAAACAAAATAAAGGATTGTGTCTCTGTACAGataacCGAAAATGACGACCTGCCTACTAATGTCTGCAGGAAATGTATGGACAATGTAAATAACTGGCATATTTTTAAGTCTGTGTGTGAAAGGACACAAAACAAGCTAGAATCTCTATTGAAAAAAGATGGCAACCAACTAGAAGAGgtaaaaataaaaagtgaaccAGTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGTTCCTATCCAGAAAATGAGAATGCAGCCAATTCAGCCAAATTGCAACCAGAAGGCCCACCAATCTTGGCATCATTGGGACTCACGCCAAGGAGTGATAAGACATGTGTCGATCCTCGAATGGATTGGCACCGAGTCCATGCAATACTGGACATGGTTCAAGATGATGAAATTATAGATTCCCTCCAGACCACAGAGGAGTGTGATAATATGCATCAGTCCGATCATGACTCTGATTCTGAAACTGATCTTCAGCCCACAGATGATTGTtacattgattttaaaaatggatatttgtgtaaaaataaacaattactttCAAAGGATCCTAAGTTACCATCTTCATCTGtagttaaaattagtaatttgaGAAAGAGAAAGGTTGACAGTAATAGACATTATCCGTGGCCCAAAAATGCATGGCAAATGTTTTTGAGCAATGACATACTTGAAATTATTGTGGCTTCTACCAATGACAACATACAGAGGAATGGAAATGGTTTCTCCTCTTCTACAAATGTTGGTGAAATAAAAACGCTGATTGGAATTCTGTATCTTCATGGTATAATGAGGCCAACTCATCAAAAATCTCGTGATATGTGGCATCGCGACTATGGTGTGCCATGTGTTACAAACTTTATGAAATATGAAAGATTTAAATTTCTCCTTCAGAACATATGTTTTgataatgaagatgatgataGCATACTTCAATTAGATGTAATGAAACGTATGCGTAAAGTGTTTGAGATCTTTGCATTGAACTGTAGGACAGTTTTAGATGTACAAAATGTTGGAGTTATAGATGAGGTCATCATACCAGTATATGGTCCATGTCCTTTTCGTTACAGTATTGTAAAGAAACCTCTGAAAAGTGGTTTAAAATTGGTTATCTTAGTCGATCCATCTACTTTCTATGTTAGCAATTTGGATATTATAACGGATCCTTATTTTGGACCAAAACAGATAGTACAGAAATTGGTGCAGCATTTAGCTGGTACTGGGAAAACATTAATTATGGACAGTTGGTATATGTCCTTAGATTTGATACATGCTCTGAAAAATGAGTATCAATTGTATACCATAGCAGCTATAAATCCAAGGAATGACATTATTCCACCattatttatttcgaaatatAGAAATTCTCAGACATTTTTAACAGGATTCCTGAATACCGATACCGTGATTACGTCATATATGAATTCAGAATCAAAATCAGtgaatattataacaaatgatCCGACATTTTATAAGAAGGGACATAATAGAAGTACTACAGTCCTGTCTATGTATAAAAAGAACCAATCTGCAGTGGAAGTAGTTGATGTACTAATGAATTATTATACAACAATGCAACATACTAATGACTGGACTCTGTCATTATTTTTCACGTTACTTAATATAGCTTCAGTAAATGCTCAAGGCGTGGAGAGTGACAAGGAGGAAGAAGAGGATGAAGAAGAGGTAAATGAATCAGCTCAAGCTCAGTCGTTCTCTAATGTGGCTAATATGCCTGAAGTTTCTATTACCGTAATGCGACCCACAGGGGAGACCTTACACGCTCGTCAAGGTATCCAGCAATTAGCTTCTAAAGAATGTCTTGTTTGTGGCCGTTCTTATAGGTATTCGCATAATGCTAGGCGCCATGAACTCACTGCCCACAGCTTTGATAGGTACACCAATAAAATAACAACCAAAAAGTCTCATACGCATATGCAGCCTAAACTAAGACCCAATCCATTCAACCCAAAAGCGCGATTAATGCCGAGCCATAAGATGCAACTTATGCCTAAACCGGTCCCGAAATTAATGCCACAAAGAATTCAAGTTTCTCCAAAACCGATACTAATTAGAGCATCTAAAGCGCCACAAAATAATCTACCATATCCTCTTCGGATTAAAGCGTTAAAAgatttacaaataaagaaaaaggaaCCTCAAATTTTAAAGACATTACTTACATCTAAACCGGAAGTTTTAGTTTCTGAACCTGAAATTATAAATTCCGGCCCTGAGAGTCCTGAAACTTTAATATCCGAACCAGAAATTTCCTCTTTTCAAGTAGAGACTATTTTATCTGAGCCTGATACATATGATCAACCACAAGGTGATGAGGAGGTTGATGGTGAAGAAAATAATCAAACACAAAATTATGATACTGTGGATATGGATTCagaaaatgaaattgaaattgctCGACAGCAAGAGAATGATGGagatgaagatgaaaataatattgatcaAGACGTTGACGATAACGAACATGACGAAAACAAAGCTGATGTTATTCAGTGTGATGAAAAGGATCAAAATGAAGAAATTTCTGAAAAAACTGGAAATATAACAATTGAAAATAATGATGAACTAAaagttgaaaatgaaaataaagaagATGGTAATGAAGAAAGAGAAAATGAAGAACAGGAAGTGAATCATGAAGAAAATGAGGAAGAAGACGAGGAAGATCTTCCTCCAATGGAACTAGCACCTGTAGTGGAAATAAATGAGGATATGCAAACCAACTCCTATAATAGCGAGTTGaatgaagaagaagaagaactaGATGAAACCGCTGAACTTAATGAAGGCGAAGAGCCAATCAAAGAGCTTGATCCAGATAAACTTTATGTGACAAAAACACAAAGGGATTTTATAACAAAGTATCGAGACATCATAGAGCAGATAAATACTAAACGATGTCTTTGTTGCGATAGAGAACATCCTCGTAGAAAGGCCGTTATACAGCACTTACAGAAAAATGGGCATAAAGTTCCAAAACACACATGTTACAATTGTGTAGTCACGTTTGGACACATAGGTGCTTTACTTAGTCATATGAGATCTAACACGTGCACGGATTTGTGGAAGATAATTTATAACGAAAATGGAATAACAGACGATTTGGTTCTTGAAGATGAGCCTAAGGATAATAAAGTTCAATATAAAGATATCTTCAATGCTAGATCTTATGCATGCAAATTATGTCCGGCTAAGTTCCAACTAAAACAGTTCATTATGAAACATGTTTTGGATGTTCATGAGGATGGACAATCAAGAGTGCCACTCGCATGTGTTCATTGTGGATCTAGATTCAAAGATaagagtttaattaaaaaacatattcgtAATGGCGAATGTACAGTTTATATTGCTTGTGATTTATGCACAGAAAAATTTGGTAATATGCAAGATTTCAGTGATCATGCTTTAGCTGTTCATGCAGGAAGCTTCGATCAATCTGATAATCAGAACAAATGTGTCGATGGACGACCAACGGACTGTCCTATCTGTGGAAAGAAGAATAGCAGCTATCCGAATTTGGTCAAACATTTAAAGATTATTCATAATGAAGAAACACCTCATTATTGTCAACATTGCGACTCGAAATTCGAACAAGCTGCTGATcttaacaaacatatttatatagaacaTTCAGACAGAACGTTAGGCGTACAGACTACTGAACCTGATATGTCTCTTGTAAAAGAGGAAGCTGAAGAGTATCACTATTCGTGTACGGAATGTAATGCTATTTTTGAAACCGTTGATGCTTGGACAGATCATCAGGTTGCAGAACATAACCAAGTCGCTCATCATTGTGATCAGTGTGACAAGAAATTCTTGCGACCGTCTGAACTCGCTGAACACAAGAACACTCATTTGCGTGTGAAATTTTATCCCTGTAGTATATGTACTAATTCATATAGTACACCTCAGAAATTGTCTGAACATGTCCAGCAAATGCATCCTGGAGTTGGTGTGGGAATCACCCCTGGCTTTCCCTCTTTTTGTGAGATTTGTGTAAGATCTTTTAAAAGCCGTCAAGCATACTCTAACCATATGCGTATACATGCAAAAGTGCCTACTACAAATCGAAAACCAGGTGAAGCCAAAGGATTTGCACCACAGATTATTGGAAAACCAATCAGACAATTTTCGGCAGTACAACCCGGTTTTGTTTTCAAGCCAAATTGTAATGTTCCTAACGCTCCTTATTCTTGTGATATTTGTGGCAAAGGATTTAtgcataagaaaaatatatggaaACATAAGAAAGTTTTGCATGCTGATCTTCTAAATGACAGAAATGACAGTGAAGAAAATACTATGCAAGCTTCTACTGAAGAGGATGAGTATAATGTCGATGAAAATGGTGCAATTTTATCCACACCACAGTTCAACAGTTTCAATTTTGCTAACTTTACTAATAATGTACAAACAGCAGAGGACCCAATGCCCTTCTCATGTGAACTTTGTTTCAAAAGATTCCCTATTGTAACTAGTTTGTGGAAACATAAACGCGCTAAACATGGAATTATCAATGCCAGTGCCGGAGGTAGCTCTGAAACTCAAACATCAGCTGGCGAGGGTAGCAGTAGATCTAGTTGCACTATATGTAAAATATCATTCTCtgataaaaaatcatattaccGACACAGAAAAAATGTTCATAAATCTAGTGTACAAATGTGTAAGATTTGCGGTAAACCTCTGAGTTCAACATTAGAACTCTATGAGCATCTGAAAGCTGCACATGCTCGAGAACTCTTGGGTTATAATGCCAATCAAGGATCTAGTAAAACTCAGGATATGAAAGAAGAAATTGATGTGGAATATGATAACGACCAAGATTCAGTTGATCCAAGCGTCGATTACCAAGCTCGCTACCCATGTGATACTTGTGGTAAACAATTTGTTGGGTTACTCGCCTTACAGAATCATCAATGTATAAATCAGATTCAATCACAACCACAAACTTTTGATTGTGAAATTTGTCACAAGAGTTATACGTCGATAGCAGCCCTTAAAAGTCACCGTGGTTGGCATTTACGGTCTCCAGATGGAAAAGCAGCTGCAAACAATAGCGGATTGTGGATGCCCCAACACAAAGTGACAAGTAAGATTAGCAAACATGAAGTCGTGGATCCTGTTCAATTGGCTCGTGTTCAACATTCAACCACCCCAACCTCAACTGTTGTCAAAAGGAAGTTACCTCCAGAAGTGGAAGTAACTGTTGTCAACCCAAATAAGAAACTGCGCTCCGATGATTCTCTAGAAATGgaacaacaaaataatttatcggGTAGTGTAGAAGACAGATATTGCACAATTTGTGATAAAGAATTCACGAAACGAGCTGCATATCAACGTCACATGGACGAAGTTCATCAGCCCAATTCGGTGTTTTGCCCTGTCTGTGACAAAAGTTTCACTAGAAAATCGACATTGCTCGTCCACATGAAGAAACATTATGAAGGTGGTCAGGGTAGTTCATCTGGAACAGCTCAAGGAGAGGATGAAGTCCACACATGTGATTTGTGTGGCGCTCAGTACGAAAATGAGAAAGCACTGCGATCTCATCGTTCGAGACACCATGGTGAAGAATCTGAGGAATCGGAAGATGACGGAGGTGCACCTATTGCACAACCTGGCGAGTTTACGTGTGCCCAGTGTGGCGACGGAGTTGCTACTCCTCGCGATTTAATTGCACACCGCACCATGCACGCGACTCCCACAAAATTCTTTTGTAACATATGCAAAGTATACTTTGCCAGAGCTTTGGACTTATCATCTCATACTCGCGCAAGACACTCGGACAACGAAAAGGTTTTTTTTCCCTGTGCCATGTGTGATCGCTTTTATATGAACAAGAAGAGTTTACAACGGCACATAGAAACGGCTCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDESEPPVLANKIKDCVSVQITENDDLPTNVCRKCMDNVNNWHIFKSVCERTQNKLESLLKKDGNQLEEVKIKSEPVSDEAYDDGVVIDGSYPENENAANSAKLQPEGPPILASLGLTPRSDKTCVDPRMDWHRVHAILDMVQDDEIIDSLQTTEECDNMHQSDHDSDSETDLQPTDDCYIDFKNGYLCKNKQLLSKDPKLPSSSVVKISNLRKRKVDSNRHYPWPKNAWQMFLSNDILEIIVASTNDNIQRNGNGFSSSTNVGEIKTLIGILYLHGIMRPTHQKSRDMWHRDYGVPCVTNFMKYERFKFLLQNICFDNEDDDSILQLDVMKRMRKVFEIFALNCRTVLDVQNVGVIDEVIIPVYGPCPFRYSIVKKPLKSGLKLVILVDPSTFYVSNLDIITDPYFGPKQIVQKLVQHLAGTGKTLIMDSWYMSLDLIHALKNEYQLYTIAAINPRNDIIPPLFISKYRNSQTFLTGFLNTDTVITSYMNSESKSVNIITNDPTFYKKGHNRSTTVLSMYKKNQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESDKEEEEDEEEVNESAQAQSFSNVANMPEVSITVMRPTGETLHARQGIQQLASKECLVCGRSYRYSHNARRHELTAHSFDRYTNKITTKKSHTHMQPKLRPNPFNPKARLMPSHKMQLMPKPVPKLMPQRIQVSPKPILIRASKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEISSFQVETILSEPDTYDQPQGDEEVDGEENNQTQNYDTVDMDSENEIEIARQQENDGDEDENNIDQDVDDNEHDENKADVIQCDEKDQNEEISEKTGNITIENNDELKVENENKEDGNEERENEEQEVNHEENEEEDEEDLPPMELAPVVEINEDMQTNSYNSELNEEEEELDETAELNEGEEPIKELDPDKLYVTKTQRDFITKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLACVHCGSRFKDKSLIKKHIRNGECTVYIACDLCTEKFGNMQDFSDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYIEHSDRTLGVQTTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSEHVQQMHPGVGVGITPGFPSFCEICVRSFKSRQAYSNHMRIHAKVPTTNRKPGEAKGFAPQIIGKPIRQFSAVQPGFVFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDEYNVDENGAILSTPQFNSFNFANFTNNVQTAEDPMPFSCELCFKRFPIVTSLWKHKRAKHGIINASAGGSSETQTSAGEGSSRSSCTICKISFSDKKSYYRHRKNVHKSSVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKTQDMKEEIDVEYDNDQDSVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPVQLARVQHSTTPTSTVVKRKLPPEVEVTVVNPNKKLRSDDSLEMEQQNNLSGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGQGSSSGTAQGEDEVHTCDLCGAQYENEKALRSHRSRHHGEESEESEDDGGAPIAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIETAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -