Basic Information

Insect: Galleria mellonella
Gene Symbol: -
Assembly: GCA_958496185.1
Location: OY292296.1:14846970-14849476[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.5e-05 0.0036 18.1 0.3 1 23 200 222 200 222 0.98

2 16 0.0046 0.3 12.1 0.9 6 23 233 250 232 250 0.99

3 16 5.4e-06 0.00035 21.3 1.6 1 23 256 278 256 278 0.98

4 16 6.8e-06 0.00045 21.0 1.0 1 23 284 307 284 307 0.96

5 16 2.9e-05 0.0019 19.0 1.1 1 23 313 336 313 336 0.95

6 16 3.2e-05 0.0021 18.9 0.4 2 23 343 364 343 364 0.97

7 16 2.1e-06 0.00014 22.6 3.0 1 23 370 392 370 392 0.98

8 16 0.0011 0.074 14.0 2.1 1 23 398 420 398 420 0.95

9 16 0.00022 0.014 16.2 5.1 1 23 426 448 426 448 0.95

10 16 0.0002 0.013 16.4 4.3 1 23 454 476 454 476 0.98

11 16 3.2e-07 2.1e-05 25.2 3.3 1 23 482 504 482 504 0.99

12 16 0.0013 0.088 13.7 0.2 3 23 512 532 510 532 0.96

13 16 3.3e-07 2.2e-05 25.1 1.5 1 23 538 560 538 560 0.99

14 16 0.019 1.3 10.1 4.5 1 23 566 588 566 588 0.97

15 16 2.3e-05 0.0015 19.3 2.4 1 23 594 616 594 616 0.98

16 16 7.8e-06 0.00051 20.8 1.9 1 23 622 645 622 645 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.5e-05	0.0036	18.1	0.3	1	23	200	222	200	222	0.98
2	16	0.0046	0.3	12.1	0.9	6	23	233	250	232	250	0.99
3	16	5.4e-06	0.00035	21.3	1.6	1	23	256	278	256	278	0.98
4	16	6.8e-06	0.00045	21.0	1.0	1	23	284	307	284	307	0.96
5	16	2.9e-05	0.0019	19.0	1.1	1	23	313	336	313	336	0.95
6	16	3.2e-05	0.0021	18.9	0.4	2	23	343	364	343	364	0.97
7	16	2.1e-06	0.00014	22.6	3.0	1	23	370	392	370	392	0.98
8	16	0.0011	0.074	14.0	2.1	1	23	398	420	398	420	0.95
9	16	0.00022	0.014	16.2	5.1	1	23	426	448	426	448	0.95
10	16	0.0002	0.013	16.4	4.3	1	23	454	476	454	476	0.98
11	16	3.2e-07	2.1e-05	25.2	3.3	1	23	482	504	482	504	0.99
12	16	0.0013	0.088	13.7	0.2	3	23	512	532	510	532	0.96
13	16	3.3e-07	2.2e-05	25.1	1.5	1	23	538	560	538	560	0.99
14	16	0.019	1.3	10.1	4.5	1	23	566	588	566	588	0.97
15	16	2.3e-05	0.0015	19.3	2.4	1	23	594	616	594	616	0.98
16	16	7.8e-06	0.00051	20.8	1.9	1	23	622	645	622	645	0.97

Sequence Information

Coding Sequence: ATGAATATAGAAAACATCAAACAAGAACCAAAACATGAAAATAGTCAAATCATCAGCAACCTTGTTATATCCATCAAGCAAGAAGTTTTAGGGGATGATTCAGATGATTCTTTATCTGAACAAGAATTTAACTTCAATCATGGAAATTCTCAGTCAAGGGTTTCAGGTACATTTTCTGGAATGCCAACCAGCAAGGAAAACGCAGAATCTATATTGACACAAAAAGGTGAAGGTATGACTTATTTTATGGAAGTAGATACACAATATCCCAAAGTTAAAATTGAAAAGGTCGAAGTAGAGGAAACAAATGTAGGTGATACAGGACAGGACTTTTCTGGAGTCAACgagaatactatatttattaaagaggAAAAGCATGATATTGCCAGAGACGAAGAGGATGATAACGCTTTGAAGCTACATACCATAAAATCTGAACAAGATGGATCTGATGATGAATCAAACAATACATTGGGTGGTAATGATGGTTCACCTAAAATTCATGAACGGAAGGTTGAAATTGCTGCAAAACCTGATACAAGCCGAAATTTATTATCAGCTGATATGCTATCTGATGGTGAAACTCCAAATGGCGTGTTCCCATGTGATATATGTGATGAAATATTCCCATCCATGAAACACTTGCGGGTCCACACTCAGATACACATTGATCTGGCAACACACAGCTGTATACCGTGTCAACGAAGCTTCTGTGGCCTCAAATCGCTACGCCGTCACATGATGATCCACACCGGTGAAAGGCCATACAGCTGTGAAATATGCGAGATGTCCTTTAAAGACAATTCCAGTTACAATCGTCATAAACGACTTCACAATGGCGAGAAAACACATATATGTGAAATTTGCAAAATGAGTTTCAGAGACAACTCTAGTTTGGACCGCCATATAATGCGAGTACATAAAAATGAGAAATCCTACAATTGTGAGTCCTGTGACCAAAGTTTTAGTACAAGTGTCCAATTACAACACCATATAGGGAAAGTTCATACTGATAAAAAATCCAACACCTGCGAAGAATGTCAGCAAAGCTTCTCAGCGGCCAGGTCCCTGAGGCGACACATGTTGATTCACACTGGTGAGAGACCCTACAAGTGTGACATTTGCGAAAAGTCTTTTAGAGATAACTCTGCTATGCACCGTCATAGACGGCTGCATACTGGCGAAAAGCCGTTTCTTTGTAAAGTGTGTGAGAATTATTTCAGAGATCATACCCAATTGAGTATTCATATGCGAGTCCATACAGGTGAGAGGCCCCATTGCTGTGTATACTGCGAGAAGTCGTTCAGGGACCGCACGCAGTTGAGCATCCATACACGGATCCACACCGGCGAAAGACCATTCAATTGCGAAGTATGCATGAAATGTTTCAAAGATAAGAGGTCGTACAAAATTCATATGCGAATCCACACTGGTGAGAAGCCATATAAATGCTCTGAGTGTCCTAAATGTTTTAGAGACAATACTCTGTTGAAACAACATTTGCGTATACACTTCCGTGAACCGCAATCGAATTGTGTAGAATGTAAGAAGGGTTTCGCGGATGATGCACAGATGCAAATTCATATGCAAAGACACACAGGCGAGAAACCGTACTCCTGTACTATGTGTGTTAAGAGTTTCAGAGATATGTCACAGTTACGAATTCATATGCGAACCCATACGGGCGAGAGGCCGTTCTCCTGTACAGTGTGTCAGAGCGCCTTCAAATCCCGTTCAGATTTAAATTGTCATATGCATATCCATTCTGATGTGAAACCGTTTAGTTGTGAAGTGTGTGGTAAaagttttagatttaaaaaacgTGTCCGGTATCATATGCGGATCCATACGGATGAGAGGCCGTATCCTTGCAAATTATGCGAGCAGCGGTTTAGAGTGAGCGGTCACTTAAAGAAGCATATGAATTCTATCCATGCTAAAGAAACCATAGAAATAATTGTACCTGATTAA
Protein Sequence: MNIENIKQEPKHENSQIISNLVISIKQEVLGDDSDDSLSEQEFNFNHGNSQSRVSGTFSGMPTSKENAESILTQKGEGMTYFMEVDTQYPKVKIEKVEVEETNVGDTGQDFSGVNENTIFIKEEKHDIARDEEDDNALKLHTIKSEQDGSDDESNNTLGGNDGSPKIHERKVEIAAKPDTSRNLLSADMLSDGETPNGVFPCDICDEIFPSMKHLRVHTQIHIDLATHSCIPCQRSFCGLKSLRRHMMIHTGERPYSCEICEMSFKDNSSYNRHKRLHNGEKTHICEICKMSFRDNSSLDRHIMRVHKNEKSYNCESCDQSFSTSVQLQHHIGKVHTDKKSNTCEECQQSFSAARSLRRHMLIHTGERPYKCDICEKSFRDNSAMHRHRRLHTGEKPFLCKVCENYFRDHTQLSIHMRVHTGERPHCCVYCEKSFRDRTQLSIHTRIHTGERPFNCEVCMKCFKDKRSYKIHMRIHTGEKPYKCSECPKCFRDNTLLKQHLRIHFREPQSNCVECKKGFADDAQMQIHMQRHTGEKPYSCTMCVKSFRDMSQLRIHMRTHTGERPFSCTVCQSAFKSRSDLNCHMHIHSDVKPFSCEVCGKSFRFKKRVRYHMRIHTDERPYPCKLCEQRFRVSGHLKKHMNSIHAKETIEIIVPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -