Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_958496185.1
Location
OY292296.1:6297678-6307154[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.17 1.8e+02 2.8 0.0 22 36 224 239 204 248 0.77
2 5 4.2e-08 4.5e-05 23.9 0.1 1 45 255 301 255 302 0.95
3 5 2.1e-09 2.3e-06 28.1 0.3 2 44 309 355 308 357 0.94
4 5 1.8e-10 1.9e-07 31.5 0.0 1 43 361 403 361 405 0.97
5 5 2.6e-06 0.0028 18.2 0.0 4 45 414 457 413 458 0.92

Sequence Information

Coding Sequence
ATGGATATAGATAGTGACGAAGAAACAGAAATACAATTAAAAGAATTGAAACAACTTACCGCCGTTCTAGAAGCTGACGATGTACCAGTTAGTAATGATACCACTTCGCAGTGCTCTAATACTCTCAGTAGTTTTCCTATGTCTAGCTTAAAAGACTCTCAGAAGTACTCCAAAATAGAAATGGCTTtagcattaaacaaatatacagatgaAAAATTGCAAAGACTAGAGAGAATGCTACATGCTCGATTACAGGAATGTAAATTGGAATTATTAGAAATAGATACTAATGCTGGAAAACAGGAAAGAGTAGAATCTTTCCATTACATTAATTGTGGTAGAccttattttaaagataaagaCAATTATCCGGCACCAAGTAATGAAGACACAATTCTCATGCAAGAAGCGGAGATGTTTGATTTTTATTCTGTAGTTTCTGTACCAGGGTGGACTGTTAAAGATAAAAGTGAATTCTTGGGTATAATACTAAAAATGTCACAGACTATAAGAACATTTGAATTGAATTCTCAAATAGCCCAAGTACGAAGagagattaaatttaaaaaaatacaatcagatAAAACTTTACAAACTTTGAATGCAAAGTTGAATGTTGTTAATAAGTTACCGTTAAAAGATATAGCTTTACCAATAGACCAAGAATATGATTGGGAAACTATTGCTAACAAACTGAACCATAGGCATACAGCACAAGAATATAGATCTTTATGGAAATTATTTCTGCAtccatcaataaataaaaatagttggaCCAAAACAGAACATACAAATCTACAGACAATTGCATATGATCATTCTTTACAAGATTGGGATAAAATTGCACAGGAATTAAAATCAAATCGAACAGGTTATCAGTGTTTCGTATACTTTCGTaccaatatgaataataactttACAGGACAGAAATGGActaaagaagaagaagaatatcTTAAAAGGcttattgaatattataaagaagatgAATATATACCTTGGGGCAAAGTAGCAGCTGCAATGGAGAACCGTACTAAAATACAggtttataacaaatatttcagACTTATTGAACAAAGAAAAGGTAGGTTTTTACCTGAAGAAGACACTGTAATTCTTACTTGTGTTGATAATTTTGGTCCTAActttaaaagaataaagaaatatctTCCTAGTAGATCAGTAATACAATTACGTAATAGGTaccacttattaaataaaaagagcaTATCAATAGTATGGACAGTAGCagaagataaaaaattaattcagcTGATGGCTAATCAAGATTCTAGTATCAATTATTCTAGTATTAGTTCACATTTTCCTGGCAAGGATAGAGGAAATTTAAGAGCcagatatattacattaaagaaGTGGATGAGACAAAATCCCAATACTGATATTGCATTAGCACCACGCCGAGGAGCACGGCGTCTAACTCATGGTCGTGTttctcaaaatttaaataaagccaTTGAAAAACTGAAAAATCGTATACAAATTGaagttaatacaaaaaaatcaaatagaaTCACAGAAGAATCATCAGAACAGGAAATAGAAGATGCTATAATAGCTGCCCTAGCTACTGAATCTATAAATGAAGAGGAATCAAATAGCACCACTGATGATGTTGTAGTACAAGCAGTACCTGGAATAACAATACCAAGCATACAAAATCTAACTATAAATAATGAAGTGATAGATTTAAAACAAGCAGAAGGTAAAGAAGAAGTTACATTGGAGACCTATAATGGGGATAGTTTGCCAAGCTACCTTTGTTCGGAGTGCTGTGGCTATGTCACACATTTTACCAAGTTCCGTGAAAAATGCCAGAGAGCAAATTTTGCTCTACAAGAAATGCTAGCTAGGAATGTGGAAataaatgaAATAGTTCTTGATGATTTTAATTGTGAAGTAATTGGTATTGAACCTAAACTCTGGTTCATAGATCCATGTACAACACATTATGAAgaagttaaatataaatcagATGATCATAAGGAAATAACTACACTTCCAACTGGTTACATTCCAGTACTCCACTATAACATACTTCCAAATGAAGACTCATTtagtattaaaaacaaaatttctacaaatttagaaaaaacagaaataactAATGTGCAATTGGAAAAGACAGAAGACACTGATACTATTGtgattgatgatgataatggatCTGAAAATAGTGACTTGAATGTGGAGCAAAATGGTGTGAAAGAATTGACAACGAAACAAAATGACAATAGTCAGGAACAAAATGATCTCTTTGATAGTGATATTGTTGTAAATGATGATGACAAAGTGCAAGATTCTGATAATGTATCACAAAAATCAGAAGCGAATGAGGTGTATGTAAAACCATGTATGGTTGAAGAGTATGCTAATGTGTACACAATAACTATGCAAGAGGCAAAAGCGGCTTATGAGATTCATAAAATGTTTAGCTCCGGTAATTACCGTTGTGAAATCTGTAACAAAGCATATTCTAATAAAAGACTTTTCCAAATTCATTTACGTATGCATGACAAGATACTGACCGGTCACGGTTGTTTCGGTCAGTACCTGTGTCAGATTGCGAGAAGAGAGCCGACAACTGAGTGCCATGAGTGTGGTTGCGACCGGGACACAGCGCAACATGTTCTAGAAGAATGCCCATCGTTCAGTGCGGAGCGCCTCGTCCTGGTTGCGGAAGTGGGGGATGACCTCTCGCTGCCGAATATAGTTCAGTCAGTAGCGAGAGGTCGTGGAACGCAATGCTCACCTTCTGTGAAGCGGTGA
Protein Sequence
MDIDSDEETEIQLKELKQLTAVLEADDVPVSNDTTSQCSNTLSSFPMSSLKDSQKYSKIEMALALNKYTDEKLQRLERMLHARLQECKLELLEIDTNAGKQERVESFHYINCGRPYFKDKDNYPAPSNEDTILMQEAEMFDFYSVVSVPGWTVKDKSEFLGIILKMSQTIRTFELNSQIAQVRREIKFKKIQSDKTLQTLNAKLNVVNKLPLKDIALPIDQEYDWETIANKLNHRHTAQEYRSLWKLFLHPSINKNSWTKTEHTNLQTIAYDHSLQDWDKIAQELKSNRTGYQCFVYFRTNMNNNFTGQKWTKEEEEYLKRLIEYYKEDEYIPWGKVAAAMENRTKIQVYNKYFRLIEQRKGRFLPEEDTVILTCVDNFGPNFKRIKKYLPSRSVIQLRNRYHLLNKKSISIVWTVAEDKKLIQLMANQDSSINYSSISSHFPGKDRGNLRARYITLKKWMRQNPNTDIALAPRRGARRLTHGRVSQNLNKAIEKLKNRIQIEVNTKKSNRITEESSEQEIEDAIIAALATESINEEESNSTTDDVVVQAVPGITIPSIQNLTINNEVIDLKQAEGKEEVTLETYNGDSLPSYLCSECCGYVTHFTKFREKCQRANFALQEMLARNVEINEIVLDDFNCEVIGIEPKLWFIDPCTTHYEEVKYKSDDHKEITTLPTGYIPVLHYNILPNEDSFSIKNKISTNLEKTEITNVQLEKTEDTDTIVIDDDNGSENSDLNVEQNGVKELTTKQNDNSQEQNDLFDSDIVVNDDDKVQDSDNVSQKSEANEVYVKPCMVEEYANVYTITMQEAKAAYEIHKMFSSGNYRCEICNKAYSNKRLFQIHLRMHDKILTGHGCFGQYLCQIARREPTTECHECGCDRDTAQHVLEECPSFSAERLVLVAEVGDDLSLPNIVQSVARGRGTQCSPSVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-