Gmel018106.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292303.1:12189985-12191733[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-10 1.9e-07 31.1 0.1 3 40 17 54 15 59 0.90 2 2 5.6 3.7e+03 -1.8 0.1 19 32 446 459 443 459 0.86
Sequence Information
- Coding Sequence
- aTGGTGTTTAAGTACAAACGTAAAACAAATCAAGCTTCGTGGTCAGAAAGTTCTTTACAAAAGGCTATACAGGAAGTAAGAGAAGATAAAAAATCTATCAATGCAACAGCTAAAAAATATGGTATACCTTATGGTACCTTGTATAGACATCTCAAATCTGGTagtcatataaaaaagttaGGCAGATTTACTCCAATATTCACTTGTGATCAAGAACAAGAGCTATGCGAATACTTACAGAAGTTGGACAGCTTGTTCTTTGGTTTGACTCGTAACGACTTTTTAGTATTAGTTTACGTCTATGCcgaaaaaaataacatcaacCACCGATTCAAGAATGGAAGAGCAGGTGATGATTGGTTTGCTGGCTTTAAGGTAAGGCATCCTGAGATAGTACTACGATCTCCAGAACCCACTTCTTTAGCGAGAACGCGAGGGTTTAATAAACCCCAAGTTGAATTATTCTATGCAAATTATTGGAGTCAAGTTGAAAAACACAATTTTGATCCCACCACGATTTATAACATGGACGAAACAGGTGTGAGAATGACAACTTCTAAGCCACCAAAAGTGTTAAGTGTCAAGGGTAAGAAACAAGTTGGTGTCATAGGGAGTACTGAAAGAGGGCAATTAACAACAGTCATATGTTGTTGCAACGCTGCTGGTACTTTTATAccaccattttttatttttgctcgGAAGAGAATGCAGGAAAGACTATTAGATGGTTCACCACCTGGTTCACAAGCTACAGTAAGTGATAATGGTTGGATAAATGGACCagtatttttaaattggctTCAATATTTTGTTAAGAAAACTCGACCTACTAAAGATAGGaaagtattattacttattgaTAATCATGAATCACATAAATATTATCCAGCTTTGGAATATGCAACTAAAAATAATGTCGTGTTTGTCTCATTCGCACCTCATACAACCAATCGTATGCAGCCTCTGGATGTCGCCGTTTACGGCCCCCTTAAGAAATATTTTGAGCAggaattaaatatattccaaaAGAGCCATCCAGGCAGAATTATAAACCAATATGACATTGCACGAATATTTAGTGGAGCTTACGTAAAGAGTGCTTCTGTACACAATGCAATTCAAGGTTTTCGAAAACCCGGTATTTGGCCCTACAATCCTCATGTATTTAGTTATGAGGATTATATGCCTTCGACCATGACGGATCGTCCGTTGAATTCTGTAACAAGTCCCTCACGTCCGGGGCAAGTAGAAAGTAATAGAACACCATCTCCTTCGATTTTTCAAAGTATAAGTAGTGAATCACTTATAACTCCATCGTATTTAGAAAAAGGTAATGTTTCACAATCTGCTACAGAATATGATGCCAGCCATAGCAGCCATATTAATATGCCTTCTATCTGTACACCAGGTCCTTCTTCTATGACAGAACATACCCACCAAGTAATATCGACCTCTATACAGTCTGATTTACAAGAGATGAGTAATTCATCTTCAGCAACAGTTACCATTTCACCATACACAATAAGGCCAATACCAACTATGGCTGCTTCAAAAACTAATAAGAAACGCAGATGCCAAAAGTCAATGATATTAACTTCTACACCTGTTAAAAACGAACAagctataaaatacaaaaaaaatgataataagaAAACTAAAATCTCAGATTTAGATGTCAAGAAAAAGGGAAAAGGAAAGGAAAATATGATAGCGAGAGGAAAAGTCAagactaagaaaaaaaatacataa
- Protein Sequence
- MVFKYKRKTNQASWSESSLQKAIQEVREDKKSINATAKKYGIPYGTLYRHLKSGSHIKKLGRFTPIFTCDQEQELCEYLQKLDSLFFGLTRNDFLVLVYVYAEKNNINHRFKNGRAGDDWFAGFKVRHPEIVLRSPEPTSLARTRGFNKPQVELFYANYWSQVEKHNFDPTTIYNMDETGVRMTTSKPPKVLSVKGKKQVGVIGSTERGQLTTVICCCNAAGTFIPPFFIFARKRMQERLLDGSPPGSQATVSDNGWINGPVFLNWLQYFVKKTRPTKDRKVLLLIDNHESHKYYPALEYATKNNVVFVSFAPHTTNRMQPLDVAVYGPLKKYFEQELNIFQKSHPGRIINQYDIARIFSGAYVKSASVHNAIQGFRKPGIWPYNPHVFSYEDYMPSTMTDRPLNSVTSPSRPGQVESNRTPSPSIFQSISSESLITPSYLEKGNVSQSATEYDASHSSHINMPSICTPGPSSMTEHTHQVISTSIQSDLQEMSNSSSATVTISPYTIRPIPTMAASKTNKKRRCQKSMILTSTPVKNEQAIKYKKNDNKKTKISDLDVKKKGKGKENMIARGKVKTKKKNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00736561;
- 90% Identity
- iTF_00736561;
- 80% Identity
- -