Gmel015413.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292300.1:3279005-3279580[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 6.8e-09 35.7 0.0 3 39 16 53 14 58 0.88 2 2 8.8 5.8e+03 -2.4 0.0 26 35 86 95 85 99 0.83
Sequence Information
- Coding Sequence
- atgCCTCGAAACTATATACGAAAGACTGAATCGAAATACAAAATTGAAGATCTTCGCCATGCAGTTGAAGATGTTAGAAGTAAGAAGCTCACATTAGGCCAAGCTGCTACCAAATATTCAATACCAAAATCAACATTAttcaaacaattaaaacaaaataaagtcaAGACACTAAAAAAAGGTCGATCTGCTGTATTTAATAGAGAACAAGAAGACCAgctagaaaaatatatacttgatTGCTGCAAGACTTTTTATGGAATAACACCAAGTTCATTACGTAAAATTGCTTTTCGATTTGCTGAAGCTAATAAgctgaaacacaattttaacaaAGAAACCCAGCTAGCAGGCAAAGACTGGTACTATGGCTTCATGTCTCGACATCCTTCCATCAGTTTACGGATACCAGGAGCTACTTCACTTAATAGAATAACAGCTTTTAACGTCACCGAAGTGAATCTGTTTTTTGATCAACTAAAAATGATCCAAACAAAACACAATATACCTGGTCatcgtatttttaatattgatgaaACTGGCATTAAcacagttaaaaaaattacacaattttaG
- Protein Sequence
- MPRNYIRKTESKYKIEDLRHAVEDVRSKKLTLGQAATKYSIPKSTLFKQLKQNKVKTLKKGRSAVFNREQEDQLEKYILDCCKTFYGITPSSLRKIAFRFAEANKLKHNFNKETQLAGKDWYYGFMSRHPSISLRIPGATSLNRITAFNVTEVNLFFDQLKMIQTKHNIPGHRIFNIDETGINTVKKITQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00736557; iTF_00060118;
- 90% Identity
- iTF_00736557;
- 80% Identity
- -