Gmel017196.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292302.1:6944915-6945961[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-12 6.7e-10 39.0 0.0 2 37 16 52 15 57 0.89 2 2 8.2 5.3e+03 -2.3 0.0 20 40 168 188 167 191 0.65
Sequence Information
- Coding Sequence
- ATGCCAAAATTCAAAGGAAGGATTACGCCTAGAGGAAATTGGGacgaaaataaaatgaaacaggCTATAAGATGTGTACTGGAAAAAAAGATATCGGTGAGAGAAGCAGCTGAGAGATATGATGTGCCGAGAAGCACCCTTCAGGATCGGATAAAAGCTGTCGGTAGTGGACAAGAAGCACAGTTCAAGCCAACACTAGGGAGATATGAACATACCTTCTCAGAAAATCAATCACTGCAATTATATAACCATGTCAAAGACCTCGATAATCGCCTGATGCCGCTGACCAAAGTAGAGTTTTTGAAATTGGCATTTCAATTTGCAGAACGTTTAAAAATACCTCATAGGttcaataaagaaaagaaaatggccggcaaagatttttattatagctTCATAAAGAAATACCCAGATATTGCTCTCAGAAGTCCAGAGTCAACCAGCATTGCAAGAGCCGTTGGGTTTAATAAACCACAAGTCTATCGGTTTTATGATCAGCTCCACCAACTACAAGATAAATACAAATTCCCTGCCTCCAGAATATACAATGCTAATGAAACGGGGGTCTCCACTGTACACAAGAATGAGAAAGTTATTTCTACTAAGGGAAAAAAGCAAGTTGGCAAGTTGACTTCTGGTAAAAGAGGACGAAACATTACATTGATGTTTGCTATGAGCGTGTGCGGCCATTTTATACCTCCACTTTTTATTTTCCCGAGGAAAAGGATGGATAAAAATGGTCGTTTGATGATTGGAGCTCCACCAGATAGCATTGCTATTCCACACGAAAGTGGTTGGATGAATGGtgagatatttttaatgtgGCTCCAGCATTTCAAACAGCACGTACAGCCTTCGAAGGAGAACCCTGTCCTTCTGATTCTCGATGGACATGGAAGCCATAAAGAGTTGGCAGTGATAGAATTTGCTCGAGCTAATCACATCCATATGATTAGCACTCCACCACACACAACACACAAGGTGCAACCTCTGGACAGGGTATTTTTCAAGCCGTTTAAGTCTGCATTTGGTTCAGCAAGTGGATGA
- Protein Sequence
- MPKFKGRITPRGNWDENKMKQAIRCVLEKKISVREAAERYDVPRSTLQDRIKAVGSGQEAQFKPTLGRYEHTFSENQSLQLYNHVKDLDNRLMPLTKVEFLKLAFQFAERLKIPHRFNKEKKMAGKDFYYSFIKKYPDIALRSPESTSIARAVGFNKPQVYRFYDQLHQLQDKYKFPASRIYNANETGVSTVHKNEKVISTKGKKQVGKLTSGKRGRNITLMFAMSVCGHFIPPLFIFPRKRMDKNGRLMIGAPPDSIAIPHESGWMNGEIFLMWLQHFKQHVQPSKENPVLLILDGHGSHKELAVIEFARANHIHMISTPPHTTHKVQPLDRVFFKPFKSAFGSASG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00709117;
- 90% Identity
- iTF_00709117;
- 80% Identity
- -