Basic Information

Gene Symbol
kn
Assembly
GCA_958496185.1
Location
OY292292.1:6339226-6353303[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-141 8.1e-138 460.7 0.0 178 387 27 254 17 257 0.98
2 2 4e-07 0.002 17.0 7.2 420 469 263 314 255 431 0.60

Sequence Information

Coding Sequence
ATGAATCCGAAGGGTGTTGTATCCACTCCATTAATATCTAGAACTGTTGGCACAGCAATATTCGGCACGGCTTTACCGGTGCCTCGGGCTATATTCTTTCTGAAGTTCTTTCTAAAGTGCAACCAGAATTGTTTGAAGAATGCCGGCAATCCACGAGACATGAGAAGGTTTCAAGTGGTAATATCAACACAAGTGATGGTGGACGGGCCCCTGTTAGCGATATCAGATAATATGTTCGTTCACAATAACAGCAAACACGGCCGACGAGCAAAGCGACTAGACCCCACTGAAGGTATTGACGGCGCGCCAGAGCCTACTTCTGGTCTATACCCTCCCTTGCCGGTAGCAACGCCGTGCATCAAAGCGATATCACCAAGTGAAGGATGGACTTCAGGCGGTTCAACAGTCATAATAGTTGGAGATAACTTCTTTGACGGACTGCAAGTTGTTTTTGGAACGATGCTTGTTTGGAGTGAGctgATAACGTCACACGCAATAAGAGTACAAACACCACCGAGACACATACCAGGGGTCGTTGAAGTAACGCTTTCTTACAAGAGCAAACAATTCTGCAAAGGAGCGCCAGGAAGATTTGTCTATGTTTCAGCTCTCAACGAGCCTACCATAGATTACGGGTTTCAGAGGCTACAGAAGCTGATACCGAGACATCCTGGTGATCCGGAAAAGTTACCAaagGAAATAATTCTAAAGAGAGCAGCTGACCTGGCCGAAGCTCTATACTCTATGCCTCGTAACAACCAGCTAGGGCTGGGCGCACCTAGGTCGCCACCAGCCAGTATGCCCTTCAATTCATATACTGGACAATTAGCTGTTAGTGTTCAGGACACCGCAGCGTCGCAGTGGACTGAAGAGGAGTACGCGCGTAGTGGCGGCTCCGTGTCGCCGCGGTACTGCTCCGCCGCGTCCACGCCGCACGCCGCGCCCGCGACCTACCCACACCCGCAGCACTACCCCGCGCCGCCCACCTCACTATTCAACACTACCTCGCTGTCTCTTGGCCCGTATCATCCAGCCAACATGAATAGAAATTTGTCATCTGACCATCACTATAACGCGTATAATACGGAAGATAGCGGACATTACAGTGAAAGAAATGTGAATTCTAAGAGCATGGCCGACTGTCCGGCAAATACTCATGCAAAATGCACTGGCAGCGATATGAAAGGGCCACAGAGTAAAGAGAGTAAACAGAGAAGCGCTTTTGCTGTAGTGAGACAGAGTCCGCCAAGGGTTGCCAATGTTCAACACCATCCGAATTGGCAACATCTCGCCGTTCAGTGTTag
Protein Sequence
MNPKGVVSTPLISRTVGTAIFGTALPVPRAIFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDGAPEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPATYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNRNLSSDHHYNAYNTEDSGHYSERNVNSKSMADCPANTHAKCTGSDMKGPQSKESKQRSAFAVVRQSPPRVANVQHHPNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-