Basic Information

Gene Symbol
-
Assembly
GCA_958496185.1
Location
OY292310.1:6597336-6611300[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-13 1.3e-09 38.7 0.0 3 89 221 293 219 293 0.91
2 2 2.7 7.6e+03 -2.2 0.0 28 40 623 635 608 637 0.73

Sequence Information

Coding Sequence
ATGCGATATGATGAGGTACTAGCGATAAACGACAAGGTGGTAGTCCGGGCGGAGGACCTGCTCAGCTGGGTGTGCGCGGGCGACAGTTGGCGGTGGGGGCTGCGTGCTGTGTGGAAGGGCTCGTGTGCACCGCCAGCGGAGCCCCGCCACACGGCGCCGCTGCACCACACCAAGCTGGACTTCAGCGACATCGAGAGGGAGAAGAGTACTATAGCAGTGGACGCGGAGTGTCCCGGTGTGGTGGTCTTCTCGTACCCTCGATACTGCCGCTACAGGGCGCTGCTGTCCCGCCTCGAAGGCATCCAGGGGGACTGGCTGAGGGACTCTCTAGTGGCTGCGCTTGGAGGTTACGCGGCACCCACCAAAAACACCAGGATACTGTACTGCAAGGACACCTTCGAGTACCCGGAACTGGAAGGACACGAGTTTGTGTGCAACCACCTAGCGCCTAGGTTGAAGGGAAGGCCGCGTGGCCGACGTCGACGTCCCCCGCGCTCACGTAGCCACTCCCCCTCGTCGCCATCGCCGTCGCGCTCCAGCGACAGCGACCACGACCGCCCTCCTCCTCAGCCTAGGATCCAAACCCCCCGGCGGCTCACACTCCGCAACGGTGATAAACACAGCGACGAGGATGAGGTGAAGGAGGCCACCGCCGAAGACAAAGCATTCCTGATGACGCTCAAGAAGTTCTACAAGGACAGAAACGAGTCGTTCAGCGCTGCGTACACGCTCAAGGACTTGTCGCTTCGGGCGCTGTACGCGTGGGTGCGAGCGCGCGGCGGCTACGAGGCCGTATGCGGCCGCAAGCTGTGGCGGCACGCAGCCGCGCAgcccgcccgcgcccgccgccacTACGAGCGATTTCTGCTGCCCTTCGAACACCACGAACGACGGAATGGCCACAAAGTGAACGGGCGAGTGGACGAGCCCCACACCATAGCCACCATAGAAGTGGCCGACTCCCCCCTCAGGGATGTGGATAAACAGCCCAACCTCCCTGAAAAGAGACTCCGCACCCCCTCACCGAAACACGAACCTGTCAATAATGAAACATGCGAAGTCAAGGAGGAATACATAATATCCAAGCCTGCTGAAGAACTCAACAGGGAATTCTTGGAATCACTACCCAAAGAAGAGAAATTTATCAATGTAAAACCAGCGGAGAAGTTGTTTGATCAGAAAGTGGATGTGAAGGACCCCGATGCGGATGCCAAGCCGATTCTAGTGGATTCCAGCAATGTGATAGACGACAGTGGGTGTAAGGTGAAGGATGCTTCGGTGTACGGGAACGAGCTGCCGCAGAAAGTGAATTcgaGCGGCAGCGAGGCGGTTGCGGCAGGCGCCGACGGCAGCTCGCTGTCGAGCCTGTCCGCGCTCGGAGACAAGTATGTGAACGGACACCACGCTCCGCCCGCGCACCAGAAGAGCAAACCGGTGGGTCGCAGCTCGCTGCGGGCCGTACGCGTGAAGCCAGCGCGGCCCAACCACGCGCCCGCAAACACACCGCCCATTCCCCCCCTCCGGCCGGAGTCGGCGTCGTCATCGCCTCAGCCGGTGGTAACCACCTCCACAGTCGGGCCGCCCATCACCAACTTCGGGATCCATCATCCGCCAGCGCCTATTAGCGATGATGAAATTGTGGAGGTCCCATACAAGCCGAAGACACCAGAGATAATAGATTTAGACGAGTACCCGGAGAGTCCGCAAGCCGTCAAGAAGAAGAAACTGGATATCCTCAAAGAGAGGGGTCTGGAGGTAACCGCCATACCGACGCCCGCCTGGCCCGGCCCCGTGCCCCTGACCACCATCAACCCCATCCTGAACACGGCCCCCATGACGCTAAACCCCGCTGTTCAGCACCAGATCATGACCCAAGTCCAGCTGTTCCAAATGTACAACATCGTCCCGCCAAATTACGCCAACGGCGTTCGACCGCCTAAAATCACGCAGGGCACCTCGATTTTCGGATCGTCGGGCCCCGAGAAAACCGTGTACGGCAATCCCAAAGATCCCTTCATGCCTCCGCCCCACATCCTACACGGTGCCCCGGTAAAACCCCAAAAGAATGTAGCCTCCTCAACACCGCAAACCCCGCCTCAAGATATCTTAGACTTAACGTGCAAAAACCCGTCCCTACCCCCGCAGAAACCAGCGGTCGAGATAGTCAGAGTTCCCCCGACACCATCCCCCTCGAAGGTGACGAGTACCCCGCAAAATTTAGCGAAAAATTACACGTTAATCGACGGGAAAGCGGTCGTAGGATCCAATTTAGAAATCACTTTAGTCAATCCAAAATCTCAACACAATTCAATGAAGAATCGAACGCCGCAGAAGCGGTCCTCCAACGGCAAATTCATGTCCACAAAGACCGTTACGCCCCCTAAAGATTACCCCAAAGCGTACACGTGTCCTTCCCCCTCCGGGGCACACAAGAAATCTCCCATAGTGGTCCCCAACTACCAAGTGAATCCCCGGGACGACCCTTCCCCAACGAGTTCGACCGGATCAAGGGACAGTCAGACGCCGCAGAACtttcaaaatgtaattaaaaatcataatctAGCGCAGATTTTGGAAATGCAAAAGACGGTGCCCACCGTCGGGCCTTTTATGGACCCGGTGTACATGAGTGCACTGTACAACAGCCTGGGCCAAATGGACCAGAGACAATTAGCCGCGTATAGAGACATGATGGCCAGCCAGTTTAGGGGTTACTCTGGCCTCCTAAACATGGGTGCGGTGACGAATACACCTACAACGAAAAATTAA
Protein Sequence
MRYDEVLAINDKVVVRAEDLLSWVCAGDSWRWGLRAVWKGSCAPPAEPRHTAPLHHTKLDFSDIEREKSTIAVDAECPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRSHSPSSPSPSRSSDSDHDRPPPQPRIQTPRRLTLRNGDKHSDEDEVKEATAEDKAFLMTLKKFYKDRNESFSAAYTLKDLSLRALYAWVRARGGYEAVCGRKLWRHAAAQPARARRHYERFLLPFEHHERRNGHKVNGRVDEPHTIATIEVADSPLRDVDKQPNLPEKRLRTPSPKHEPVNNETCEVKEEYIISKPAEELNREFLESLPKEEKFINVKPAEKLFDQKVDVKDPDADAKPILVDSSNVIDDSGCKVKDASVYGNELPQKVNSSGSEAVAAGADGSSLSSLSALGDKYVNGHHAPPAHQKSKPVGRSSLRAVRVKPARPNHAPANTPPIPPLRPESASSSPQPVVTTSTVGPPITNFGIHHPPAPISDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAIPTPAWPGPVPLTTINPILNTAPMTLNPAVQHQIMTQVQLFQMYNIVPPNYANGVRPPKITQGTSIFGSSGPEKTVYGNPKDPFMPPPHILHGAPVKPQKNVASSTPQTPPQDILDLTCKNPSLPPQKPAVEIVRVPPTPSPSKVTSTPQNLAKNYTLIDGKAVVGSNLEITLVNPKSQHNSMKNRTPQKRSSNGKFMSTKTVTPPKDYPKAYTCPSPSGAHKKSPIVVPNYQVNPRDDPSPTSSTGSRDSQTPQNFQNVIKNHNLAQILEMQKTVPTVGPFMDPVYMSALYNSLGQMDQRQLAAYRDMMASQFRGYSGLLNMGAVTNTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00007794;
90% Identity
-
80% Identity
-