Basic Information

Gene Symbol
Xbp1
Assembly
GCA_958496185.1
Location
OY292286.1:3590363-3591799[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.6 9.5e+03 -2.8 0.0 17 25 31 39 29 40 0.70
2 3 6.3e-17 6.2e-14 52.2 14.3 2 63 44 105 44 107 0.94
3 3 7.7e-05 0.077 13.5 0.6 32 55 88 111 87 116 0.91

Sequence Information

Coding Sequence
ATGAGTGCACCGATCATTATCACTGTCCCAAATAACTACCTGGCGGTGGAGGAGATGGACTCCGATGTTGTAGTCGACGTCACCTCTGCTCCACCGTCTAGGAAGCGACGGCTGGATCATCTAACATGGGAGGAGAAGATGCAAAGAAAgAAATTAAAGAATCGCGTGGCAGCACAAACATCGCGCGACAGGAAAAAGGCCAAAATGGACGAGATGGAACATCGCCTACAGGAGTTCATGGAGGCGAACAAACGGTTGACGAGCGAGGTGGAGAGTTTGAAGGCGTTGAACGAGCGCTTGCTCAGCGAGAACGCTGCGTTACGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGGGCCCCAGGACCGGCAGAGTCTCCTCAGCAGAAGGACGGGCCCCCGCCGGCGATCCGCGCGGCGCGCATGCTGCTGACGATGTTGCTCCTCTCGCAGACATCCTCGCGCACCTCGACTCTGAAGAGTACCTCGACAGCCTCCATCAACTTGCAGACTCCCTATTACAAGAAATTGGCGCAAGTGTTGCAGGAGCGGCTGAACATGTCTCAGACAGGAAAACTGGAGAGTGCCCTGAAGGAGCTCAAGTGGTGGGGACCGCAGCAGAACACCTGGAATCCGGTGAAGGTGCAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAVEEMDSDVVVDVTSAPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRLQEFMEANKRLTSEVESLKALNERLLSENAALRSEAAARTVAGAPGPAESPQQKDGPPPAIRAARMLLTMLLLSQTSSRTSTLKSTSTASINLQTPYYKKLAQVLQERLNMSQTGKLESALKELKWWGPQQNTWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00007743;
80% Identity
-