Gnym022079.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- pnr
- Assembly
- GCA_963978555.1
- Location
- OZ021711.1:14577181-14580239[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 7.9e+03 -2.3 0.1 15 24 345 354 345 354 0.87 2 2 2.1e-16 1.1e-12 48.5 3.6 1 34 371 403 371 405 0.98
Sequence Information
- Coding Sequence
- ATGGTGGGTATTTGCATTGTTGAAAATCCTGTTTTCTTACAGGAAAAACAGCAACAATCGGAAAATCTTCTAGAAAATCTGACAACCTCAATACACACATTACCTCCCGATTTTAAAATCGAACGACCACAGCTAGCTTCAAATGAAAACTTCACGTTGCCCACCAAAGCACCAACAGAGCTACTGGTAAAAACTATGGAAATAAAAGCAGAACCTGTATATATGGATGAGGGAGAAGTATCACAAGCGTCCCTTGAACCCCCGAAGTTCGATGGCGAAAGTGAAAATATTGCTCCCAAAGCTGAAGCATCGGACAATCTTATGCCCCCTCAAGATGTGTCTATGGATTTGTCCAAGGATAATACAGAAGAATCTGTGCGCGAACTTTTAATAAAGgTGAAACCTCCCTGTGCCCTACACTACACACCCGAAAATAGTATTGCCGATTTATCTAATATTCCTAGAATGATTACTCAAGATTTCGGTCGTTTTGCAAGCGACGACAAAAACGATATCACCTGCCCTACCGAACCGACCGATCTATcgaataaaaaaactgaaaaattaacGTGTGTGCCTGAAATCGGTTACATCAAAGAAGAAATCGATGCTGTGTCAGTGTCGAGCAACAGCTCTGATCCAGAACGATTAGAAGTGGACATGTCTCAGGTAACTGAAGAGCAAAGCGACTCCACAAACAGCGAAACGTCCCCCAAATCCGAACCAACGTTAAACCAAAATGAAGTTGACCCTGCACTCTGGCAGACACTTTCTCGGAATGGTTATAATCCCTCTTTAAGCGGAGAAGCTAGCCAGTTACTAAGAAAGCTTATAACCTGTCGAAAATTGGGCATGACTATAACTCCCGCTCAGCCACGAGTTTTAAATTACACATTATTCGACGAGAGACAAGCATCTGCAGATAGTATTAATCAAAAAAATTCTTGTAGAAGAAAACAAAGCTATCCTTCCAAAGCAACTGTTCCACCCGAAGGTGCTCCAATGGAACAAGATAATGAAGATTATGAGTATGGGCCAGATAATTCTCTTATCTTATGCAATTTGGGGAAGGGAAAGAAAATGGAATTGAAACGAATGGTAGCTATATCATGTACAAACTGTGGTACTCAAACAACAACGATTTGGAGACGGAACCTTAGAGGAGAGATGGTTTGCAACGCTTGTGGactttatttcaaattacaCGGAATAGATAGGCCTGTCACAATGCGAAGAGATACAATTCACACTAGACGTAGAAGGCCAAAGGCGGCTGAAGCAGAAAAACCGCATTCTAAAGAATATAGTCCATTCAGCAATCCTCCAGTTCATACGTACaaaggaaaaattattaaaggatCTTCCAAAGACAAAAGCAATACCGATACATCCGACACAGAGGACATGCTGAGCGCCTTAAGGCGCCAACTTCAACCCCACTTGGTGATGGCCTTACAAGGACATCGAAATAGTTTAAATTCCAACCCAGATGGTAGTCAGAGAGTTCCTTCACACGCACACTTACAGGGTCCACCTTTACCAAATTTCTTGCCGTTAGAGAAATCCAGTGGCGTTCCCAAACGGGAAGCTGAATCCGATGAGGACAGCATAGCAGATCTACCATTAAACCTTGTTTCGACACATATGACTGAGGGTGAATtaatttaa
- Protein Sequence
- MVGICIVENPVFLQEKQQQSENLLENLTTSIHTLPPDFKIERPQLASNENFTLPTKAPTELLVKTMEIKAEPVYMDEGEVSQASLEPPKFDGESENIAPKAEASDNLMPPQDVSMDLSKDNTEESVRELLIKVKPPCALHYTPENSIADLSNIPRMITQDFGRFASDDKNDITCPTEPTDLSNKKTEKLTCVPEIGYIKEEIDAVSVSSNSSDPERLEVDMSQVTEEQSDSTNSETSPKSEPTLNQNEVDPALWQTLSRNGYNPSLSGEASQLLRKLITCRKLGMTITPAQPRVLNYTLFDERQASADSINQKNSCRRKQSYPSKATVPPEGAPMEQDNEDYEYGPDNSLILCNLGKGKKMELKRMVAISCTNCGTQTTTIWRRNLRGEMVCNACGLYFKLHGIDRPVTMRRDTIHTRRRRPKAAEAEKPHSKEYSPFSNPPVHTYKGKIIKGSSKDKSNTDTSDTEDMLSALRRQLQPHLVMALQGHRNSLNSNPDGSQRVPSHAHLQGPPLPNFLPLEKSSGVPKREAESDEDSIADLPLNLVSTHMTEGELI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106855;
- 90% Identity
- -
- 80% Identity
- -