Basic Information

Insect: Galerucella nymphaeae
Gene Symbol: zfy1
Assembly: GCA_963978555.1
Location: OZ021714.1:9516770-9524133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0095 1.5 10.6 1.2 3 23 67 87 66 87 0.97

2 25 0.031 4.7 9.0 3.8 1 23 93 115 93 115 0.96

3 25 0.0068 1 11.1 1.4 1 23 118 140 118 140 0.93

4 25 0.00012 0.018 16.6 1.3 1 23 146 169 146 170 0.97

5 25 0.0016 0.24 13.1 2.0 1 23 181 204 181 204 0.95

6 25 1e-05 0.0015 20.0 0.7 3 23 215 235 213 235 0.97

7 25 2.6e-05 0.004 18.7 1.5 1 23 241 263 241 263 0.98

8 25 0.00013 0.019 16.5 0.5 1 23 269 291 269 291 0.98

9 25 7e-07 0.00011 23.6 0.3 1 22 297 318 297 318 0.96

10 25 0.063 9.8 8.0 3.8 1 23 393 415 393 415 0.97

11 25 0.018 2.8 9.7 0.8 1 19 418 436 418 439 0.91

12 25 0.00029 0.045 15.4 0.1 1 23 444 467 444 467 0.95

13 25 0.083 13 7.6 3.4 1 23 479 502 479 502 0.96

14 25 0.00041 0.064 14.9 2.1 3 23 513 533 511 533 0.97

15 25 1.4e-06 0.00022 22.6 0.4 1 23 539 561 539 561 0.98

16 25 0.29 45 5.9 0.1 1 12 567 578 567 582 0.91

17 25 0.016 2.5 9.9 0.6 2 23 668 689 667 689 0.91

18 25 0.017 2.7 9.8 4.2 1 23 695 717 695 717 0.98

19 25 0.0087 1.3 10.7 4.1 1 23 720 742 720 742 0.96

20 25 0.00034 0.052 15.2 0.4 2 23 749 770 748 770 0.96

21 25 0.00022 0.034 15.7 1.4 1 23 779 802 779 802 0.93

22 25 3.4e-05 0.0052 18.3 0.3 2 23 812 833 811 833 0.96

23 25 0.00089 0.14 13.8 2.5 1 23 839 861 839 861 0.96

24 25 1.2e-05 0.0019 19.7 0.9 1 23 867 889 867 889 0.99

25 25 1e-05 0.0016 19.9 0.1 1 22 895 916 895 916 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0095	1.5	10.6	1.2	3	23	67	87	66	87	0.97
2	25	0.031	4.7	9.0	3.8	1	23	93	115	93	115	0.96
3	25	0.0068	1	11.1	1.4	1	23	118	140	118	140	0.93
4	25	0.00012	0.018	16.6	1.3	1	23	146	169	146	170	0.97
5	25	0.0016	0.24	13.1	2.0	1	23	181	204	181	204	0.95
6	25	1e-05	0.0015	20.0	0.7	3	23	215	235	213	235	0.97
7	25	2.6e-05	0.004	18.7	1.5	1	23	241	263	241	263	0.98
8	25	0.00013	0.019	16.5	0.5	1	23	269	291	269	291	0.98
9	25	7e-07	0.00011	23.6	0.3	1	22	297	318	297	318	0.96
10	25	0.063	9.8	8.0	3.8	1	23	393	415	393	415	0.97
11	25	0.018	2.8	9.7	0.8	1	19	418	436	418	439	0.91
12	25	0.00029	0.045	15.4	0.1	1	23	444	467	444	467	0.95
13	25	0.083	13	7.6	3.4	1	23	479	502	479	502	0.96
14	25	0.00041	0.064	14.9	2.1	3	23	513	533	511	533	0.97
15	25	1.4e-06	0.00022	22.6	0.4	1	23	539	561	539	561	0.98
16	25	0.29	45	5.9	0.1	1	12	567	578	567	582	0.91
17	25	0.016	2.5	9.9	0.6	2	23	668	689	667	689	0.91
18	25	0.017	2.7	9.8	4.2	1	23	695	717	695	717	0.98
19	25	0.0087	1.3	10.7	4.1	1	23	720	742	720	742	0.96
20	25	0.00034	0.052	15.2	0.4	2	23	749	770	748	770	0.96
21	25	0.00022	0.034	15.7	1.4	1	23	779	802	779	802	0.93
22	25	3.4e-05	0.0052	18.3	0.3	2	23	812	833	811	833	0.96
23	25	0.00089	0.14	13.8	2.5	1	23	839	861	839	861	0.96
24	25	1.2e-05	0.0019	19.7	0.9	1	23	867	889	867	889	0.99
25	25	1e-05	0.0016	19.9	0.1	1	22	895	916	895	916	0.97

Sequence Information

Coding Sequence: ATGGTTAAGTTAGTGAACATATGTACAGAAAATATGAACTCTTTGATGAAACAGCTACATATATACTCAGCTTCTgTACAttttaataataacaagaaaaaatcgaagaaaaaagCACCGATTACAGTACCAGAACCGGAAATagacgaaaaaatgatgaaactAATCGAGATATTGAAACTTGACAAACCACTTTTATGTCCAACATGCCAAAAAGCATTCACCAGCCACTTAGAATTAGCGTTACATTCAAAAAATCACAGCGAAGCCAAAATACACAGTTGCCATCTATGCGGATTTTCCGTAGCTACAAAGTTTCGAATAAAAAGACACATGAACGGTCACGCAGGTTACAAATGTTTAATTTGTAGTAAAGTTTTCCGGAAATCACGAGCGGCGTTAAAACATTCCTACAGCCATACCGGCGAAAAAATGTACCCATGCGAAATTTGCGGTAAACACTTGGCAAATTCAAAAAGTTTAGACACTCATTTAAACACAATTCACCACGAAATTATAACCGGGAAACCTCTAGTTAAATTCGATTGTCCTCTATGTAAAAAACACTACGAATCAGAAACGGGTTTAAGAAGACATTATTCCAGCATGCACCGCGAAATGGGAGTTGACTTAACGGTAATTTGTGAGGTTTGCGGTAAAAGAATATCCAATAGAACCAGACTTACGCGACACATGCGTACGCATACTGGGCAAAAACCGTTTCCTTGCTCAATCTGCGTTCGGAATTTCGCTACTAAATGTTTGTTAACGTCGCACATGAGAGTGCACACTGGTGAGAAACCGTACGTTTGTTCTTTTTGCGGAAAAAGGTTCGGTCAGTCTGCTCCTTATAGATACCATATTAAAATTCATACTGGGGATCGTAGGTACAATTGTACTATTTGTGGTAAAGCCTTTATTTCTAATAGTAATCTTAAAATTCATACTAAAACgtaCAAAAAGACCAGAAGAAAATACACAAAAACGAAAAATAGCTTATCAAATCCCAAACTAAAGCAATCATCCAAAAGATCAAAAGTAaccaaagaaaaagaaaacaaaatccAAAACTTATTCGACAACGACGAACCGAGAACGTGCTCTTTGTGCGAAGCAAAGTTCGAAAACCTCTTGGACTTCGCTTTCCACTCAAAAACCCACGAAAGCAATGGCTTCTATTCTTGCCACATTTGCAACAAAAAAGTCTTGAAAAAGAAATCTTTTGAAAAGCACGTGCTGTCTCACAAAAGATTCAAATGCGAAATATGCAACAGAATCTACAAAAGGGAATCGACAGCATTGAATCATTCTCATAGGTGGGAGAAATATTTCGAATGTAAAATATGCGGTAAGCAATTGAACTCCGAATGGGGATTAACGACACACATGGCCAACATTCACATGGAAATCGTCACAGACGGTCCTTTATTCAAACACCAGTGCAAAATTTGCCTCAAATCTTATTTGTACAAAAGCGGATTGAAAATGCATTATTCTAGTCAACACAGAGAATTAGGGGTGGATTATACAGTTATTTGTGACGTTTGCGGTAAAAGTCTATCGTGCAAGAGCAAACTCAGGCAACATTTACGTACCCACACCGGTGATAAACCCTTCCCTTGTCCtatttgttctagaaaatttATAACCAAAGATCTTATGACGTCGCATATGAGAGTCCATACTGGAGAGAAACCGTATATTTGCATGTATTGCGGAAAGGAGTTTGCTCAAGGTGCTCCTTACAGgaaaaataaaaaaccgaataaaaaaattgaccatCTTCCcgtgaaaaaaatagaaaaaccgctatacaagaaaataaaaatcgaaTTTGAAAACGACAAAGATGACGGTTTCACAGAAGATAAACCGAAATTAAAACAAGAAAAAGTACGTAAAAAGAGAGAAGAAAAACCTTCACTAAGAGAAATACAACGATTATTACAAAAAGACAGCAATCCCAACATAATAAACTTAGACGAACTCCCAAATCCTTTAATATGCCCAGTTTGCGATGAAACTTTCCATACAAACAGGGAATACGCCTACCATTCAGTAAAACACAACAACGACAATCACTTCACCTGTcatttttgtgattttaaaACCGAACAAAAGAAACAAATTAAAGCACATATGCTGCAACATAGtgtatttaaatgtaaaatatgcgaaaaaatatttaaaaaacgacATTCGGCGTACAAACACGGAGAAAGACATATggaaaacaacaaagtacaatGCGAGATGTGTGGGAAAAGTTTACAAAGTCAATCGTTGAAAACTCATATGAAAATTGTACATACCGATGAAATGACGCATCAGAAACATTATTGTCCGATATGTAATAAGGCTTACAGgtacACCTCTAGCGTGAGAAAACACATTTCAGCGAATCATAGAGAGCTCGGTATAGACGTTTCGGTAGTTTGTGACATATGCGGCAAAAGAATATCAAGTAAGAGTAAGCTGATGAAGCACTTGACCATCCATACGGGAGATAAACCACATAGTTGTGAGGTCTGTCATAAAAAGTTTAGAGCAATAGATACTCTACGTTCCCATATGGTAGTGCATACGGGAGAAAAACCGTATAAGTGTACGTATTGCGGTAAAGGTTTCGGACAAAACGCTCCCTATCGGTATCACATCAAAACACATACCGGCGAGAAAAACTATTCTTGTACTATTTGTGGAAAAGGTTTTATCTCCAAGGCTAATTGGAGGTTACATATCAAAACTTGCGATATACTTGCTACCGGAAAAGTGAAGTTTTAA
Protein Sequence: MVKLVNICTENMNSLMKQLHIYSASVHFNNNKKKSKKKAPITVPEPEIDEKMMKLIEILKLDKPLLCPTCQKAFTSHLELALHSKNHSEAKIHSCHLCGFSVATKFRIKRHMNGHAGYKCLICSKVFRKSRAALKHSYSHTGEKMYPCEICGKHLANSKSLDTHLNTIHHEIITGKPLVKFDCPLCKKHYESETGLRRHYSSMHREMGVDLTVICEVCGKRISNRTRLTRHMRTHTGQKPFPCSICVRNFATKCLLTSHMRVHTGEKPYVCSFCGKRFGQSAPYRYHIKIHTGDRRYNCTICGKAFISNSNLKIHTKTYKKTRRKYTKTKNSLSNPKLKQSSKRSKVTKEKENKIQNLFDNDEPRTCSLCEAKFENLLDFAFHSKTHESNGFYSCHICNKKVLKKKSFEKHVLSHKRFKCEICNRIYKRESTALNHSHRWEKYFECKICGKQLNSEWGLTTHMANIHMEIVTDGPLFKHQCKICLKSYLYKSGLKMHYSSQHRELGVDYTVICDVCGKSLSCKSKLRQHLRTHTGDKPFPCPICSRKFITKDLMTSHMRVHTGEKPYICMYCGKEFAQGAPYRKNKKPNKKIDHLPVKKIEKPLYKKIKIEFENDKDDGFTEDKPKLKQEKVRKKREEKPSLREIQRLLQKDSNPNIINLDELPNPLICPVCDETFHTNREYAYHSVKHNNDNHFTCHFCDFKTEQKKQIKAHMLQHSVFKCKICEKIFKKRHSAYKHGERHMENNKVQCEMCGKSLQSQSLKTHMKIVHTDEMTHQKHYCPICNKAYRYTSSVRKHISANHRELGIDVSVVCDICGKRISSKSKLMKHLTIHTGDKPHSCEVCHKKFRAIDTLRSHMVVHTGEKPYKCTYCGKGFGQNAPYRYHIKTHTGEKNYSCTICGKGFISKANWRLHIKTCDILATGKVKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -