Gnym035226.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_963978555.1
- Location
- OZ021718.1:9410024-9413930[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9 8.1e+03 -1.9 0.4 19 36 391 408 389 415 0.73 2 2 4.6e-10 7.6e-07 30.2 6.6 4 61 437 494 434 497 0.92
Sequence Information
- Coding Sequence
- ATGTCTTATTATTTTGCTATGtccCTATCAGCATGGCCATTGCAAACAAAACCACCCACTTATGTGGATCCTTCCGAGAAATTATTGCCCATAAATCGGCAAGAGATAAATATATGCGGAACGATTACTACCGGCCCCCTTGTGGACAAAGCAGAATTGTTGGAAAACGAAATGGATTCGTACGTGTGTGTAAATCCGTACGAAGTCAATCCCATATCAAAAAATTCAGATTTGCCCTCTGTAACGCTACCAACAGATATAACCCCCAAGGTCGAATCCAGTGCTACTCCACCAAACCAGTGCGCAATAAGCAGTGGTATGTTTTACGAAACTCCAAAGAGAGTCAAGTTGGAAATGGAGGAATTTCGCGATTTGTCCCCGTTTGTCTCACAAAGACAAATCATTTCAAATTCCGTATATGAACTGACCACACCGATTTTCGataaagCTGCTTTTGATTTCGATTCAAGCAATTATCAGAAAAACGTTCAGGCAGATCTACACGTGAAGCTGAAATACGATGCGTTCTACCACGATAATAATGACGTTTGTAACAACCATCATTTCCCATATTATTCGGATACCACGCATCGAAACATCATTACGtctaataacaataataatattaatattcaaaaatacgATTCCGGTGTATATTCACCAGAATCCGAAAATGGTACATACATCGACAAAAAATCATCTAGTGCGACCATGTTCGATATAGATATGAACGATAGTGTTAGTGTTAATTCTAATAGAACTTCTTATCCGTCCACATCGACGGATTCTAATAATCTAATTACCGCGAATGATGCTGAAGCATCCTTGAATTTCGGCGCATCTTCCAAGCCCAAACTATTCTTGGATATCGGACTTAAACAACCGACAAACGTTTTTGACATCAACACGCCTAGTATTATTGCCGAAGTTGTCAGTTTGGAATCCACTGGCTTCAATATCTTGGATCTAGTTAACGAAGACCAGATTGATTTGGTGAAGAATGATATCTTTACCTCAAACGCCGCAGCTTCTTTAAAGGCGAATTGTGGCGATAATCAATCAAATTTCTCCTCGACGTCGGGTGGGTCGGTCGAAAAGAAGTCGACCAATCGGCGGCAGCTAAGtgacgatgatgacgatgaaGATTACGTTCCGCCGACTAATAAAAAAGTTAGGAAACGTAAGAGATCGTATTATTCAGATATAGAAAGCGACGAAGAGGATGTTCCTAAAAGAAAACCAAGAGGAAGGCCGCCGAAAAGGGCGGAATCCGTATCGTCGGAGAGTTCGAAGGAAGCCGACGTTTCaaaATATCGAGAATTGAGAGATAAGAATAACGAAGCGTCGAGGAAATCTAGGCTGAAGAGGAAAATTAAAGAAACCGAATTGGAAATTGAATCGAACGAACTTCACAGCCGGAATATTAAATTGAAAGCCCAAGTTGAAGAACTAGAAAAAATGGTGACTAACTTTAGAGATAATCTTTTTAAGATAATGATTAACAAGTAG
- Protein Sequence
- MSYYFAMSLSAWPLQTKPPTYVDPSEKLLPINRQEINICGTITTGPLVDKAELLENEMDSYVCVNPYEVNPISKNSDLPSVTLPTDITPKVESSATPPNQCAISSGMFYETPKRVKLEMEEFRDLSPFVSQRQIISNSVYELTTPIFDKAAFDFDSSNYQKNVQADLHVKLKYDAFYHDNNDVCNNHHFPYYSDTTHRNIITSNNNNNINIQKYDSGVYSPESENGTYIDKKSSSATMFDIDMNDSVSVNSNRTSYPSTSTDSNNLITANDAEASLNFGASSKPKLFLDIGLKQPTNVFDINTPSIIAEVVSLESTGFNILDLVNEDQIDLVKNDIFTSNAAASLKANCGDNQSNFSSTSGGSVEKKSTNRRQLSDDDDDEDYVPPTNKKVRKRKRSYYSDIESDEEDVPKRKPRGRPPKRAESVSSESSKEADVSKYRELRDKNNEASRKSRLKRKIKETELEIESNELHSRNIKLKAQVEELEKMVTNFRDNLFKIMINK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910274;
- 90% Identity
- -
- 80% Identity
- -