Gnig008005.1
Basic Information
- Insect
- Galeopsomyia nigrocyanea
- Gene Symbol
- pnr
- Assembly
- GCA_035047105.1
- Location
- JAWWMK010000040.1:12332743-12346003[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 1.4e+04 -3.1 0.3 21 26 10 15 9 18 0.79 2 3 7.9e-18 3.6e-14 53.2 2.6 1 34 123 155 123 157 0.96 3 3 6.6e-19 3e-15 56.7 6.2 1 35 182 215 182 216 0.98
Sequence Information
- Coding Sequence
- ATGCCCGGACATTCTGCCAAAGTGGTCAGCTTGTGCGATGAATGCACCGAAAATCGGTTGAAGCATTCTGCGGAGAAGTCGGCATCGTGGCAACACAGCGTAGATACTTACGCACACCATGCGTTGGCTAGTCATACAGGCAGTTCGACGGGAGGCATGGGACCCCACACGGGTCACACACACCCGCATGCCGGGCACCCGCATACTGCCCATCCACACACAAGtctcgctgccgccgctgcgtCGCCCTTCTACGCCCAGAACGCTGCGATGATGTCGTCCTGGCGTGTCTACGACAGTGCTGGCTTTCAACGAGCTTCTCCATACGACACAGCAATGGATTTCCAGTTCAGCGAAGGCCGAGAATGCGTGAATTGCGGAGCCATTTCGACGCCGCTGTGGCGACGGGACGGCACGGGCCACTATCTGTGCAATGCCTGCGGACTCTATCACAAAATTAACGGGATGAATCGTCCTCTGATCAAGCCAACAAAGCGCCTCATCTCCGAATTCCAGACGGCGACGAGGCGGCTGGGACTCTGCTGCACGAATTGCGGCACGCGCACCACCACCCTCTGGAGGCGCAACAACGAGGGCGAGCCCGTGTGCAACGCCTGCGGCCTCTACTTCAAGCTGCACGGCGTCAATCGGCCGCTCGCCATGCGCAAAGACGGCATACAGACTCGCAAGCGCAAGCCCAAGAAGACACCCGAATCCAGCGCCAGGCAGTCCTCCCAGGATCACGACAACGGCACTTCCACCACCTCATCGCCCGCCAATGAACTGAAGAGCAGCCATCATCAGCCGCACGGGCAGCATCCGCAGCAGCACCAGCTGGACGTGAAGCCGTCGTCGACGAGctcggcgtcgtcgtcggtggcGGATCGGCCGGTCTACTTGGGACACACGTCGCTGCTGCCGTCGAGCgcggctgcggctgcggcggcggcggcggcggcgagcggCAGTGCGTCGGGCGTCGGTATACCCACGGTCAAGACGGAGCCACGCAGTTGCGACGGGGGCGTGATAAGCCAGCCATACTCGGCCTACTACCAGCATCCCCATCAGCTGGCCGTGCCGGCTAGCGAGCACCAGCAGGCCAACTACTACGCGGCCCAGGAGGCGCCCTATCATCATCAGCACCACGTCACCGCGGCCGCCAAGCTTCTCGCCTCCTCGTGA
- Protein Sequence
- MPGHSAKVVSLCDECTENRLKHSAEKSASWQHSVDTYAHHALASHTGSSTGGMGPHTGHTHPHAGHPHTAHPHTSLAAAAASPFYAQNAAMMSSWRVYDSAGFQRASPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPESSARQSSQDHDNGTSTTSSPANELKSSHHQPHGQHPQQHQLDVKPSSTSSASSSVADRPVYLGHTSLLPSSAAAAAAAAAAASGSASGVGIPTVKTEPRSCDGGVISQPYSAYYQHPHQLAVPASEHQQANYYAAQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714056;
- 90% Identity
- -
- 80% Identity
- -