Gnig008006.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Galeopsomyia nigrocyanea
Gene Symbol
gata5-b
Assembly
GCA_035047105.1
Location
JAWWMK010000040.1:12356927-12376620[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.1e-17 2.8e-13 50.4 3.2 1 34 625 657 625 659 0.97
2 2 2.9e-19 1.3e-15 57.8 3.7 1 35 679 712 679 713 0.98

Sequence Information

Coding Sequence
ATGTGGAATAATATAGAGGCGGCGAGCCATCGAGATTCCCCTTCGgtcgaagcagcagcagcagagtcaAACGGTTTGAAAGTCGAGCGCGCGGTGAGTCGACGGCTGGAGGAGGAAGGCGGCGAGGGCGGAGTTAGCGGGTCGCCAGGCGTGGCCGAGGCGGGACATCCGGACGGGGCGAAAAATGGCGTCGACTTCGGCGTCGTCGAGCAGcggcaccagcagcagcatcagcagtgGCTCGCCACCGGTTGCTTCCAACACTCGAAGCCAGACGCGACCGCTTATCACGGACTGCACGCCAGCTTCGCCCTCAGGCAACTCGCTTACTtggagcagcagcaacacacTCTAGGCAATCAACGTTTTCAGATCGAGACGAGCGCTTACGGCAGTTCAATAATCGAGCGCAGCACTCATCATCAGCAGGGTCAAATTGTCGATCCGGCGGAGTTTCAACAGCAGCCCGCGCGTCACATTAGCCGAGAGAGCAGCTCGTCTCAGCATCAGCcccactaccaccaccaccaccaccaccagcgcGCGGCAACTGCGGCGGCGAGTGCGGCGGCAGAAACGGGGGCGGGAGAGGTCCCTGCGGTTCCCGAAGGAGGGGATAGCCAGCCGCCGAGCAGCCAGGCCTCAGTCCCGACGGAAGGGAAGAGCGCCGTCAGTCACATGCCTCTCGTCGCGATGCACCGATACTCCGCCGCAACCGCCGAGGCGCTCTCGCCcgagcaccaccaccaccaccatcaccatcaccaccacAACCCGCACCACGGCCTCGGCCGCCACGACGACCCGCAGCAGCAACACGACGAGCGCACCTCCGCCATCAACCTCAACGTCTACCTGCCGAGCCTCGGCAGTCAGCCGGGCAGCAACTCCAGCAGCGGCAGTCACCAccaccaacagcagcagcagcagcacctcgACGACGTGCTCCAACACGAGGACAGCTACCTGACGATGCGCGGCTCGGCCAACAGCGCCGAGGGCGTCTCGCCGGTGGCGATGCGCGCCGCCGGCAGCTCGCCCGGCTCCAGCCGCAGCCCCCACAACGGTAGCGAGCAGCCGCAGCAGGAgctgtcgccgccgccgtcgcggcACGCCGACGCGCAGGGCTACAGTCCCAGCCAGGAGCAGGCGCGTATGCAGAGCTTCACCCACCTGACCAACATGCAGCCGGCCATTGTGAACGTCAACCATCTGCAGCCGGACGACAGGGTGCAGCCCGAGCCGCTCTACATCGACTCCATCTACGCGCAGCATCATCAGGTCGCCGCggcggccgccgccgccgttcatcatcatcaccaccCCGACCACGACCAGAACTCCACGGCACCGCACTCGCCGACCAGCGCTGGttcgTCGTTGTACCGAATACCGGGCGTCGGAACGATCGGCAGTGGCAACGGTTCCGCGCCAAGCTACTCGATGTACATGAATCCGTCTGCCGATCTCGGGCCAGGACCACAGCAGATATGGACTTCCCAAGTGTCAGGTCTACCGCCGCTCGGCGACGAGTACGTGGGCAAATCGACGTCGTCGGTGGTCAGTCACCAGAGTCTACCGGCGTTCTCGCAACCCTTCCCAACTCGCTTCCGCTACTCGCCGTCCTACAGCACGCAACAGGCGTCGGCCGGCGAGATAGTCACGTGGTCGACTTACAACGCCGCCCAGGCTGCCGTCGCCGCGGCCGACTCGCCCTACAGCGGCACCAACCTCGTCACCAACTCTCAGCACCGAAGGCAATCCAGCTCGGCCGTCAGCTCCTCGTCCTGCGTCACCACTCCGCACCAGCTGCCGCCTGCTCTTTCTACaatgcaCAACATCGAGGCCGAGTACTTTACGGAAGGCCGTGAGTGCGTGAATTGCGGGGCGGTGTCGACGCCGCTGTGGCGACGCGACGGCACCGGACATTACCTCTGCAACGCCTGCGGACTCTACCACAAGATGAACGGCATGAATCGGCCACTGGTCAAGCAATCACGCCGTATGtcggCCTCCAGACGCGCTGGCTTGCAATGCAGCAACTGTCACACACAGACGACGTCGCTGTGGcgtcgcaacgcccagggtgaCCCGGTCTGCAACGCTTGCGGGCTCTACTTCAAATTGCACGGCGTCAACAGGCCACTCACCATGAAGAAGGACGCCATCCAGACGCGCAAACGCAAACCCAAGAACGTCAAGATCGGCGACACTCCCATCACCGGCTCAGTACCTCCTTGCACCATTCCgcacaacaataacaacaacaataataacaacaacaataatacCCTCAAGCTCGATCCAgacaCTTTGAACTTCAACTGCCTGAATCACGCTGGTGTCACGCAGACGAGTTACGTGCAGGGCTTGTATGGCAGCCAGACGCCGGTCAGTCGGATACAGACGATCTCATACCAGCCAGAACTGTACTACGATGcgctgcaacagcagcaacatcaTCATCAGGATCAGCAGCAGAGCCACGTGCAGGAGGCTCATCATTCGCCAAAGGAGGAATGCCCGTCGCCACCGTGCGCCACTCGCTCGCCAGTACTCACCTCGGCTGGACACTCGCCTGACCGTCATCAGGCTTCGCACATCGTCTCTCTCAGCAATTCCTCGCCGGGTCCCAATGGCAAACTTCTCATCGACACGATAGATCGCCCCACCGTCGTCTCCATATCCTCGTAG
Protein Sequence
MWNNIEAASHRDSPSVEAAAAESNGLKVERAVSRRLEEEGGEGGVSGSPGVAEAGHPDGAKNGVDFGVVEQRHQQQHQQWLATGCFQHSKPDATAYHGLHASFALRQLAYLEQQQHTLGNQRFQIETSAYGSSIIERSTHHQQGQIVDPAEFQQQPARHISRESSSSQHQPHYHHHHHHQRAATAAASAAAETGAGEVPAVPEGGDSQPPSSQASVPTEGKSAVSHMPLVAMHRYSAATAEALSPEHHHHHHHHHHHNPHHGLGRHDDPQQQHDERTSAINLNVYLPSLGSQPGSNSSSGSHHHQQQQQQHLDDVLQHEDSYLTMRGSANSAEGVSPVAMRAAGSSPGSSRSPHNGSEQPQQELSPPPSRHADAQGYSPSQEQARMQSFTHLTNMQPAIVNVNHLQPDDRVQPEPLYIDSIYAQHHQVAAAAAAAVHHHHHPDHDQNSTAPHSPTSAGSSLYRIPGVGTIGSGNGSAPSYSMYMNPSADLGPGPQQIWTSQVSGLPPLGDEYVGKSTSSVVSHQSLPAFSQPFPTRFRYSPSYSTQQASAGEIVTWSTYNAAQAAVAAADSPYSGTNLVTNSQHRRQSSSAVSSSSCVTTPHQLPPALSTMHNIEAEYFTEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQSRRMSASRRAGLQCSNCHTQTTSLWRRNAQGDPVCNACGLYFKLHGVNRPLTMKKDAIQTRKRKPKNVKIGDTPITGSVPPCTIPHNNNNNNNNNNNNTLKLDPDTLNFNCLNHAGVTQTSYVQGLYGSQTPVSRIQTISYQPELYYDALQQQQHHHQDQQQSHVQEAHHSPKEECPSPPCATRSPVLTSAGHSPDRHQASHIVSLSNSSPGPNGKLLIDTIDRPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-