Basic Information

Insect: Galeopsomyia nigrocyanea
Gene Symbol: ZNF341
Assembly: GCA_035047105.1
Location: JAWWMK010052709.1:6950-10053[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.011 1.7 10.4 4.0 1 23 45 67 45 67 0.98

2 13 0.00054 0.088 14.5 6.0 1 23 219 241 219 241 0.99

3 13 2.6e-07 4.3e-05 24.9 0.4 1 23 247 269 247 269 0.98

4 13 0.013 2.1 10.1 1.3 1 23 294 317 294 317 0.96

5 13 0.035 5.7 8.8 0.2 1 23 323 347 323 347 0.98

6 13 0.00018 0.029 16.0 1.4 1 23 352 374 352 374 0.98

7 13 0.0031 0.5 12.1 3.9 1 23 386 410 386 410 0.91

8 13 0.00027 0.043 15.4 2.0 1 23 412 434 412 434 0.98

9 13 6.8e-06 0.0011 20.4 0.2 1 23 440 462 440 462 0.96

10 13 0.00011 0.017 16.7 1.4 1 23 468 490 468 490 0.98

11 13 0.016 2.5 9.9 0.8 5 23 505 523 496 523 0.79

12 13 0.28 46 5.9 11.5 1 23 529 551 529 552 0.95

13 13 0.0013 0.21 13.3 3.9 1 19 554 572 554 575 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.011	1.7	10.4	4.0	1	23	45	67	45	67	0.98
2	13	0.00054	0.088	14.5	6.0	1	23	219	241	219	241	0.99
3	13	2.6e-07	4.3e-05	24.9	0.4	1	23	247	269	247	269	0.98
4	13	0.013	2.1	10.1	1.3	1	23	294	317	294	317	0.96
5	13	0.035	5.7	8.8	0.2	1	23	323	347	323	347	0.98
6	13	0.00018	0.029	16.0	1.4	1	23	352	374	352	374	0.98
7	13	0.0031	0.5	12.1	3.9	1	23	386	410	386	410	0.91
8	13	0.00027	0.043	15.4	2.0	1	23	412	434	412	434	0.98
9	13	6.8e-06	0.0011	20.4	0.2	1	23	440	462	440	462	0.96
10	13	0.00011	0.017	16.7	1.4	1	23	468	490	468	490	0.98
11	13	0.016	2.5	9.9	0.8	5	23	505	523	496	523	0.79
12	13	0.28	46	5.9	11.5	1	23	529	551	529	552	0.95
13	13	0.0013	0.21	13.3	3.9	1	19	554	572	554	575	0.96

Sequence Information

Coding Sequence: ATGGCGCAGTCAATCTTCGATGCTTTGTCGGGTGTATCCCTGGATGGCTCAACAGTACAATCATTATTAGAGTCACAGACTCTGATTAGTGAAGTAGAACAATCAGCAATAGATCAAGATGAAGATGATATATTTCAATGTGGCAAATGTAAAACTCAATTTACCTCACTACACCTTTTCGTGCTGCACAAAAGGGAGCACACAAAGGTTCAAGAGCAAACTGTAGATTTAAGTCAATATTTAGTCAACAATGATAGCCACACAGTTCAGACTGATGATAATTGCCAAGATGGTACTTCCTACAATCCTGAGGATGATTTCAGTCAGACTCATACACTTGGAGAACCAATTATTTTGGAGGATAATGATATCCTATTTAGCATGGACCAAGAAGGTGCCAGCTACTTGACATCAGACTCAAGTTTTGGGGTGCctataattatgaataacgaAGGTTTAGATACTTTTGCCAACTCGTCAATCACTGAACAGTTGGATGATCGATTAAATGAGGACATACAAGCTTTGGAGACCGACATCGAAAGGAATTTAGATGACAGTGATACACCAATTACAGATGATGCTCCCAAAGAAGATCCTCCAGCTGAGAGTCCAGAGCAGGATAACCAATTGGGCCAAACGCAAAACTTAAAATATAAATGCAGCTACTGCCACAAGCAATTCGCGAAGAAGTTCTACTGGCAGCAGCACGAGCGTTCGCACACAGGCGAAAAGCCTTATCAGTGCGTCGTCTGTGGCCGTCCTTTCGCCCAAAAGTCCAACGTGAAGAAGCACATGTCCTCGCACAAAGTTTGGCCTGGCACAGCCATACATTCGCTACCTCCCGAGGCACCGATCGACGGTAGCATTGAGCGCTCTTATCACTGTCAATTCTGCAAAGAAATCTTTGACTCTTACAAAGCCCTCAAAGGTCATCTCATCGTATCTCACCTCACGCTCAAGGTTTACAAGTGCGTGCAGTATGGCTGTGGATCGATGTTTGCCGAGCTCGAAGATTTTCTCGAGCATACCAGAAGTCACAAGAGATCAGAGTATCGATGCCACGTCTGCGGCGACACTTTCAATACGTTGTCCGATTTGGGGCTTCATCAGTACACGCACTCCGTCCAAAAACAGAAAACTTCCGAAAAatattaCTGCTGCTCGATATGCAAATCATCATTCTCAAACCTCGAAGCGTTGCAGCATCACACCGAGACGACTACTCACGATTATGCATGTCCTCACTGCGGCAAGAGTTTCCTAATCGAGAGGTTCCTACGTCGACATTTGAAAACTCACGCCTCGTCGGCGCGCTTTGCTTGCGAGGATTGCGGCAAAGCTTTCAAAACCGAGCAATACTTGGCTAATCACAAGCTTATACACAGTGAGGAGACGCCGTTTTCTTGTCCGCACTGTGCGGCCAAATTTAAAAGGAAAGACCGTCTCGGTCGTCACATGCTCATCCATGATTTGACCAAGCGGCTTAAGTGTCCGTTTCGCGGTCATCTTGGTTGTATGAGTGAATTCTCAAGACCGGACAAGCTCAAACGTCACCTACTTACCCACAGCAATATCAAGCGATTCAGTTGTCGTCACTGCAATCGACACTTTCATCAAGCTCAAGCGCTCAAACACCATGAGATCAAGCATCATGGATTCAAGTGCGATGTTTGCTCGCATTCGTTTAAGTCCAAGGATCAGTTACTGAATCACAATTGCGACCAGACATCCGAAGTGAAGAAGCATACGAGCTCACAGCTGCCAAAGAAAGCTTCGGGATCGTTCAAGCCAAGACGGCCGACACCCAAGCGACAAACTATTTCTAAGAGTCCCACTACGACTGCGCTCAACATTTCCGACAGGGAGAAAGATAAAGCCAAAGCTGAAGAGGCACAGAGAAAGAGCGTACTAGAGCTTTTGAAGCGAGAAGACGACTTCGACATGAAAATTGATCTCGACCTCGATCTGAGTAACGAGTGCTCTTTAACACTAGATCCTCTTGAAAAGTGA
Protein Sequence: MAQSIFDALSGVSLDGSTVQSLLESQTLISEVEQSAIDQDEDDIFQCGKCKTQFTSLHLFVLHKREHTKVQEQTVDLSQYLVNNDSHTVQTDDNCQDGTSYNPEDDFSQTHTLGEPIILEDNDILFSMDQEGASYLTSDSSFGVPIIMNNEGLDTFANSSITEQLDDRLNEDIQALETDIERNLDDSDTPITDDAPKEDPPAESPEQDNQLGQTQNLKYKCSYCHKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPIDGSIERSYHCQFCKEIFDSYKALKGHLIVSHLTLKVYKCVQYGCGSMFAELEDFLEHTRSHKRSEYRCHVCGDTFNTLSDLGLHQYTHSVQKQKTSEKYYCCSICKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEETPFSCPHCAAKFKRKDRLGRHMLIHDLTKRLKCPFRGHLGCMSEFSRPDKLKRHLLTHSNIKRFSCRHCNRHFHQAQALKHHEIKHHGFKCDVCSHSFKSKDQLLNHNCDQTSEVKKHTSSQLPKKASGSFKPRRPTPKRQTISKSPTTTALNISDREKDKAKAEEAQRKSVLELLKREDDFDMKIDLDLDLSNECSLTLDPLEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691382;
90% Identity: -
80% Identity: -