Basic Information

Insect: Galeopsomyia nigrocyanea
Gene Symbol: ZNF236
Assembly: GCA_035047105.1
Location: JAWWMK010000040.1:7725173-7738021[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00015 0.024 16.3 3.5 1 23 174 196 174 196 0.97

2 27 0.0007 0.11 14.1 2.4 1 23 202 224 202 224 0.97

3 27 1.4e-05 0.0023 19.4 0.3 2 23 230 251 230 251 0.97

4 27 6.7e-06 0.0011 20.4 0.1 2 23 258 279 257 279 0.96

5 27 0.007 1.1 11.0 2.6 2 23 291 312 291 312 0.97

6 27 4.2e-06 0.00068 21.1 0.8 3 23 336 356 335 356 0.97

7 27 7.3e-06 0.0012 20.3 1.3 1 20 362 381 362 384 0.96

8 27 0.00055 0.09 14.4 4.7 1 23 390 413 390 413 0.96

9 27 0.0028 0.46 12.2 2.6 1 23 422 445 422 445 0.98

10 27 3.5e-08 5.7e-06 27.6 3.0 1 23 566 588 566 588 0.99

11 27 2.1e-05 0.0034 18.9 0.5 1 23 594 616 594 616 0.98

12 27 0.015 2.4 9.9 0.4 1 23 622 644 622 644 0.98

13 27 0.00029 0.047 15.3 1.8 1 23 648 670 648 670 0.92

14 27 0.0042 0.69 11.6 5.9 1 23 724 746 724 746 0.98

15 27 1.5e-05 0.0024 19.4 1.0 1 23 752 774 752 774 0.98

16 27 2.9e-05 0.0047 18.4 0.5 1 23 780 802 780 802 0.98

17 27 0.00012 0.02 16.5 4.4 1 23 808 830 808 830 0.98

18 27 0.057 9.3 8.1 3.0 2 23 1083 1104 1082 1104 0.95

19 27 0.0011 0.17 13.5 2.7 1 23 1110 1132 1110 1132 0.98

20 27 0.00011 0.017 16.7 2.6 1 23 1138 1160 1138 1160 0.97

21 27 2.1e-07 3.4e-05 25.2 1.8 2 23 1192 1213 1191 1213 0.98

22 27 0.00038 0.061 15.0 4.4 1 23 1219 1241 1219 1241 0.98

23 27 0.00016 0.026 16.1 1.6 1 23 1247 1269 1247 1269 0.97

24 27 0.00035 0.057 15.1 2.1 1 23 1275 1297 1275 1297 0.98

25 27 2.5e-05 0.0041 18.6 1.7 2 23 1512 1533 1512 1533 0.97

26 27 2.4e-06 0.00039 21.8 4.9 1 23 1539 1561 1539 1561 0.98

27 27 3.4e-07 5.6e-05 24.5 0.6 1 23 1567 1590 1567 1590 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00015	0.024	16.3	3.5	1	23	174	196	174	196	0.97
2	27	0.0007	0.11	14.1	2.4	1	23	202	224	202	224	0.97
3	27	1.4e-05	0.0023	19.4	0.3	2	23	230	251	230	251	0.97
4	27	6.7e-06	0.0011	20.4	0.1	2	23	258	279	257	279	0.96
5	27	0.007	1.1	11.0	2.6	2	23	291	312	291	312	0.97
6	27	4.2e-06	0.00068	21.1	0.8	3	23	336	356	335	356	0.97
7	27	7.3e-06	0.0012	20.3	1.3	1	20	362	381	362	384	0.96
8	27	0.00055	0.09	14.4	4.7	1	23	390	413	390	413	0.96
9	27	0.0028	0.46	12.2	2.6	1	23	422	445	422	445	0.98
10	27	3.5e-08	5.7e-06	27.6	3.0	1	23	566	588	566	588	0.99
11	27	2.1e-05	0.0034	18.9	0.5	1	23	594	616	594	616	0.98
12	27	0.015	2.4	9.9	0.4	1	23	622	644	622	644	0.98
13	27	0.00029	0.047	15.3	1.8	1	23	648	670	648	670	0.92
14	27	0.0042	0.69	11.6	5.9	1	23	724	746	724	746	0.98
15	27	1.5e-05	0.0024	19.4	1.0	1	23	752	774	752	774	0.98
16	27	2.9e-05	0.0047	18.4	0.5	1	23	780	802	780	802	0.98
17	27	0.00012	0.02	16.5	4.4	1	23	808	830	808	830	0.98
18	27	0.057	9.3	8.1	3.0	2	23	1083	1104	1082	1104	0.95
19	27	0.0011	0.17	13.5	2.7	1	23	1110	1132	1110	1132	0.98
20	27	0.00011	0.017	16.7	2.6	1	23	1138	1160	1138	1160	0.97
21	27	2.1e-07	3.4e-05	25.2	1.8	2	23	1192	1213	1191	1213	0.98
22	27	0.00038	0.061	15.0	4.4	1	23	1219	1241	1219	1241	0.98
23	27	0.00016	0.026	16.1	1.6	1	23	1247	1269	1247	1269	0.97
24	27	0.00035	0.057	15.1	2.1	1	23	1275	1297	1275	1297	0.98
25	27	2.5e-05	0.0041	18.6	1.7	2	23	1512	1533	1512	1533	0.97
26	27	2.4e-06	0.00039	21.8	4.9	1	23	1539	1561	1539	1561	0.98
27	27	3.4e-07	5.6e-05	24.5	0.6	1	23	1567	1590	1567	1590	0.97

Sequence Information

Coding Sequence: atgaatttgatgatACCAATGTCACCCAagcttgtaaaaaatttacttgcaGCTCACCAACCTGCAAATACAAGCTTGCAACTGGCAAGTACTCCACTGATAATTGTACAAGATGGACCTGAAAATTCTTCCAACTGGTTTCAAGTTCCCAACAGTGATGTACTcgttaaaaatGTAAAATTAAATCTTCCTGTAAGACACATTCAACAACCCTGCGTGTCTCTAAGAAGTGTTAGGAATGCACATCCAACAAATACACTTGTATCAAGTGAGAGAAACAGTGATTTGGAAGAATCGTCAGACGACATTGAAATTATGGAGTCCTTTTCCAATACAAGCATCATTCAACCaagtacaatgaaaattttatcatctgGAAAGACAGCtactatacaaaaaataatagagtCCCTTCCAAAGGAAACTGAAATAATCGCTTTAGATGAGCCTAAAGAGCCTGTTCGAAAGAGAGGAGGAAAGCCATCGAAAAATTGGAGAGATGCCATGAAAGATaCTCATTTTAAATGTGATGTATGCGATGAAGAATTCAAAAAGCGGTACTTATATCAAAGGCATATGCATGAACATTCCCAAGAAAAACCTCATCATTGCCCCAAATGTTCTGCATCGTTTAATGTGCCAacGAATTTCACACTACACATGGCAACACACAACATTGGCGAGCCAAAGTGTCCCATGTGCAACAAGCGATTCGCTCGCATAGCCAGTCTCAAGGCGCACATGGTTATGCACGAGAAAGATGAGAATCTTTACTGTCCCGAGTGCGATGGGGTTTTCGAAACGAAGTCTCAGCTGGAAGCGCATATGAAGCTACACGACACGGAGAAGTGGCCGAGCGAAGATTTTCGCAAATGCAAGCTCTGCCGGGCAAAGTTCACTCATCCGGCGCTCTACCGACAGCACTTGCGCGACCATTATAAAgtaCAGACGAAGATCGAGAGGCTGACGAAACGTGGCGTCGTTAAGCAGAGGACCGTCAATAGCTGTCGAATTTGCAAGAAATCTTTTGAGAAACCAAGTCAGCTGGCACGACATTTGAGGGTTCATACTGGCGAGAAACCTTACAAGtgcaatCTGTGCAATCGCAGCTTCACGCAAAAAGgctcgttgaaaattcacaTGTGGCAGCACGACGGCAACAGGCCTCACAGCTGCTCGTTTTGCCACGCTAAATTTAGTCAAAAAGgaAACTTGAATTCACACATTTTGAGAACGCACAAAGTTCGCGAAGGTTCGACGGTTTATCGCTGTTCGCATTGCCCGTGTATGTTCAAAACTCTCGGTAGCGTGAATGGTCACATCAATCGAGTTCACAGTAAGGACAAACAGTCGAACAAGGGCGCTGAAAATCAAGAGAATGAAGAAGGCGAAGCTGAGAGAAACGACGATGAGATTCACGAAGTTATGAATCAGATTGCCGATCTTGAATCGTGCGTGCAGAATACGAATCTCGCCAGGCGTCCCGGCGAGGACGATATTGTTTGCGAAACTGgcaagaaaaaggaaaaagtagTCAATGGCGCACCTGAGAGCGATCAAAATTTGCAGGAGGGTTTTGTTGTTACGGACGATAACGCGAAAACGGCGATGGTTACGGTTCTGGACGAGGCTTCCAGTGAAGTAGAACGaaaGTACGTTAAGTTAAAACAGCGATATGTAAATAACTCTAGGGTCTACGAATGCTCCCACTGtgataaaacattcaaaaagcCATCGGATCTCAGGAGGCATTTAAGAATTCACACGCAAGAAAAACCATTCAAGTGCGACGTTTGCAATCGGAGGTTCAGTTTGAAATCAACTTTAGTCGCGCATGGGCGTGTGCACATGATGGAGGAAAGATTCAGGTGTCAAGTTTGTAATGCCACTTGGAGATCGCAAAGAGAACTCCTTGATCATCAAAAGATACACACAGAAAGTTACACCTGTAAATTGTGCGATAAGACgttttcaagtttcaaaatGCTGAAAGACCATTCGGCAGATCACGAGGTAGCCAAGCCAAAGAAACAAGTGAGCGAGGAAGTGAAAGATTTAGTGGGAAAAGTTCGACTGAAGGATCCACTCGAGTTGAAGCTAGCGAGCAACGGTTTACTTCTAGCTGAGCCGAAACATCGTAACGACATTGTTAACGGCCGGGGTAGACCGCATAAATGCCCGTCGTGTCCGGCTGCTTTTATGAAGCTCAGCCATCTCAAGCAGCATCACCGAAAGCATACTGGCGAAAGGCCTTTTGAATGTCATTTGTGTAATAGGAGATTTACAACAATCAGTGCTCTCAACGCTCACGGTCGGATACACGACGCTACAAAACCGTTCGTCTGTCCAGTTTGCTCGGTGAATTTTACAACTAATAGCAGCATGAAGAGGCATTTGGTTACGCACACGAACAAACGGCCTTACATGTGCccatattgtaataaaacgTTCAAAACGACTGTCAATTGTAGAAAACACATTAAAGTTCATAAACTCGAAATAGCTGAGGAAGAAGTAGAGAGGCAAAAACGTGGAAAAGAACCGGCTTCGAAAGCAAATGATGGAGGAATAATACTTCAGCCTCTTTTGATTGGGACGAAACAAGACTTAAATTTGCAGCTCCAATCagctaataaagaaaaaaatcagtctTACGTGTCTATTTTGCCAGCTCCGCAAAACGTATTAACCATAGGGCAAAACCTATCCATAGTAAACAACTCTAACATAGGTGCAGCTCCAAAACTTCTTGCCAACGAGACAGGCACTGTTACACTAGCTAATTATACGAATGATCAAACTTTTACTCCTgACAACATGAAAGCATTGGAAGATACATTGAATCAGCAGTTACTTAACATTAATATGAATCTGAGATTGAACGATAATAACAAAGAAATCGAAAATCAGGCCTCGCTAGTCACTCAAAATCCCCCTATTTTGAGTATCATTTATAGTGATGGAAAGTCTTACGGATCGCAAATCAATACTTCTGCCAATACAAATAACTTTGTTCCTCAATTAGATACCTTTGATATTAATCAAATGACATTGCagACtctagaaaatgaaatcaatcCAGCAACCTCGACAAACATGACTAATATTTTACCAAATTCCCTTCAAAGAAGTCCGACTTTGAGCACAACTCCAGTGTCtgacaataataatcaaacaGTCAATATTTGTTTGACGGAAAATAATCAGtcgccaaaaaataaaattctcatCGAGGATAGCAATCTTCAATGTCACATGTGCAAAAAACGAGAGTTCACTGCCGAAAGTTTAAAAGAACATTTGAAGACACATCAAAGTAGCAGAGAATTCGAATGTACATATTGCCTTTCAAAATTCTGCTCGAGTGGCGGCTTGAGTAGacatatgaaaattcatgaaacTCCTGAGACGCATAAATGTTATGACTGCAAGCAGGAATTTTCCACATCGCGAGAATTGACAATACACATTAAAGAACACGTGAGGCAAGAATTGGAGATGAAGAACGCTATTGGTCCCAATGAAGCAATAGATGTTGGATTAAAAGATaTAAACccagaaaagaaaagtaatcAGTGTACATATTGCTCGAAAATTTTCCGTAAACCCAGCGATCTCAAACGACATATTAGAACGCATACCGGCGAACGGCCCTACAAATGTTCGCATTGCGATAAAAGCTTCGCCGTTAAATGTACATTGGACTCCCACGTAAAAGTACACGACGGTGTAAAACAATTTCATTGTTACGTGTGCAGTAACGTGTTCGCGACGAAAGGCAGTCTCAAAGTTCATATGCGACTGCACACGggtgatAAACCATTCAAATGTGATATGTGTGATGCGAGATTCCGTACTTCCGGACACCGAAAGGTCCACATGGTTTCGCATACGCGCGAACCCGGTGCTTCCAAGCGAAAATCGTCGAAACAAAACTCGCCGAATTCGATTACCGAGACGTCTCAAGAAAATTCATCGCCACAAATGATGTCCCCGGAACTCGTGCCAAATCAACATGAAGTTGAcagtcaaataataattaacgatCAGAATCAATTCGACAACATAACGATCGATCACACCCTCAACACTATAACGTTAAATTCAGTTAATGACCAGATTACTTTCAATACTGATGGAGCAATATTAAACGACACTTCGGGTCTTTTGAATCTAAACGACAACAATCAATTCGTTGCGAATTTACAGTACTTTTTGGCAAACGGACTTGTTTCGATGCGAGTGGGCGATCCTACAATCAACGCCCAATTACCCGTGCCGGTAGTCGACATTGTTCCTGGAGATTTCGATGAGATTAATGCAAGCGATGCCCAAAAGGAAATTTCTGAGTCGCAAATTGTCTTCTCACCTGAAACTCTCAATCAGAATTCCGAAATGACGAATGTCAATAATTTCGATTTGGAAAATTGTATGGTTCTTCATTTGGATGATAATGGAGCTATGTCGTATCCCGTCAAggagaaaattaaaactccGAAACAGCCGAAAACttcaaaTGTTGCAGCGAGACGCGAGTGCGACATTTGCGGTAAAACGTTTTCCAAGCCATGCCAAGTTGAGCGACACAAGCGTGTTCATACGGGCGAACGACCTTTCAAATGCGAACTCTGCGACAAGTCCTTCTCTCAAAAATCCACTCTACAGATGCATCAAAAACACCACACTGGAGATCGTCCGTATCCTTGTCCGCAGTGCCAACGCTCCTTCACTCAGAGCGGAAATCTGCAAACTCATTTGAAACGCGTTCACAAGCTTGATCCTGCGGACGTCAAGCGTTTGACTAATAAGCAGCAGAATTCTAACATTGATGTGAAATCGATCGTTGACGAAATAAGAGCTCTTGactttgttgatttttcatttgcggATTTGTTGAAGTGA
Protein Sequence: MNLMIPMSPKLVKNLLAAHQPANTSLQLASTPLIIVQDGPENSSNWFQVPNSDVLVKNVKLNLPVRHIQQPCVSLRSVRNAHPTNTLVSSERNSDLEESSDDIEIMESFSNTSIIQPSTMKILSSGKTATIQKIIESLPKETEIIALDEPKEPVRKRGGKPSKNWRDAMKDTHFKCDVCDEEFKKRYLYQRHMHEHSQEKPHHCPKCSASFNVPTNFTLHMATHNIGEPKCPMCNKRFARIASLKAHMVMHEKDENLYCPECDGVFETKSQLEAHMKLHDTEKWPSEDFRKCKLCRAKFTHPALYRQHLRDHYKVQTKIERLTKRGVVKQRTVNSCRICKKSFEKPSQLARHLRVHTGEKPYKCNLCNRSFTQKGSLKIHMWQHDGNRPHSCSFCHAKFSQKGNLNSHILRTHKVREGSTVYRCSHCPCMFKTLGSVNGHINRVHSKDKQSNKGAENQENEEGEAERNDDEIHEVMNQIADLESCVQNTNLARRPGEDDIVCETGKKKEKVVNGAPESDQNLQEGFVVTDDNAKTAMVTVLDEASSEVERKYVKLKQRYVNNSRVYECSHCDKTFKKPSDLRRHLRIHTQEKPFKCDVCNRRFSLKSTLVAHGRVHMMEERFRCQVCNATWRSQRELLDHQKIHTESYTCKLCDKTFSSFKMLKDHSADHEVAKPKKQVSEEVKDLVGKVRLKDPLELKLASNGLLLAEPKHRNDIVNGRGRPHKCPSCPAAFMKLSHLKQHHRKHTGERPFECHLCNRRFTTISALNAHGRIHDATKPFVCPVCSVNFTTNSSMKRHLVTHTNKRPYMCPYCNKTFKTTVNCRKHIKVHKLEIAEEEVERQKRGKEPASKANDGGIILQPLLIGTKQDLNLQLQSANKEKNQSYVSILPAPQNVLTIGQNLSIVNNSNIGAAPKLLANETGTVTLANYTNDQTFTPDNMKALEDTLNQQLLNINMNLRLNDNNKEIENQASLVTQNPPILSIIYSDGKSYGSQINTSANTNNFVPQLDTFDINQMTLQTLENEINPATSTNMTNILPNSLQRSPTLSTTPVSDNNNQTVNICLTENNQSPKNKILIEDSNLQCHMCKKREFTAESLKEHLKTHQSSREFECTYCLSKFCSSGGLSRHMKIHETPETHKCYDCKQEFSTSRELTIHIKEHVRQELEMKNAIGPNEAIDVGLKDINPEKKSNQCTYCSKIFRKPSDLKRHIRTHTGERPYKCSHCDKSFAVKCTLDSHVKVHDGVKQFHCYVCSNVFATKGSLKVHMRLHTGDKPFKCDMCDARFRTSGHRKVHMVSHTREPGASKRKSSKQNSPNSITETSQENSSPQMMSPELVPNQHEVDSQIIINDQNQFDNITIDHTLNTITLNSVNDQITFNTDGAILNDTSGLLNLNDNNQFVANLQYFLANGLVSMRVGDPTINAQLPVPVVDIVPGDFDEINASDAQKEISESQIVFSPETLNQNSEMTNVNNFDLENCMVLHLDDNGAMSYPVKEKIKTPKQPKTSNVAARRECDICGKTFSKPCQVERHKRVHTGERPFKCELCDKSFSQKSTLQMHQKHHTGDRPYPCPQCQRSFTQSGNLQTHLKRVHKLDPADVKRLTNKQQNSNIDVKSIVDEIRALDFVDFSFADLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -