Gnig004190.1
Basic Information
- Insect
- Galeopsomyia nigrocyanea
- Gene Symbol
- Cdc5l
- Assembly
- GCA_035047105.1
- Location
- JAWWMK010000021.1:2771628-2772649[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-13 2.8e-10 41.3 0.5 2 46 9 54 8 54 0.97 2 2 1.5e-15 2.4e-12 47.9 0.0 1 43 60 102 60 105 0.94
Sequence Information
- Coding Sequence
- ATGTCACGTTTTTCAAAGAAAGGAGGTGCTTGGCGTAATTCAGAGgatgaaattttaaaagcagCTGTCATGAAATATGGTAGAAATCAATCCAGCCGAGTAGCATCTCTACTCCACAGAAAATCTGCCAAGCAATGTAAAGCTCGTTGGACTGAATGGTTGGATCctagcattaaaaaaactgaatggAGTGCTGAAGAAGATGAGAAACTGTTGCATTTAGCAAAGTTGATGCCGTCGCAATGGAACACTGTAGCACCAATGATGGGTGGTCGTACAGCAACTCAATGTATTGAAaggtttgaatttttgttggaTCAAGGACAACAAATGAAAGAGGATAATAGTTCAGATGGCCTTAGAAATTTAAAACCTGGTGAATTAGATCCAAATCCAGAATCTAAACCAGCTTTGCCTGATGCCAAAAACATGGATCAGGACGAGTTGGAAATGTTAGCAGAAACTAGAGCAAGACTTGTTAATACTCAGGGTAAGAAAGCTAAAAGGAAAGCTTATGAAAAGCACATGAAAGAAGCTACAAGATTAGCTGCTGaacaaaagagaaatgaaTTGAAAGCCGCTGAAATTCCAGTTGAACGCAAAGACAAGACTGGAATGAAATACATTGCTGCAGTTCcattcaaaaagaaatcgGCTCCAGAATTTTATGATACATTTGATGAACAGAACAATTCTACATTTGGTGGTATTTCAAATTCAGAGCAGCCAAATGTTGCAATTGagagaaataacaaaatactAGGAAATGAactaaataatgaaaagagGTTAAAAACAAGAAAGGAAGAAGTGCCTTCTAGTATGATGACAGAAAAACTTTCAAGAAAGAGCAATAAACTTATATTACCAGAACCACTAATCTCAGATAAAGAAATGCGAAAGGCTGCCAAATTGGAAAAGATATTTGAGGTACATTAA
- Protein Sequence
- MSRFSKKGGAWRNSEDEILKAAVMKYGRNQSSRVASLLHRKSAKQCKARWTEWLDPSIKKTEWSAEEDEKLLHLAKLMPSQWNTVAPMMGGRTATQCIERFEFLLDQGQQMKEDNSSDGLRNLKPGELDPNPESKPALPDAKNMDQDELEMLAETRARLVNTQGKKAKRKAYEKHMKEATRLAAEQKRNELKAAEIPVERKDKTGMKYIAAVPFKKKSAPEFYDTFDEQNNSTFGGISNSEQPNVAIERNNKILGNELNNEKRLKTRKEEVPSSMMTEKLSRKSNKLILPEPLISDKEMRKAAKLEKIFEVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -