Basic Information

Insect: Galeopsomyia nigrocyanea
Gene Symbol: ct
Assembly: GCA_035047105.1
Location: JAWWMK010000008.1:6953245-6965327[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.8e-28 8e-24 84.6 0.0 2 72 436 507 435 512 0.95

2 4 0.037 5.1e+02 1.9 0.0 20 52 623 658 619 663 0.80

3 4 2.2e-32 3.1e-28 98.8 0.0 3 77 885 960 883 962 0.96

4 4 8.7e-31 1.2e-26 93.7 0.0 3 75 1136 1209 1134 1213 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.8e-28	8e-24	84.6	2	72	436	507	435	512	0.95
2	4	0.037	5.1e+02	1.9	20	52	623	658	619	663	0.80
3	4	2.2e-32	3.1e-28	98.8	3	77	885	960	883	962	0.96
4	4	8.7e-31	1.2e-26	93.7	3	75	1136	1209	1134	1213	0.95

Sequence Information

Coding Sequence: ATGTTGCGCAGGCACATGAGTATCAGCCAGCTGAGGGAGGAGGTGACGAGGCTGCAGTTGAGCTTGCAGCGGCTACAGGAGACGAGCGCGCAGGCGAGCGCGCGGCTGGAGGAGGAGCTGGAGGCGCGCAGGCAACACATCAACCGGCTGGAGGCCAAGCTCGAGCGCCAGAAAGACTACGAGGAGCTGAAGCGCGAGATCAGCGTGCTGAGGTCGGTCGACCTCTCGCAGATCCCGACCGGCGAGGCCGGCAAGAGCCTCGAGCAGGTGCTCATCGAGCGCTCCAAGGCCCTCCAGCAGGCCGAGAGCCTCAAGCCGCCCAGCACCCCCGATGCTCTCGGTGGATTATCGTCGCCCCTGCAGCGGGCCGCGACGGCCTCGCCGCACGGCGCGGTGATCGCGCCTCCATCGTCGACCCTATCCATGTCCATGTCCTCGCAGTCCGCGCTGCCGAGCCGCTCCACCCCCACGCCCTCGTCCCAGGCCTCGTCGGCGGGGCCGGCTGTCACCCCCGTCGGCTCGGTCTCGAGCTCGCTCCTATTCCCACCGGGCCTCCAGAACGTCGAGACCTTCGGCTCGTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGCTCCCTGGAGAGGTCGTTCAtgagtcagcagcagcagcagcagcagcatcagcatcagcatcagcagcagcatcagcaacaGCCGAGCTCGCAAGCGTCCACAGTCGGACTCCATCCGCCAGCCGGCGGCAGCatcggcagcagcaacagcagcagcggcctGGCCAACCACGCGCTTAACCATCTGCCTTCGCCGACAGATCACCCGGGCACGCCCGCCAACTCGGAGCCCGCGGAGAAGGCGATGACGCCGTTGAGCGGCCACGAGACCCCGGCGCCGGCCACCCCCTCGTCCACGGCCACGCTCacgtcgccgccgctgctgcagcCCAGCGACGTGGTGGCCGTGACGATGAACGGGCCACTCGGCCCGGCCAAGAGCCCCGCCGAGGAGTCGGCCGCCtgccacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagccaCCACCTggccaacaacaacaacatcgGTGGCGGCGTCGCCGGCCTCAGCATGCTCGACAGCCTCAAGAGCCCGTTCCGCTTCGACGAGCGCACGCACCCGTTCAGATTCGGCGACGAGTTCGGGGCGGCCGGCATGGTCGGGCGCCTCGGCGAGTCCCTCATACCCAAGGGCGACCCCATGGAGGCGCGGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACCCTGCACATCGCGCGCCGGGTACGCGAGCTGCTGTCCGTGCACAACATCGGCCAGCGGCTGTTCGCCAAGTACGTGCTCGGCCTGTCGCAGGGCACGGTCAGCGAGCTCCTCAGCAAGCCCAAGCCTTGGGACAAGCTCACGGAGAAGGGTCGAGATAGCTATAGAAAAATGCACAGCTGGGCCTGCGACGACAACGCTGTCCTGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCCGGGAATGCCTGGGTTCGCTCGAGGTCCACAGGAAAGTAGCACGCCCGGGGCCatgaacagcagcagcagtaataGCGCCAATAATCCCAGCGCCAACCAGGAGTCGAACGAGGCTCATATGCTCGGCGACTGCGctaggcagcagcagcagcagcagcagcagctgctgctgctcgagggCCCCGAGGGCTCGAACGACGCCGACAGCAAGAGCCCCAGTCGGCTCAACTGCCCGAGCCCCTTCGCCGGCGGCAAGGACAGCCAGAACCGCAGACCCAGAAAGTACGAAAACGACGACATTACCCAGGAGATGCTAGCCAAAATCTACCAGGAGCAGCTTGCGAAGAGCAAGGGCCGTCGCAGCGACGATCTCCGCGGACCCCGCGACTTTGCTGCCAGCGCGATGTTTCCGCACTTTTTCAGCGGGCAGAACCTGCAGGGAATCGAGCGCACGCAGGACGAGATACGCATGGCCCTGGACGCCTACCACGAGCTGCAGAAGCTGAACGCGACCCAAGGCCTGACCTACCCGCCGCAGATCTCGCTGCTGGCGCTGCAACAGCACGCCATCCAGCAGCACCACCTGGCGACCAACGGCGGCGGGGCCGCGGCGGGCGGACCTGCGGGCGGAGCCGGATccgcggccgccgccgccgcagcagcagcagcagcagccgccgccgcgcagGACCTCAGCCTCGGCAACATCCTCCGCAGCAAGATGATCAACGGCGTGTCGGAGGAGGACAAGGAGAAGATGGAGGAGGCCATGCGGCACGCGGGCAGCGCGTTCTCGCTGGTGAAGCCGAAGCAGGAACCAGCGGCGCAGCCGGGCAACCAGTCGACCCCGGGCGGCTCGAGCGCGAGCTCGCCCCTCGGCAACTCGATCCTGCCGCCGGCGATGACGCCCAGCGAGGAGTTCGCCGGGGCCGCGGCGGCCAGTCCCCTGCAGAGGATGGCCTCCATCACCAACAGCCTCATCAGCCAGCCGCCCACGCCGAGCCACCACTCCGGCAGCCAGCGTCCGCTCAAGGCCGTGCTGCCGCCCATAACGCAGCAGCAGTTCGACATCTACAACAACCTCAACACCGAGGACATTGTCAAGAGGGTCAAGGAGCAGCTGTCGCAGTACTCGATCTCCCAGCGTCTCTTCGGCGAGTCGGTGCTGGGCCTGTCCCAGGGCTCGGTCTCCGATCTGCTGGCCAGGCCGAAGCCGTGGCACATGCTCACGCAGAAGGGCCGCGAACCGTTCATACGCATGAAGATGTTCCTCGAGGACGACAACGCAGTGCACAAGCTGGTCGCCAGCCAGTACAAAATTGCCCCGGAGAAATTAATGAGGACCGGTGGCTATGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACGCCGATGAAACCCATGCCACCGACGAAACTCGTCCAAGAGCAGCTTCAAAACGCGGCGAAGGCGCAAGCGGCCGCCCAAGCAGCCGcgcaggcggcggcggcagcggcagcggcagcggcggcggcggcggtgcagCACCAACAAGACGGCGGCCCCCTGCAGCTAGGACCACCGCAACAGAGCCCACAGCATCCGCCGCATCCGCAGCAGTCGGCGATGATGCTCACACCGCCGGGCAGCCTCCTGTCGCACAGCCAACAGCTCAGCATACAAGAGCTgcagaagaagcagcagcaacagcagcagcagcagcaacagcagcagcagcagcagcaactgaGCGTCCATTCGCCGCATCATCAGATGGCGCCGTCGGCTCTGCGCGCCCTCCACCCGCACATCTCGCCGAGCGTCTACGAGATGGCCGCGCTCACGCAGGACCTCGACACACAGACCATCACCACGAAGATCAAGGAGGCCCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGAGCCAGGGCTCGGTGAGCGAGCTGCTGAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCGTTCATCCGCATGCAGCTGTGGCTGTCGGACGCGCACAACGTGGACAGGCTGCAGGCGCTGAAGAACGAGCGACGCGAGGCGAACAAAAAGCGGCGCAGCAGCGGCCCCGGCCACGACAACAGCAGCGACACCTCGAGCAACGACACGGCCGAGTTCTACCACGCGGCGTCGCCCGGGCCCGGGCCCACCTCCGCCAAGAAGCAGCGCGTGCTGTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCCTTCGCCCTGGATCCCTACCCCAACGTGGCGACCATCGAGTTCCTGGCGAGCGAGCTCGGCCTGTCGTCGCGCACCATCACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCCCACGGCCAGCCCGAGCCCCAGTCGCCGCGCGAGCCCGGCCAGCCGTTCGACCCCGTACAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGCGCCTCGGCCTCGGCGCCGTGCCCCTCGGCTATCCGCCCTACTTCGGTCCCAACCTCGCGGCCCTCGTCGGCAGCGCCCTCAAGGAGCAGTGCTCGGGCCTCGACCTCTCCATGGGCTCGCTCAAGCGCGAGCCCAACCCCGAGttcgaggacgacgacgcggACGGCGACGGGGACGGCGATGCCGAGGCGGACGCCGACGGCGACGACGCCATGAGCAACCTCGGCAGCGACGACTCGGACGGCTCGGCGGCGAGCATCAAGCGCGAGCACCGCTGCGCCGCGGAGGCCCCGGTCCTGCCAgcctccgccgccgccgccgccgccgcggccagGTCTAGCCGGCGCAAGCCCGCTGCCCCGCAGTGGGTCAACCCCGAGTGGCAGGAGCCCGCGGTCGCCGCAGcagccgccgctgccgccgccgcgagagGCGGCGACGAGGTAATCATCAACGGCGTGTGCGTGATGCAGACCGACGACTACGGGGTGAAGCGCGAGGCGAGCGAGGAGACGGTGCGCGTAGAGCCGACCCCAGTGCAGGACCGCTTCGAGGAGGACGCCCAGAGCGACGCATCGTCGAGCGCTTCGGTCACGCCGCGACGGCCGGCCCACGAGCGGGAGAGCCCCTCACCCGCGGGCTCGGCCAAGTCAGCCGCGCGACACAGCCCCTCGGCGGCTGCGGCGGGGGCGGCAGTAGCCGGGGCGGCCTCGCCCGCGGCGCCGCCCAGCGACAGCCCCAAGGACCTCGCGGTGAAGAACGAGCAGCCCGACGAGCCAGCCTGGGACTACTAG
Protein Sequence: MLRRHMSISQLREEVTRLQLSLQRLQETSAQASARLEEELEARRQHINRLEAKLERQKDYEELKREISVLRSVDLSQIPTGEAGKSLEQVLIERSKALQQAESLKPPSTPDALGGLSSPLQRAATASPHGAVIAPPSSTLSMSMSSQSALPSRSTPTPSSQASSAGPAVTPVGSVSSSLLFPPGLQNVETFGSFLGEEIVANWRRSLERSFMSQQQQQQQHQHQHQQQHQQQPSSQASTVGLHPPAGGSIGSSNSSSGLANHALNHLPSPTDHPGTPANSEPAEKAMTPLSGHETPAPATPSSTATLTSPPLLQPSDVVAVTMNGPLGPAKSPAEESAACHNNNNNNNNNNNNNNNNSHHLANNNNIGGGVAGLSMLDSLKSPFRFDERTHPFRFGDEFGAAGMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHSWACDDNAVLLLKSLIPKKEYVSGKEPGMPGFARGPQESSTPGAMNSSSSNSANNPSANQESNEAHMLGDCARQQQQQQQQLLLLEGPEGSNDADSKSPSRLNCPSPFAGGKDSQNRRPRKYENDDITQEMLAKIYQEQLAKSKGRRSDDLRGPRDFAASAMFPHFFSGQNLQGIERTQDEIRMALDAYHELQKLNATQGLTYPPQISLLALQQHAIQQHHLATNGGGAAAGGPAGGAGSAAAAAAAAAAAAAAAQDLSLGNILRSKMINGVSEEDKEKMEEAMRHAGSAFSLVKPKQEPAAQPGNQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPPTPSHHSGSQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAAAAAAAAAVQHQQDGGPLQLGPPQQSPQHPPHPQQSAMMLTPPGSLLSHSQQLSIQELQKKQQQQQQQQQQQQQQQQLSVHSPHHQMAPSALRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLDIQKERLGLGAVPLGYPPYFGPNLAALVGSALKEQCSGLDLSMGSLKREPNPEFEDDDADGDGDGDAEADADGDDAMSNLGSDDSDGSAASIKREHRCAAEAPVLPASAAAAAAAARSSRRKPAAPQWVNPEWQEPAVAAAAAAAAAARGGDEVIINGVCVMQTDDYGVKREASEETVRVEPTPVQDRFEEDAQSDASSSASVTPRRPAHERESPSPAGSAKSAARHSPSAAAAGAAVAGAASPAAPPSDSPKDLAVKNEQPDEPAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734453;
90% Identity: iTF_00734453;
80% Identity: iTF_00734453;