Gnig001147.1
Basic Information
- Insect
- Galeopsomyia nigrocyanea
- Gene Symbol
- jarid2b
- Assembly
- GCA_035047105.1
- Location
- JAWWMK010000001.1:10080855-10089187[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-21 6e-18 66.2 0.0 8 89 1367 1446 1362 1446 0.93
Sequence Information
- Coding Sequence
- ATGGTTTTAAGCCGAAATGACAAGAGGAAAAGGAAAGAAGGAGATCTTGTGGATCTCATGGATCCACTCGCTGAACCTCCAAAAAAaACCAAAATACAAGCACAAAGAAAATTTGCTCAAGGTGCAGTAACTCCAACGTACAGTCCTGTAACCACACCAGTGAAGGAGAAGGAAAAAGTCAAACCTGCAGTATTCACAGAGTTAATCACGCACAAACGGCCAAACACAGAAGATTTTTTGACGTTTCTATGTTTTCGAGgtACATCGATACTACCTCCAAGTCTAAACTTCTtcagcgcgagcgcgagcccCAAAAAAGTGAAAGCCAACCACGGGGCGAAATCGACGCTATCCAAAGCGAACGGCGTGTGCAGCAAAACGTCCCAGATCAAAAATGATAATCAGCCAGCAGCGTCTCAAAAGCAAACCAAGGAGAAGCCAGTCAACGCTTCGAAAAAGCAACGCCCAGCTCCAAAGGTACTCAAGCTCAAGACGACGAATCCGGCGATTCAGGCGCTCAAGAAAAAGTACCAGGAGCAAAGGTTGGCCAGAGAACACAAGTTAAAGAAGAAATTCAAACCGACGAACATCAAAACGCGCTCGTGTCCTGAGCCCTTACCACCGGAAAAACCCGTGGTGGTAGCGACCAAAGCACCGAAGAAAGTCACGTCCGTGGTCGACAGCAGAAGACGCGGATTGAGAAGCACGGGTTTGCCGGAGAGCGAGAAGAAGAGTCTACCGATGAGACCGGTGAAGAAACAATTGCCCGCGAAattgatgaagaagaagagactGGCGAAAGAGGAGACATCGAGCGTCGATTCGTACCCAGCGAAGAGGAAACCACAGCCGAAAGTATTGGCCAACAATCTCGTGCACAAGAAGCTCGCCGAGAAGAGCAATAAAACGCTGCAGACTCGTCGAGTTACGCGTTCGCGCGTAGATGATTCGCCTCAGACGCCGGCGAGAAGGCCGACGAGAAAGACCAAGGAGGCTGCGGCTGTGTACATGGAGATACTCGGTAGAAAGCTCGTTAGTCCGGATCTCGAGAACGACGACAATATGTCGCTGGATAGTTTTCCGGAACTTCCTAATGCTAGGAAAGCCGCGCAAACGGAGAACGAGATCAAGGCTAAAGTCAAATCGCTCAAAGGTGGTGCTCAAGCTGGTGCTaaggagaaggagaaggaaaagaaagtgACGAGTAATGCTAGTGCCAAAGTAATCAAAAAGAAAGTCATCAAACCAGTTCCTGTCTTGAACTTGAAGAGTAAACGATCTGTCAAAGTGCAGAAATATATAGAACTGGACACCGATGAAGAATCAGAAAGTTCCGAGGATAGCGAAGAAGAAACAGTCAGAAAGGTTCCTGTAGTCACGAGACGATCGTTCGTCAAGGAGAAGAAACCTGAAAATCGTAAATTACGATCGACCCGAAGTCTTGTCGATAAACTGCCAACCCCCAAGAAAAGTATTGCAAAGTCGAATGACGTTCAATCGAATACGACTGCCAGCGAAGCGACGAAAGCAGCGAAAAGTTCCGAATCGATAATCACCGCCAAAACGAGCAAAGAGTCTGTTGGTACGAAAGATTTACCAAAAGAAACTCCGAAAGAGAAGATTGTTCCTGTTGCAAAGCGTAAACGCGACTCTGTTCAAGCGCCGAAAGAAAAGGACACTCCTTCGAAAGTTTCGAAAGCCGATGTACCAAAAACCAAATCCATCAGCGAGCCTGTCGTCAATGAAGATTCAACGACCTTGCAGAAatccaagaagaagaaggataACGAGAAAGAGGAAGTAGCAGCACCACCGAAACCAAAATCCATCATCGTGGAAGCTCTTAAAACGCAGGAGACAATGAAAACATCCGACGACGAGGAATCTTTCCGTGGTTTCGCTAAACGATCGATTCTCGACGACCTCCTCGACTCCAAGGCAAATGTGCTTAAATCTAGCGGCTGCACTTATCCGTGTATTAAGAGCGatgttactgctgctgctgtcaaGTTGGAGCCTGACTTTGGCGAGCTTAAGGTATCGTCAACAACATCCTCGTCGCACAACATAATCGAGATGCCTCGCGGTCTCAATCATCACGGGCGCAAAGAGCGAATGAACATGTCAACCGAGCAAATAGAAAAGTGGTTGAGCGAGAGTTCATTGGCCAAAGAAGAAAGCAAAGTCGAGATGGACAAATACATtccaccaccgccaccaccgaGTCACGGCCACTTGTCGATATCACCGAAAATTCAACATCTCGTCCGGCCCGTCAACGTCACTTTATCCAAATTGTCGGACAGAATGAAGAATCGTTTGCCAACGCCGATCATCACGAAAATGCCAGCGATAATCTTGGCCAAACCCAAAGACAAGGTACCCGACAAAGAAGCGAcgaaagagaaggaaaaagaagCGCCACCACCcaaagaaaaggagaaaaaagtcGAGGATAAGAAAGACGAGGCCAGTGCCACTCTGACGAGAAAACTCAGCAAGGACTCGTCTTTTGGCGACGACACCGTGGACAGCGACGCGGTGTCGAAGTCAGATGCAAACTCCGTGTGCGACTCGACGGAGAAAAAGTCGCTGGCCAGTAGCAGCTCGCCGGAGAagaatcgtgttttttttcaccagGGCCGCAAAGTGCCCTTTCTGCCGAAAGTCCGAGACCGCGGCAAGCCGCCAGCCTTCGCAGGTCCCAACGTCAACGCCTCGGCGTTCTCGCCCGAGAACGAGAGCAGCGTGTACGCATTCGAGACCGAGGCGGAGACACCGCTGAGCACGCCGTTCTTTCGTCGAAAGGTGCGCGATAGCGGCCTCAAACACGATCAaggaGCTGCAGACAACAAAGAAAAGCATACGACaatcaacaaagaaaaacatacGACAGTCaacaaagaaatgaaagaagcGAGTGCAAAGGAGCCTGAATTGACCGGGCATTTAAACTCGCCGGTGGAAGCTCggaaagacgaagaagaaccacaacaacaaaaacaacagcAAGCACAACAAAAGTCACCTCCGTTGTTGGACAGAACCACCACTCCAAAAAGCTTCGAGCTTCCGAAAAGTTTCGCAGACTTGACAAACGTGCAAGTCTTGCCGCTAGACAAGTTAACAACGAGCTGGAGCAACGTCAATTACAGCGCTTCAATAGCCGTTCAAATCAATCTGGACGAGcaaaagcaacaacaacaacagcagcagcaacaacaacaacaaacagcTCAGCAACAGCAAGAAAGCACAGCGGAGGTAGAGTCTAGCGCGAGTCACAAGAGCACCGAGATATCGACGCAAACGGATACGAATGCGgataacgacgacgacgacgacaatggACAATTGTTTTACATACCGTTGCAAGCTGTCACGAGGAACACTTCGGCTCAGGGTGGTCAGCAATTGATACAAGGTGTGGCTGTTAAGTTGGGTACTGAAGGACCTACCGGACCGAATCAGAGAGTACTTTTGAAGGCGAAATTGGTGACGAAACCACCGATCTCCGTGGCGAGGTGTCCGCCCATTGGTACCGTACAACCGACGGCGAGGACGCCGCAGAATACCGAACAGACTGATGTGCCGTCGACTTCCAATGTCGATGCTGCAGTGGCGAATTTGAAAGCGGTGGAAACTTTGCAGAAAGAGACGAAAACTGTTACGAGTGTTGGGAGTAAACAGATTcacAAAACATCAACTACCGAAAAGCACATCAAATCTCCGAAAATCAAAGAAAGACGAGCTTCGATCGACAGCGTAAAATCAGGCAAAAAATCACAGTCGAAGAAACCCATCGAAGTTGTATTGCCGACGAACAATACGAAATTTCCGAAAACTAAAGAATCAAACGAAGAAGCTCGCCTCGTTGATGCTCCGATCTTTCGACCAACTGAGAAAGAATTTCAAGATCCGCTCGAGTACATCGACAAGATTCGACCGATTGCCGAGAAATTTGGCATCTGCAAAGTCGTTCCTCCTTCGAATTTCAAACCGGATTGCAAAGTATCCGACGACATGCGTTTCACGGCATACAACCACTACGTTCACCGAATGTTGAATCGCTGGGGTCCCAATGTCAAAGAGCTCATAGCTATCAAGAAATATTTAGCCACGCAGAGTATAAATTTAACTCAGCCACCGTGGATTGGCGGTATGGAAGTCGACTTGCCTCATTTGTATCAAACCGTACAAACTTTGGGAGGACTAAAGGAAGTCATCGAGAAAAAGAGATGGCAAAAAGTCGCGGATGGTATGAAAATACCAAGATCGGCTCAGGATCGTGTCACTAAGTTGGAtgatatttattgcaaatatttgcTTCCTTACGATACTCTATCGCAAGATGAAAGAGATAAACTTTTCAAAGACGTGGAAGCCGACTGGACGaggcgagaaaagagagacagGCAGGATTCTCAATCCACTGATACCgaagacgacgaggaggaagaCATTACCGAAGAGATCGAGGAATGCATCGTAAAAGGTCGCAACATGCCACTGAACGCGTTCTACAGAATCGCGCGTAATACTCAGCGAATGTGGTTCGGTGACAATCAGCGCAATGAAACCGAGGGCGCGTCGGCCGACGAGGTGGAAGTAGCGTTCTGGAAGCATGTCGTCGAGAAGAAACGCCACGTGTGCGTGCACGCGGCAAGCATCGATTCGGGTGGTCGTGGCTTTGGATTTTCCGTGGCTAAGAACAGTCCGTTCGCTCGGCATCCTTGGAATTTGAAGATTCTCACGAATAACGCTGGCTCGGTGCTTCGCGCTCTCGGACCACAGATGGGCGTAACAGTGCCAACCCTTCACGTAGGAATGGTGTTCAGCGCGTGTTGTTGGTATCGCGATCCACATGGGCTACCCTGGATCGAGTATCTGCACACCGGTGCCAAGAAAATTTGGTACGGTATACCGGACGAGCAGAACAACACTTTCCGCAAAGCCCTCACCAAAATGTTTCCACGCTACTGCAAGAACAAGACCATCTGGTTACCTTCGGATACGGCGATGGTGCCACCCGATATGCTGGTTGCCAATGGTGTGCCGCTGTGTCAAACGGTTCAAGAGCCTGGACAGTTCATCGTTGTGTTCCCCAAAGCTTTTACTTCTAGTATTTGTACTGGCTACGTGGTGTCCGAGAGCGTTTATTTCGCGCAGCCGTTGTGGCTTGAAACTGCCGAACAGGTGTTTCGGGATATACACGATAGCTGCGAGccttcaatattttcatttgaaagatTGTTATTTAGCATAATCAATGATTCTAGATCTCATATTGATGTACTTAAACAGATTTTACCAACTGTTATTAAAGtttgtaataatgaaatagaaaatcgCAAGAAATTGAAAGAACTGGGTCTCACGAATACGGAAAAACTCGCACTTCCGGAGAACGAGAAGAAGGGAAAGAATAAGAAAGTCGTGGAGGATGAAGGCGATTATGAATGTGATACATGTCGAGCAAACTTGTTTGTATCTTTAGTAAGCAATCCTACGGATGAGAGTATCTTTTGCCTAACTCATGGTATACAATAtatagagaagaagaagcaagtTTTGAAGAATTGCACGCTTATGTATACGTACAGTGAGAGCGAATTAAACGATCTTATTCACAAACTAAAGAACAGGATCGAAGCCAAATCTAAGAAGACTAATCAAACAAAACACGCTAAATAG
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMDPLAEPPKKTKIQAQRKFAQGAVTPTYSPVTTPVKEKEKVKPAVFTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFSASASPKKVKANHGAKSTLSKANGVCSKTSQIKNDNQPAASQKQTKEKPVNASKKQRPAPKVLKLKTTNPAIQALKKKYQEQRLAREHKLKKKFKPTNIKTRSCPEPLPPEKPVVVATKAPKKVTSVVDSRRRGLRSTGLPESEKKSLPMRPVKKQLPAKLMKKKRLAKEETSSVDSYPAKRKPQPKVLANNLVHKKLAEKSNKTLQTRRVTRSRVDDSPQTPARRPTRKTKEAAAVYMEILGRKLVSPDLENDDNMSLDSFPELPNARKAAQTENEIKAKVKSLKGGAQAGAKEKEKEKKVTSNASAKVIKKKVIKPVPVLNLKSKRSVKVQKYIELDTDEESESSEDSEEETVRKVPVVTRRSFVKEKKPENRKLRSTRSLVDKLPTPKKSIAKSNDVQSNTTASEATKAAKSSESIITAKTSKESVGTKDLPKETPKEKIVPVAKRKRDSVQAPKEKDTPSKVSKADVPKTKSISEPVVNEDSTTLQKSKKKKDNEKEEVAAPPKPKSIIVEALKTQETMKTSDDEESFRGFAKRSILDDLLDSKANVLKSSGCTYPCIKSDVTAAAVKLEPDFGELKVSSTTSSSHNIIEMPRGLNHHGRKERMNMSTEQIEKWLSESSLAKEESKVEMDKYIPPPPPPSHGHLSISPKIQHLVRPVNVTLSKLSDRMKNRLPTPIITKMPAIILAKPKDKVPDKEATKEKEKEAPPPKEKEKKVEDKKDEASATLTRKLSKDSSFGDDTVDSDAVSKSDANSVCDSTEKKSLASSSSPEKNRVFFHQGRKVPFLPKVRDRGKPPAFAGPNVNASAFSPENESSVYAFETEAETPLSTPFFRRKVRDSGLKHDQGAADNKEKHTTINKEKHTTVNKEMKEASAKEPELTGHLNSPVEARKDEEEPQQQKQQQAQQKSPPLLDRTTTPKSFELPKSFADLTNVQVLPLDKLTTSWSNVNYSASIAVQINLDEQKQQQQQQQQQQQQTAQQQQESTAEVESSASHKSTEISTQTDTNADNDDDDDNGQLFYIPLQAVTRNTSAQGGQQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPPISVARCPPIGTVQPTARTPQNTEQTDVPSTSNVDAAVANLKAVETLQKETKTVTSVGSKQIHKTSTTEKHIKSPKIKERRASIDSVKSGKKSQSKKPIEVVLPTNNTKFPKTKESNEEARLVDAPIFRPTEKEFQDPLEYIDKIRPIAEKFGICKVVPPSNFKPDCKVSDDMRFTAYNHYVHRMLNRWGPNVKELIAIKKYLATQSINLTQPPWIGGMEVDLPHLYQTVQTLGGLKEVIEKKRWQKVADGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQDERDKLFKDVEADWTRREKRDRQDSQSTDTEDDEEEDITEEIEECIVKGRNMPLNAFYRIARNTQRMWFGDNQRNETEGASADEVEVAFWKHVVEKKRHVCVHAASIDSGGRGFGFSVAKNSPFARHPWNLKILTNNAGSVLRALGPQMGVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEQNNTFRKALTKMFPRYCKNKTIWLPSDTAMVPPDMLVANGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPLWLETAEQVFRDIHDSCEPSIFSFERLLFSIINDSRSHIDVLKQILPTVIKVCNNEIENRKKLKELGLTNTEKLALPENEKKGKNKKVVEDEGDYECDTCRANLFVSLVSNPTDESIFCLTHGIQYIEKKKQVLKNCTLMYTYSESELNDLIHKLKNRIEAKSKKTNQTKHAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -