Gnig004242.2
Basic Information
- Insect
- Galeopsomyia nigrocyanea
- Gene Symbol
- Trpm
- Assembly
- GCA_035047105.1
- Location
- JAWWMK010000021.1:3280255-3319388[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.086 4.4e+02 2.5 0.0 36 54 563 582 559 603 0.80 2 2 1.7e-25 8.6e-22 78.5 0.0 2 89 918 1003 917 1003 0.96
Sequence Information
- Coding Sequence
- ATGGCAATTGGAAGTGTAATCTGTGGAGCTAACACTCCCAAAACCAAGCGAAAGAAAGTGaagACAACGGAACGAAGCTGGATCGAGGCAACCTTTCAAAAGCGAGAATGCACGAAATTCATCCCGAGCTCGAAGGATGTGGAACGGTTGGAAGAGGTTAAGGGCGATAAGAGTGCGGAATACGACGTGATCACTGACTCAAGTTGCTGCTGTGGTCACTCATACACCCATCATTGCGGCACGGGCGCCGACGTCGGCCTACACCACATCAGCGGAAACGTCCCCGATCGCGAGAGAGACGAATGGTGCCCCGGTAAAAATACCAAACAGAGTCCTACGGATGCCTACGGCACCATCGAATTCCAGGGCTTGCCGCATCCCACCAAAGCACAGTACGTAAGATTGGCCCATGACACAAAGCCCGAACCCATCGTCCAGCTGTTATGCCGAGAATGGAATTTGGGTCTGCCGAAACTCCTCATAACAGTTCACGGCGGACGCTCCAATTTCGAGCTGCAGCCGGCGCTGAAGAAAGTTTTGCGCAAGGGCTTGCTGAAAGCCGCCAAGACCACTGGAGCATGGATTTTTACCGGGGGAACCAATACTGgtGTAACAAGGCAAGTTGGAGATGCGCTGTTATTGGAGAGATCGCAGCGACAAGGCCGCGTTGTGAGCATCGGCATTGCACCTTGGGGTATCCTCGAGAAGAGCCACGAACTTGTTGGTCGAGGAAGAGAAGTTCCGTACGATTCGCTGGCCTCGCcctgGTCCAAGTACGCAGTATTGAACAACCGACACGCTTTTTTCCTGCTGGTCGATAACGGCACTGGAGGTCGATACGGTGCCGAAATCGTGCTCAGAAGGAAACTcgagaaatatatatcaaatttaaaactGCAGCCATACACGCACAGCAGTATACCAGTAGTCGCGTTAGTTATCGAAGGTGGCACAAACACAGTTCGCTCCGTTCTGGAATACGTGACGGACGAGCCACCCGTACCCGTAGTCGTTTGCGATGGCTCTGGACGTGCCGCCGACATCATTGCTTTCATGCAcaaATATGCCtccgaaaatgaaaatgacgaAGAAGAGGGACCACTCGAAAGCATGCGTGATCATTTGCTCGAAACCATCATGCGAACGTTCAAAGTATCGCCCGAACAGGCCAATCAATTGTATTCGGAATTGTTGCAATGCGTGCGCCGAAAACACTTGATAACAGTGTTCAGGATATCGCAGGATCAACCGCAAGAGCTCGATCAAACGATCCTCACGGCGCTGTTCAAGTCGCAGCAATTGACACCAGCGGAgcagctctcgctcgctttgaTTTGGAATCGCGTGGACATAGCTCGCAGCGAGATCTTCGTCTACGGGCAGAAGTGGCCGCCAGGTGCTCTCGAGCAATCAATGATGCAGGCGTTGCAACACGACCGCATCGACTTCGTCAAATTGCTGCTTGAGAACGGCGTGTCAATGCGCAAGTTCCTTTCGATACCGCGACTCGAGGAGCTCTACAACACCAAAGACGGTCCATCCAACACCCTCGGCTACATCCTCAGGGACGTTCGTCCGCACATCCCACGTGGCTACATGTACACTTTACACGACATCGGCCTTGTGATCAACAAACTGATGGGTGGCGCCTATCGCTCGCAGTACACTCGCAAGGAGTTTCGCTTCCTGTACACGCGAGTTATGAAACGTTCGGGTGGCTTCCAGCAGCATCACGCTCATCGCAATAGCTGTGCCATTGCACTGAACAATCGATCGTTTTCCGGCTCGGGTGGAAAATCCACCATGAGTCTGTTGGCCGAAACTATACCCGCCACTCAGGAAATCGCGCTCTTCGATTTCCCCTTCAATGAGTTGCTCATCTGGGCCGTACTCACGAAAAGACAACATATGGCATTGCTCATGTGGCAGCATGGTGAAGAGGCTTTGGCCAAGGCACTCGTCGCTCTGAAATTATACAAAGCGATGGCACACGAGGCTGCCGAGGATGATCTAGAGACTGAGGTTTACGACGAGCTCAAGGGATACGGCAGAGAGTTTGAGAATATCGCTTTGGAATTACTGGACTATTGCTATCGGCAAGACGATGACTTGACGCAACAGTTGCTAACGTCGGAACTGAAGAATTGGTCGGGACAAACGTGCCTTTCCCTTGCGGTGACGGCCAATCATCGTGCACTTCTCGCACACCCTTGCAGTCAAATTATATTGGCGGATCTATGGATGGGTGGACTGCGTACTCGCAAAAGCACCAACTTTAAGGTGATACTCGGGTTGTTCTTTCCGGTTTACGTAACTTATCTGGATTTCAAGAGCCGTGAAGAGCTGCAATTGATGCCGCAGACGGCAGAGGAGCACCTCATCGCGCTCGAGGACGAGAATGAGGACAGCGAGTCGGAGCAAGGAACCCCAGCTGGACCAGACGTCGAGAAACGGCCGGTTCGCAGGAGCCTGAGTATTCGCTACAAAGCCAGCAGCCAGCAAGGCGCCAAGGCTCTGATCGGCAGCGAACACGGTACAGCCGTGCCCAAGGAGACGATCGTCCACGAGAACGGCAAAGTGTTGACCGACAACGACGAGGGTAATCATCGCTCATACGGCATGCTGTCCGACTACTATGACAATAAGAACACTCGACAGCTAAGACTGAAGAAGAAACTCTACGAGTTCTACACCGCACCTATCGCCAAGTTCTGGGCCAATGCTCTGTACGAGATCAACGACGATCCCAAGAGGAAGGAGTTCCTGGACGATCTATTCAGTTACATGCAGAAACGAGgtacGCCGATCAACCGACTGCCGATAATGGCCAAATCAGTATTGGATCTGTACGAGCTGTACAATCTGGTGATAGCGCGCGGTGGCCTCGTCGACGTGATCAACAAAAAGCTCTGGCAGGAAATCATCAAAGGCCTTCATCTGCCGTCCAGCATCACCTCCGCGGCCTTCACGTTGCGCACCCAATACATGAAATACCTGTACCCATACGAGTGCGAGAAGAAGCACCTGTCGACGCCAGCGGAGCTGCAAGCGGCGATCGACGGCAACAGACGCGAGGGTCGTCGTAGCAATTACGCCGGTAGTTACGGCGGTGGCGCGGACTCGAGTCTGATACACCAGCGTAGTCCGCACACACCGAGTTCGTTGGCATCGTTGCACGCTCAAATCTCGCCGTTGTCGTTGGTCACAGCGGTTCAACAGGCAGCCGCGGCAGGTGGACAGCATCCAGTTAATCCGCAAAATCTCGTCAACGGTAGCGCCGCGCACACACCTCTGCCTCATCATCCCCATCATCCGCAGAGCTTGCAGGGTGGCATTGGACAACCTCAGAATGCTGGCGTAGCACCGGACTTCGAGGTACGCATGGCCGAGTACGTGAAGCACTTGCAGCGCGAGATGGACGCGAGACGACGAGCCGCCGCTTCTTCGCCCACCAGTGGATTGTTGAGTCAGccacagcaacaacagcatcGTTCGGGCAGCTCGTCACCACCGACGGAATCGCCGTCGCGCGAAGCTGCCCTCTTCGAGATGTCGCGTCTCACCCTCTGGAAcatgtacaataataatttacatccTGGATTAAACTACGCTCACAATATATCGCCACAGCACAGCCCACACTCGCCACCCGCTCATCCAGTCAGTCCTGAACCGCAAAAGGAAGCGCTTGATCTCGGACTCAGgtcATCGCCAAGCTCATCGTCACCACCCACCAGACAAAGTCCGCCGTCGTCGACGGCCGGAAGCATTGCCATAAAGCGCGAAGTCGAACGCTGCGAGTCGCTGCCCGAACCCTCGGCGAACAAGAGGCTGTGCATAGACGAGGACAGTCCCGCGGAAAATCACACGCCCGCGATGCCTGGTACACACATCAAGATCTCAAATCGAGGTGATGGTCGTGATAATTCAATGGTAGTCAGTATGGAAATAAACGGAGTGATGTACCAGGGTGTTCTATTCGCGCAAACGGACGGTAGGAATAGCATGGCCGCGTCGACCAACAATAACGAGGCGAAGACGTCGTCGCGCAACGTCATCTCGTGA
- Protein Sequence
- MAIGSVICGANTPKTKRKKVKTTERSWIEATFQKRECTKFIPSSKDVERLEEVKGDKSAEYDVITDSSCCCGHSYTHHCGTGADVGLHHISGNVPDRERDEWCPGKNTKQSPTDAYGTIEFQGLPHPTKAQYVRLAHDTKPEPIVQLLCREWNLGLPKLLITVHGGRSNFELQPALKKVLRKGLLKAAKTTGAWIFTGGTNTGVTRQVGDALLLERSQRQGRVVSIGIAPWGILEKSHELVGRGREVPYDSLASPWSKYAVLNNRHAFFLLVDNGTGGRYGAEIVLRRKLEKYISNLKLQPYTHSSIPVVALVIEGGTNTVRSVLEYVTDEPPVPVVVCDGSGRAADIIAFMHKYASENENDEEEGPLESMRDHLLETIMRTFKVSPEQANQLYSELLQCVRRKHLITVFRISQDQPQELDQTILTALFKSQQLTPAEQLSLALIWNRVDIARSEIFVYGQKWPPGALEQSMMQALQHDRIDFVKLLLENGVSMRKFLSIPRLEELYNTKDGPSNTLGYILRDVRPHIPRGYMYTLHDIGLVINKLMGGAYRSQYTRKEFRFLYTRVMKRSGGFQQHHAHRNSCAIALNNRSFSGSGGKSTMSLLAETIPATQEIALFDFPFNELLIWAVLTKRQHMALLMWQHGEEALAKALVALKLYKAMAHEAAEDDLETEVYDELKGYGREFENIALELLDYCYRQDDDLTQQLLTSELKNWSGQTCLSLAVTANHRALLAHPCSQIILADLWMGGLRTRKSTNFKVILGLFFPVYVTYLDFKSREELQLMPQTAEEHLIALEDENEDSESEQGTPAGPDVEKRPVRRSLSIRYKASSQQGAKALIGSEHGTAVPKETIVHENGKVLTDNDEGNHRSYGMLSDYYDNKNTRQLRLKKKLYEFYTAPIAKFWANALYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPAELQAAIDGNRREGRRSNYAGSYGGGADSSLIHQRSPHTPSSLASLHAQISPLSLVTAVQQAAAAGGQHPVNPQNLVNGSAAHTPLPHHPHHPQSLQGGIGQPQNAGVAPDFEVRMAEYVKHLQREMDARRRAAASSPTSGLLSQPQQQQHRSGSSSPPTESPSREAALFEMSRLTLWNMYNNNLHPGLNYAHNISPQHSPHSPPAHPVSPEPQKEALDLGLRSSPSSSSPPTRQSPPSSTAGSIAIKREVERCESLPEPSANKRLCIDEDSPAENHTPAMPGTHIKISNRGDGRDNSMVVSMEINGVMYQGVLFAQTDGRNSMAASTNNNEAKTSSRNVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -