Basic Information

Insect: Frieseomelitta varia
Gene Symbol: Prpf6
Assembly: GCA_011392965.1
Location: WNWW01000666.1:135008-141381[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.42 2.1e+03 -2.0 1.0 4 10 60 66 60 66 0.96

2 16 1.2e-07 0.0006 19.0 15.1 1 18 74 90 74 91 0.98

3 16 3e-08 0.00015 20.9 14.7 1 19 128 145 128 145 0.94

4 16 0.56 2.9e+03 -2.4 0.3 5 10 169 174 169 176 0.90

5 16 0.011 58 3.1 10.3 1 19 180 199 174 199 0.89

6 16 0.00016 0.83 8.9 9.4 1 18 235 252 235 253 0.98

7 16 0.003 15 4.9 8.3 1 12 287 298 287 298 0.94

8 16 2 1e+04 -4.4 1.7 6 10 308 312 308 312 0.97

9 16 1.6e-07 0.00083 18.5 12.0 1 18 318 335 318 336 0.92

10 16 0.0052 26 4.2 9.0 9 19 383 393 381 393 0.90

11 16 0.0053 27 4.1 6.2 1 12 403 413 403 413 0.95

12 16 1.3 6.6e+03 -3.5 5.8 14 19 445 450 445 450 0.90

13 16 0.0032 16 4.8 7.9 1 12 486 497 476 497 0.80

14 16 0.00086 4.4 6.6 13.1 3 19 526 542 525 542 0.94

15 16 1.3e-05 0.065 12.5 12.8 1 16 598 612 598 618 0.86

16 16 0.3 1.5e+03 -1.5 0.1 4 7 1227 1230 1226 1232 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.42	2.1e+03	-2.0	1.0	4	10	60	66	60	66	0.96
2	16	1.2e-07	0.0006	19.0	15.1	1	18	74	90	74	91	0.98
3	16	3e-08	0.00015	20.9	14.7	1	19	128	145	128	145	0.94
4	16	0.56	2.9e+03	-2.4	0.3	5	10	169	174	169	176	0.90
5	16	0.011	58	3.1	10.3	1	19	180	199	174	199	0.89
6	16	0.00016	0.83	8.9	9.4	1	18	235	252	235	253	0.98
7	16	0.003	15	4.9	8.3	1	12	287	298	287	298	0.94
8	16	2	1e+04	-4.4	1.7	6	10	308	312	308	312	0.97
9	16	1.6e-07	0.00083	18.5	12.0	1	18	318	335	318	336	0.92
10	16	0.0052	26	4.2	9.0	9	19	383	393	381	393	0.90
11	16	0.0053	27	4.1	6.2	1	12	403	413	403	413	0.95
12	16	1.3	6.6e+03	-3.5	5.8	14	19	445	450	445	450	0.90
13	16	0.0032	16	4.8	7.9	1	12	486	497	476	497	0.80
14	16	0.00086	4.4	6.6	13.1	3	19	526	542	525	542	0.94
15	16	1.3e-05	0.065	12.5	12.8	1	16	598	612	598	618	0.86
16	16	0.3	1.5e+03	-1.5	0.1	4	7	1227	1230	1226	1232	0.82

Sequence Information

Coding Sequence: atgtcTCAGTCAATTCgtgttaatattatagatttggAATTGCAACAAATGTTTTGCTTTTCTACATCTGTCTTTCCAAAATGTCGTATGGAATACAAGGAAGATGACAGTCCTCGTAAGTATAAGTGCTTCTGCAAAAAAACCATAGATCCTCTATACAGCCCATGGAACATCCCTCATTCCTGTGGAGAGACATGCGACAAACTGTTGCAACCAGAGTGCGGTCATAAATGTGTTTTACTTTGTCATCCTGGGCCATGTCCTCCCTGCGCAAAGACAGTATCCTTTAAATGCTACTGTGGCAAACAAGCACCTCAACAACGACGATGTAACGCCAAAAATTGGAGCTGCGGCACTGTATGTAACAAAAAGTATGAATCATGTTCGCACACTTGTAAAGAAGTGTGTCATTCAGGGAAGTGCCCACCTTGTTCAGAGATATTGTCGTTAGAATGCCACTGCAAGAGTAACAAGGAATTAAAGCAATGCTCAGAAGGTCCATGGACGTGCGACAAACCTTGTGGCAGAACTTTCTCTTGCAATGTTCACACCTGCGAAGGTAAATGCCATTTAGACGACGACTGCGGAATCTGTCCACTGGAGAAAAACAGAACATGTCCATGTGGAAAGAAACGTTACGCCGTTTCATGCAACCAGGAACAATTACCAACGTGCGGAGACACATGTGGAAAGTTATTGAATTGCGGCTCGCATTACTGCAGTATGAGATGTCATACGGATCGTTGTGGACAGTGTGTGGAAGTAGTCACAAAGTGGTGTAGATGCGGCAGTTACAAAAAGGAGGTCGCTTGTGGCAAAGAGTTCCATTGCAACAAAAAATGCGTGCAGATGCGTTTGTGCGGAAGGCATTCCTGCAACAAAAAATGCTGCGACTGTTTGATCAAGAATACGTACAATGTTTGCGAGAAAGTATGCGACAACACTCTAAATTGTCGCAAGCACAAATGTGCCGCCCCTTGTCACAGCGGTCCCTGTTACCCGTGCGCACGAACCGACGTTATTCAATGTAGATGCGGACACAGCAAAATAACGGTGCCGTGTGGTACGAAAAGAATCAAGCCGCCACCTTGCAACAGGCCGTGCAAAATACCGCCGATCTGCCATCACCTTAAACGAGAAACTCATAAATGTCACCACGGCTACTGTCCGCCCTGCAAAAAGACATGTGACTTGGTATACAAACGATGTGGTCATTCTTGTGTGGCTGTTTGTCATACAAAAGTTTGGATGAAGGTAAGCAAAAGTGACGTGAAGGTACAACCAACAGGGCCGTGGGATATTCAGAAGGAAATTATGCAGTTGAAAACGTTGCCATGTCCGCCGTGTAAAGTCTCTGTGCCAATTACATGCTTAGGAGGACACGAGACACGTCCGTGGGCCTGTCACGAGGCCAAGCCTACCTCCTGTGGGAGATTGTGTGGAAGAATGTTACCGTGCAAAAATCACACGTGCGAATTGATTTGTCATAAAGTACCGTCTTCCGAAGAAACTAGGAATGGCATTCCGTGTATGGACTGTGAGAGTTCCTGTCTACTTCCACGGCCGGCAGGTTGCATTCATTTATGCCCCAAACTTTGTCATCCCGCGCCGTGTAATCCCTGCAAGCAGATAGTTAAAACTTCGTGTCACTGCGGCATAAGTACCATATATCGTAGATGCTTCGAATTAACGTCGGCCACAGCTGAGAAACGCAATGAATTGCTCAAGTGTGGGAATCAGTGCCCTAAAAATGTAACTAAATACTTAGATAAATATCAACTAGTATATCCATGTGGACATCGATGCGCCAACGAGTGTCACCCAGGACCGTGTAAAAATGAGAAGGAGTGCAGCAAGAAGATGAAGTTGTTTTGCGAGTGCAGACGGattaagaaagaatttatttgctCTGTGGTGCAGAAGGAGGGAATTTCGATAAAGTGCGACGATGTTTGCACGAGACTGAAGAACGAAAGACGCCAGGCCGAAGCTGCCTTGCTGGAGCAAAAACGGCGAGCGGAGGAGATGCGCAATCAACAAGAGATAGAAAAGTTCGAGCGAAAGTTCAAACCCCGTCGTAAGGGGAAAGATAAATCCGACAAGAAAATGTCGCAGAACGAGATGCGCGTTTATCTTCCTTTAGCCCGCCAACTGATTCAAAACGTGACCACCTCTGAGGTGCCATCTAGCTTCGAGAAATCACTACTTGAGAGaatattaatatacggCGTTAATGCCTTATCTTTTAGAGCTACTGGATTCACAACCAGATCTGACATTGGTCCAGCTCGCGATGCCAACGATGTTTCGGATGACAGACACGCTCCGCCTACGAAAAggacaaagaagaaagaagaggaggaagaagacgaGGAAGATTTGAACGATTCTAATTACGATGAATTTTCCGGATATGGAGGATCTCTGTTCAGCAAAGATCCTTATGACAAAGACGATGAAGAGGCCGATGCTATTTACGAGGCAATTGACAAACGAATGGATGAAAAGCGCAAAGAATACAGGGAAAAGAGGCTGAGAGAAGAGTTGGAAAGGTATCGTCAAGAACGTCCTAAAATTCAGCAACAGTTCTCAGACTTGAAGAGGGAATTGGTAAATGTAACCGAGGaagaatggaaaaatgttCCAGAAGTTGGCGACGCTAGAAATAGGAAGCAACGAAATCCTCGGGCAGAGAAGTTCACGCCACTGCCGGACTCGGTTCTCGCGCGGAACTTGGGAGGCGAAACGTCAACCAGCATAGATCCGTCGAGTGGTTTGGCGTCGATGATGCCAGGTGTGGCAACACCTGGGATGTTGACGCCGACAGGAGACTtagatttaagaaaaattggtCAGGCTAGAAACACTTTAATGAACGTTAAATTGAATCAGGTCTCCGACTCTGTCGAAGGACAGACTGTCGTAGATCCCAAAGGTTATCTTACCGACTTGCAGAGTATGATACCAACGTACGGCGGTGACATCAAcgATATCAAGAAAGCCAGATTGTTGTTAAAATCCGTGAGGGAGACGAATCCCAATCATCCACCAGCGTGGATCGCTTCTGCTCGTTTGGAAGAGGTCACTGGGAAAGTGCAGGCAGCTcggaatttaataatgaaaggCTGCGAAGTGAACCCTACGTCGGAAGATCTATGGTTGGAAGCGGCCAGGCTGCAACCGCCAGACACAGCTAAAGCGGTGATCGCTCAATCGGTACGGCATATACCAACATCCGTTCGAATATGGATAAAAGCAGCGGATTTGGAAATCGAGACGAAAGCAAAGAGAAGAGTGTACCGCAAAGCATTGGAGCATATTCCGAATTCAGTGAGACTGTGGAAAGCTGCAGTGGAGTTGGAAGAACCGGAAGACGCGCGAATTTTGCTCAGCCGGGCAGTCGAGTGTTGCCCAACCAGCGTTGACTTGTGGCTTGCTCTCGCTCGATTAGAAACCTATGACAATGCCAGAAAAGTTCTTAACAAAGCAAGAGAAAATATCCCAACGGATAGGCAAATTTGGACAACAGCCGCAAAGTTGGAAGAGGCGAACGGAAATAAACATATGGTGGAGAAAATCATCGATCGCGCAATATCTTCTTTGAGCGCGAACGGGGTGGAAATCAATAGAGAACATTGGTTTAAAGAAGCTATGGAGGCTGAAAAGGCTGGGGCAGTGCATACCTGTCAGGTTATTGTTAAGGCGATCATTAGTTTTGGAGTGGAGGAAGAGGACAGGAAACATACATGGATGGAAGACGCAGAAACATGCGCTCAACAAGGGGCATTGGAATGTGCTAGAGCAGTCTATGCTTATGCGTTATCGACGTTCCCCAGTAAAAAGTCAATTTGGCTGCGCGCAGCTTACTTTGAGAAAACTTATGGCACGCGAGAGTCTTTGGAGTCTTTACTTCAAAGAGCGGTTGCCCACTGTCCGAAGAGCGAAGTACTTTGGCTCATGGGTGCAAAGTCGAAGTGGTTGGCTGGAGACGTCCCAGCAGCGAGAGGTATTTTATCACTTGCGTTTCAAGCGAATCCAAATTCCGAAGAGATTTGGCTAGCAGCTGTGAAGCTGGAATCAGAGAATTCCGAATACGAGAGAGCTAGACGATTGCTCGCGAAAGCAAGAGCGTCTGCACCAACTCCTAGAGTGATGATGAAAAGCGCGAAATTGGAATGGGCTTTGAACAACCTCGACGCGGCGTTACTGCTTCTGAAAGAAGCTCTAGAAGCATTCGATGATTTCCCGAAACTGTGGCTAATGAAGGGACAAATCGAAGAACAACAAGGGAATTTAGACAAAGCTTTAGACACATACAATCAAGCTATCAAAAAATGTCCCAATTCTATACCACTGTGGCGTTTACTGGCACAGTTGGAGCACAGAAAGGGTCAAGTTACCAAAGCCAGATCGGTGTTGGAGAAGGCTCGgttaaagaatttaaagaacCCAGAGCTTTGGTTGGAAGCTAtcagaaatgaattaaaagttGGCGGTGTCAGAGACATGGCAAACACACTCATGGCGAAAGCGCTTCAGGAATGTCCAACATCTGGCTTGCTTTGGGCAGAGGCGATCTTTATGGAACCTCGGCCacaaagaaagacaaaaagtGTCGATGCTTTGAAAAAGTGCGAGCACGATCCACACGTGCTTCTTGCAGTATCCAAATTATTCTGGTGTgagcataaaatttcgaagTGTCGGGACTGGTTCAATCGTACGGTGAAAATAGATCCAGACTTGGGAGATGCGTGGGCATATTTTTACAAGTTCGAACTTTTAAACGGAACGGAGGAGCAGCAAGAAGACGTGAAGAAAAGATGCATCGCCGCAGAACCTCACCATGGTGAAAATTGGTGCAAAGTATCAAAGAATATAGCAAACTGGTGTCTAAGTACCGATCAAATCTTAGTATTAGTTGCAAAAGATTTGCCAAttccaatataa
Protein Sequence: MSQSIRVNIIDLELQQMFCFSTSVFPKCRMEYKEDDSPRKYKCFCKKTIDPLYSPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSFKCYCGKQAPQQRRCNAKNWSCGTVCNKKYESCSHTCKEVCHSGKCPPCSEILSLECHCKSNKELKQCSEGPWTCDKPCGRTFSCNVHTCEGKCHLDDDCGICPLEKNRTCPCGKKRYAVSCNQEQLPTCGDTCGKLLNCGSHYCSMRCHTDRCGQCVEVVTKWCRCGSYKKEVACGKEFHCNKKCVQMRLCGRHSCNKKCCDCLIKNTYNVCEKVCDNTLNCRKHKCAAPCHSGPCYPCARTDVIQCRCGHSKITVPCGTKRIKPPPCNRPCKIPPICHHLKRETHKCHHGYCPPCKKTCDLVYKRCGHSCVAVCHTKVWMKVSKSDVKVQPTGPWDIQKEIMQLKTLPCPPCKVSVPITCLGGHETRPWACHEAKPTSCGRLCGRMLPCKNHTCELICHKVPSSEETRNGIPCMDCESSCLLPRPAGCIHLCPKLCHPAPCNPCKQIVKTSCHCGISTIYRRCFELTSATAEKRNELLKCGNQCPKNVTKYLDKYQLVYPCGHRCANECHPGPCKNEKECSKKMKLFCECRRIKKEFICSVVQKEGISIKCDDVCTRLKNERRQAEAALLEQKRRAEEMRNQQEIEKFERKFKPRRKGKDKSDKKMSQNEMRVYLPLARQLIQNVTTSEVPSSFEKSLLERILIYGVNALSFRATGFTTRSDIGPARDANDVSDDRHAPPTKRTKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRKEYREKRLREELERYRQERPKIQQQFSDLKRELVNVTEEEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLARNLGGETSTSIDPSSGLASMMPGVATPGMLTPTGDLDLRKIGQARNTLMNVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLEIETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCPTSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAISSLSANGVEINREHWFKEAMEAEKAGAVHTCQVIVKAIISFGVEEEDRKHTWMEDAETCAQQGALECARAVYAYALSTFPSKKSIWLRAAYFEKTYGTRESLESLLQRAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNLDKALDTYNQAIKKCPNSIPLWRLLAQLEHRKGQVTKARSVLEKARLKNLKNPELWLEAIRNELKVGGVRDMANTLMAKALQECPTSGLLWAEAIFMEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEDVKKRCIAAEPHHGENWCKVSKNIANWCLSTDQILVLVAKDLPIPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01424730;
90% Identity: -
80% Identity: -