Fvar009313.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- pnr
- Assembly
- GCA_011392965.1
- Location
- WNWW01000448.1:253299-282213[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-18 4.7e-15 54.1 3.2 1 34 212 244 212 246 0.97 2 2 3.5e-19 7.1e-16 56.7 6.2 1 35 266 299 266 300 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCAGCGGCTACGGCGCGAGTTCCGACTaccaacagcagcagcaacaacaacagtctcagcagcagcagcagcagcaacaacaacaacagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcaacaacacgGTCAACAACTTCAAGCGCCCGTTTACGTACCGTCCTCGAGGCCGACGATCCCATCGGCGGCGACGGCTGCTGCGGCCGCCgcggccgccgccgccgctcaGTACCACTCGTTCCCCGGCTCCGGCTCCCCGACTTGGGAGAAGACCGCGGCAGCGGCGGCCTCGTGGCAGCATGGGGTCGAGACGTACGCCGCCCACCACGCTCTCGCTGGCCACGCGAGCGGATCCGCGGCCGCGGCCGCGGCTGCTGCAGCCGCCATGGGTCAACACTCGGGTCATCCTCACCCTCACCCGCATCCGCACGCGGCACATCCGCACACCGGACACCATCACTCCAGCCTCGCCGCCGCCGCTCCGTTTTACGCCCAAAACGTCGCCATGATGTCCTCCTGGCGCGCCTACGACGGAGCCGGCTTCCAACGAGCCTCCCCTTACGACACAGCGATGGACTTTCAATTCGGCGAGGGTCGCGAGTGCGTCAACTGCGGGGCTATATCGACGCCACTTTGGAGGAGAGACGGCACCGGGCATTATCTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGAATGAACAGACCCCTGATAAAGCCCTCGAAACGGCTGACAGCGACCAGACGTCTGGGCCTGTGCTGCACGAATTGCGGGACCCGCACCACCACCCTCTGGAGGCGCAACAACGAGGGCGAGCCGGTGTGCAACGCTTGCGGCCTCTACTTCAAGCTGCACGGCGTCAACAGACCTCTCGCGATGCGCAAGGACGGCATTCAGACGCGGAAACGCAAGCCGAAGAAGACGCCCGAGCCGAATGCCAGATCGTCGTCCACCGTCGACCACGAGACCACCGCCGTGTCCGCCGCATCCTCTCCGTCCACCGCGACCAGCGAGCATCAACAGCAGACCTACTACGGAAGTAGCCAGGAGGCGCCGTATCATCATCAGCATCACGTTACCGCGGCCGCCAAGTTACTCGCCTCTACGTAA
- Protein Sequence
- MFHGGGSSGYGASSDYQQQQQQQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAAAAAAQYHSFPGSGSPTWEKTAAAAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAMGQHSGHPHPHPHPHAAHPHTGHHHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSSSTVDHETTAVSAASSPSTATSEHQQQTYYGSSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -