Basic Information

Insect: Frieseomelitta varia
Gene Symbol: slc38a11
Assembly: GCA_011392965.1
Location: WNWW01000433.1:353101-366720[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00039 0.024 14.3 0.4 2 23 692 713 691 713 0.95

2 11 0.0044 0.27 11.0 0.9 1 23 721 744 721 744 0.95

3 11 0.0002 0.012 15.2 2.3 1 23 800 822 800 822 0.98

4 11 2.2e-06 0.00013 21.4 1.5 2 23 872 893 871 893 0.97

5 11 2e-05 0.0012 18.4 0.8 1 23 898 921 898 921 0.96

6 11 5.4e-06 0.00034 20.1 0.3 1 23 958 980 958 980 0.98

7 11 9.2e-07 5.7e-05 22.6 0.9 1 23 990 1012 990 1012 0.96

8 11 2.6e-06 0.00016 21.1 1.2 1 23 1018 1040 1018 1040 0.99

9 11 1.3e-05 0.00081 18.9 0.2 1 23 1046 1068 1046 1068 0.98

10 11 9.9e-05 0.0062 16.2 4.6 1 23 1074 1096 1074 1096 0.98

11 11 0.00039 0.024 14.3 0.4 1 21 1102 1122 1102 1123 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00039	0.024	14.3	0.4	2	23	692	713	691	713	0.95
2	11	0.0044	0.27	11.0	0.9	1	23	721	744	721	744	0.95
3	11	0.0002	0.012	15.2	2.3	1	23	800	822	800	822	0.98
4	11	2.2e-06	0.00013	21.4	1.5	2	23	872	893	871	893	0.97
5	11	2e-05	0.0012	18.4	0.8	1	23	898	921	898	921	0.96
6	11	5.4e-06	0.00034	20.1	0.3	1	23	958	980	958	980	0.98
7	11	9.2e-07	5.7e-05	22.6	0.9	1	23	990	1012	990	1012	0.96
8	11	2.6e-06	0.00016	21.1	1.2	1	23	1018	1040	1018	1040	0.99
9	11	1.3e-05	0.00081	18.9	0.2	1	23	1046	1068	1046	1068	0.98
10	11	9.9e-05	0.0062	16.2	4.6	1	23	1074	1096	1074	1096	0.98
11	11	0.00039	0.024	14.3	0.4	1	21	1102	1122	1102	1123	0.94

Sequence Information

Coding Sequence: ATGAACACTgaaaagaaggaagaatcTGGAAAATTCAGTAGCCTACCCCTGGCcagttttaatttcatcaattccATTATTGGCAGTGGTGTTATTGGTATACCCTATGCTCTTCATCAGGCTGGATTCGGCCTCGggatagtattattaatactggTAGCTGGACTCACTGATtactctttaattttaatgattagGAGTGGAAACATTTGCGGTGAAATGAGCTACCAGGGTTTAATGAGAGCCAGTTTCGGTCGTACAGGATTTTATATTCTCACGACactacaatttatttatccatTCATAGCAATGGTCTCTTATAACGTTGTCGTTGGCGACACGGTGACGAAAGTGTTAATAAGGGTAACAGGGATAAGCGAGACGAACATTTTTGCTCATCGTCAAGTGGTCGTCTTATTCGCGACGGTTTGCATCACTATACCGCTGTGTCTTTATAGAAATGTTGCTCGTTTGGCCAAGATCTCATTCCTTTCGTTGGTCTGCGTTGGTTTCATTCTCCTAACGATTTTAATCCGGATGGGTACGATGTCAGCGATTGTGCCAAGCCAGGAAGATAGTTGGCGATTCGCAAATTTCCCCGGCATAGTTCCATCCGTTGGAATTATGGCATTCGCCTTTATGTGCCATCATAATACATTCCTTATCTACGAGTCTATAGAAAGGGCTACTCAACAAAAATGGGACATCGTCACCCATTGGTCACTTTTCACTTCCTTCCTGATTGCGGCAGCTTTTGGAATCATCGGATATGCCACGTTTACTGCGTACGTCCAGGGTGATCTTATGGAGAATTATTGTTGGGACGATGATCTGATGAACTTCGCCAGAGTTATGTTCAGCGGGActattttacttacttttcCTATCGAATGCTTCGTCACGAGAGAGgTAATAATGACAGCGATCAAAGGAACCGACGAGCTCGAAGATCATACGGCATATGTTCCTAACTCCGATCGGAAGTACTTGATAATTACGCTGACGATAGTGGTGGTTGCATACCTGATCTCGATGTCCACGGATTGTCTCGGCGTGGTTCTCGAACTGAACGGAATCCTCGCTGCTGTACCTTTAGCCTATGTTCTTCCTGGGCTGTGTTACCTCAAACTCGAAGATGGACCAGTTCTCTCCTCGAAGAAGCTCCCGGCGCTGGGATTGATGTCCGCTGGTGTGTTCGCCGCGGTCTCTGGCCTGCTGTTGTTGATCCTGAACAACGACACTTCCGGTTCCTGCGTGCACGGAAAGGAGGGGAGTTCGAGTCGCAGCTTGATTCCCAAATGCATTAAGATGGAAGTTTCAAAAAACGAGCAATTAGTTGATACATATGAGAAAATTTATGGAGACGAATGTCGAATCTGTTTGAAAAGGGCTGTTGAAATTTGTGAACTTTTTAGAAATGGGGACACTATTCCTCGAAAACTTATGGCCGTTGCTTCTGTACAGGTTGTAGAAGGAGATGGTTTACCACCAGTGATCTGTTTGCCTTGTAATCAGCGTTTAGATGCATCCTAtgattttaaatgtcaaatACAAAATTCAGATGAAAAACTTCGTCAAATTCTAAAGCTGAAATCATCTTCCAATGATTCTGTTACCAGCGCCAGTATAGTTACAGCAATAATTGCTGATGTGATATCTAGTGTAATATCTtctgagaaagaaaatacagaaaaacaAGAAGTTTgttctacaaatttttgtcctgataatttttgtttcacgaaAGATGAAACTTCTTTCTGTCTCAAttcagagaaaaatttattttgttatgaaAAAGAATCACAGAgtgaattaaatgatataGAACAAAGAAAGAACCTAGAAGAtgcaaatgtttataaaagtttattagaGGATGATTCTGTAAGGCAAATCAGTTCAATGAAACAAGAGTTTGCTTTATTGGATGATCATATGATACAAACTaaagatatttcattaaaggaagaagaaagtattGAAGAAAATCAACAAATAGAAGAGACATCAAAGATAGATAATATTCAAGATGATGAAGAAAAACCATTAATTTCACGCACAACTAGATTACGTTGTACACAATGTATTAAGTCTTTTCGTACAAAAGTGGCCTTGCAGAGACATGCCATTGTACATAAACGTAAAACTAAATTACGTTATGTTTGTTATGTTTGTGATAAACAATATTCTActcttgcaaaagtaaaaaatcatGTTGCAATCTGTCATGAAGCTCatgatagaaaagaaaatattcaacataAGAGAATTAATTATGAGCAAAATAAAGCAATAACGAGTGTACAAGATAAAAGAATTAGTAATGTTCAAgacaagaaaataaaaattcagaaaactgATGATTCTTCTAAAGAACAACGAAAAAGCCTAAAATTTACTTGTGAAGTTTGTTCAAAGCAATTTACATatcaaaaatcttttattacaCACGCTAAAAGTCATCCAGAGTATAAGTTTGAAGAATTGGATGATTCTTCCGAATGTTCAACAAAAGAAAGATCTACAGAAACtattgaagaagaagaagaaaatgaagaagaggaagatgaAGAGGATGAGGAAGATGAGAATCTTCCAGCTGAAAGTTTACAATGCACTCAAtgtggaaaattatttgcaacaaaaagaaatctcaAGAGGCATGTTTCTACACATAGTGGATTAAAGTATACGTGTGAAACGTGTGGCAAAGGATTTTCAAGAGTGGATAAATTGAAAGATCATGAACAATCAAAACATAAGgctgaattatttgaaaattctgatTTGGACGATAAAGAAGATATggacaatataaataaaggagACTGTttagaaggaaaaaagaaaGATCGTCACAACAGACCTCATAAATGTGCAATTTGCCCTAAATCATTTGCACAAGCTCAATCACTAGCGAATCACATAGAACGTCATAAACGGGTGAAAGAAACTCAAAAAAGATTTCTTTGTGAAGTCTGCAGTAAGTGTTTTGCACAGAGTGGTTCTTTGGTTGCTCATATGCGTACACATACTGGAGTTAAACCATACGTTTGTAACGTATGTAGTAGAGCTTTTACAAAGAGCacttatttacaattacatttgcGCACTCATAGCGGAGAAAAACCTTATATTTGTCAGTATTGTAGTAGGGCCTTTGCGCGTGCTAATACATTAGCAAGGCACATAACAATGCATACAGGAGAAGCAAAATATCATTGTCAGATTTGTACAAAATCATTTAGAAGACTGACTTCGTTAAATGAACATACTTACACACATACTGGACAAAGACCATATGcgtgtaaaatttgtacaaagaGATACAATAATGCTGGATCACTTTATGCACATAGAAAGAAGTGCAAGGCACAGCAGCTATCTAATCCTGGATTTGCTGTTTCTGTGGAAAATACTGTATCACAACAAGAAGTAGATGTTCCGCAAGTTTTGATTTATTCACACAGGAAACTAGTAGAGGATGCAACTGTTGGGCAAGTTACGCCCACGCCACAGTATATGATCGCAAACGTACATAATCAAAAGAATTTGggatcaaatattatacagtcATTTCCAGTGGATGATCCAAATGTTTATACGAAGCCATTTAAGAACCcctattatacaatttatccaaatatgtaa
Protein Sequence: MNTEKKEESGKFSSLPLASFNFINSIIGSGVIGIPYALHQAGFGLGIVLLILVAGLTDYSLILMIRSGNICGEMSYQGLMRASFGRTGFYILTTLQFIYPFIAMVSYNVVVGDTVTKVLIRVTGISETNIFAHRQVVVLFATVCITIPLCLYRNVARLAKISFLSLVCVGFILLTILIRMGTMSAIVPSQEDSWRFANFPGIVPSVGIMAFAFMCHHNTFLIYESIERATQQKWDIVTHWSLFTSFLIAAAFGIIGYATFTAYVQGDLMENYCWDDDLMNFARVMFSGTILLTFPIECFVTREVIMTAIKGTDELEDHTAYVPNSDRKYLIITLTIVVVAYLISMSTDCLGVVLELNGILAAVPLAYVLPGLCYLKLEDGPVLSSKKLPALGLMSAGVFAAVSGLLLLILNNDTSGSCVHGKEGSSSRSLIPKCIKMEVSKNEQLVDTYEKIYGDECRICLKRAVEICELFRNGDTIPRKLMAVASVQVVEGDGLPPVICLPCNQRLDASYDFKCQIQNSDEKLRQILKLKSSSNDSVTSASIVTAIIADVISSVISSEKENTEKQEVCSTNFCPDNFCFTKDETSFCLNSEKNLFCYEKESQSELNDIEQRKNLEDANVYKSLLEDDSVRQISSMKQEFALLDDHMIQTKDISLKEEESIEENQQIEETSKIDNIQDDEEKPLISRTTRLRCTQCIKSFRTKVALQRHAIVHKRKTKLRYVCYVCDKQYSTLAKVKNHVAICHEAHDRKENIQHKRINYEQNKAITSVQDKRISNVQDKKIKIQKTDDSSKEQRKSLKFTCEVCSKQFTYQKSFITHAKSHPEYKFEELDDSSECSTKERSTETIEEEEENEEEEDEEDEEDENLPAESLQCTQCGKLFATKRNLKRHVSTHSGLKYTCETCGKGFSRVDKLKDHEQSKHKAELFENSDLDDKEDMDNINKGDCLEGKKKDRHNRPHKCAICPKSFAQAQSLANHIERHKRVKETQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICTKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHRKKCKAQQLSNPGFAVSVENTVSQQEVDVPQVLIYSHRKLVEDATVGQVTPTPQYMIANVHNQKNLGSNIIQSFPVDDPNVYTKPFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00966156;
90% Identity: iTF_00233379;
80% Identity: -