Basic Information

Insect: Frieseomelitta varia
Gene Symbol: ZNF236
Assembly: GCA_011392965.1
Location: WNWW01000850.1:76446-84735[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0024 0.15 11.8 1.8 2 23 182 203 181 203 0.96

2 24 0.38 23 4.9 0.7 1 23 209 232 209 232 0.83

3 24 2.4e-06 0.00015 21.3 0.4 2 23 238 259 238 259 0.97

4 24 0.0062 0.39 10.5 0.3 3 23 267 287 265 287 0.96

5 24 5.1e-05 0.0032 17.1 0.9 2 23 298 319 298 319 0.98

6 24 5.6e-07 3.5e-05 23.2 1.1 1 23 338 360 338 360 0.99

7 24 2.4e-06 0.00015 21.3 0.7 1 20 366 385 366 388 0.95

8 24 2.1e-05 0.0013 18.3 0.7 1 23 394 417 394 417 0.95

9 24 0.012 0.73 9.6 1.8 3 23 428 449 426 449 0.96

10 24 1.4e-06 8.8e-05 22.0 2.1 1 23 561 583 561 583 0.98

11 24 0.12 7.5 6.5 7.6 1 21 696 716 696 718 0.95

12 24 2.6e-05 0.0016 18.0 5.1 1 23 724 746 724 746 0.99

13 24 0.00014 0.0086 15.7 0.8 3 23 754 774 753 774 0.98

14 24 0.014 0.88 9.4 1.4 1 12 780 791 780 794 0.89

15 24 1.8 1.1e+02 2.8 1.3 2 23 1196 1217 1195 1217 0.94

16 24 0.00053 0.033 13.9 1.3 1 23 1223 1245 1223 1245 0.98

17 24 0.0017 0.11 12.3 1.4 2 23 1252 1273 1251 1273 0.96

18 24 7.8e-08 4.8e-06 25.9 1.4 2 23 1353 1374 1352 1374 0.98

19 24 0.00055 0.034 13.8 3.5 1 23 1380 1402 1380 1402 0.99

20 24 7.1e-05 0.0044 16.6 1.9 1 23 1408 1430 1408 1430 0.98

21 24 0.00041 0.025 14.2 2.2 1 23 1436 1458 1436 1458 0.98

22 24 2.1e-06 0.00013 21.5 0.6 2 23 1682 1703 1681 1703 0.97

23 24 1e-05 0.00062 19.3 4.5 1 23 1709 1731 1709 1731 0.98

24 24 6e-07 3.7e-05 23.2 0.7 1 23 1737 1760 1737 1760 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0024	0.15	11.8	1.8	2	23	182	203	181	203	0.96
2	24	0.38	23	4.9	0.7	1	23	209	232	209	232	0.83
3	24	2.4e-06	0.00015	21.3	0.4	2	23	238	259	238	259	0.97
4	24	0.0062	0.39	10.5	0.3	3	23	267	287	265	287	0.96
5	24	5.1e-05	0.0032	17.1	0.9	2	23	298	319	298	319	0.98
6	24	5.6e-07	3.5e-05	23.2	1.1	1	23	338	360	338	360	0.99
7	24	2.4e-06	0.00015	21.3	0.7	1	20	366	385	366	388	0.95
8	24	2.1e-05	0.0013	18.3	0.7	1	23	394	417	394	417	0.95
9	24	0.012	0.73	9.6	1.8	3	23	428	449	426	449	0.96
10	24	1.4e-06	8.8e-05	22.0	2.1	1	23	561	583	561	583	0.98
11	24	0.12	7.5	6.5	7.6	1	21	696	716	696	718	0.95
12	24	2.6e-05	0.0016	18.0	5.1	1	23	724	746	724	746	0.99
13	24	0.00014	0.0086	15.7	0.8	3	23	754	774	753	774	0.98
14	24	0.014	0.88	9.4	1.4	1	12	780	791	780	794	0.89
15	24	1.8	1.1e+02	2.8	1.3	2	23	1196	1217	1195	1217	0.94
16	24	0.00053	0.033	13.9	1.3	1	23	1223	1245	1223	1245	0.98
17	24	0.0017	0.11	12.3	1.4	2	23	1252	1273	1251	1273	0.96
18	24	7.8e-08	4.8e-06	25.9	1.4	2	23	1353	1374	1352	1374	0.98
19	24	0.00055	0.034	13.8	3.5	1	23	1380	1402	1380	1402	0.99
20	24	7.1e-05	0.0044	16.6	1.9	1	23	1408	1430	1408	1430	0.98
21	24	0.00041	0.025	14.2	2.2	1	23	1436	1458	1436	1458	0.98
22	24	2.1e-06	0.00013	21.5	0.6	2	23	1682	1703	1681	1703	0.97
23	24	1e-05	0.00062	19.3	4.5	1	23	1709	1731	1709	1731	0.98
24	24	6e-07	3.7e-05	23.2	0.7	1	23	1737	1760	1737	1760	0.97

Sequence Information

Coding Sequence: atggaGAAAATGTTGACGCGACAGAATGTGGTCACAGAATCTCCACATGTCGAAACAATACCTATAAATTTTGTTGCTACTGAGGATGGTCGAACGCTGTTAGCATTGACTGAACATAAAGACGATATGTTGGAAATTGTTGCAACTCCAGTCATGCTTGTTGGACAAAGTGGAACAGCCACGTCATTGAtagatgtaaaaaatttaaatggaaatttaatattacattcgCCTGTTTTTCAAATAAGCGTGGAAAATATTGTCAATGAGTCAGAACTACAACAGTCGACGCAAATTTTGGAACCAGAATCATTCAATGACGTTGATCAGATGAAGTTGCAATCGTGCAGAGAGCTGACATTTAAGAAAACAGATACGCAAGAGTATCAGTCTCTTTCTCTGAATGACTTGATAGATGGTGAAAAGGATGAAAGATCCTCTAAAGAGAAGCCGATAAATCCAGTTgcgaaaaaaaacaattctgGAAGACCTAAAAAGAGCAAagcaatttcttcaatttcttcgcaaGATACAAATAGCTTGATGTGCGACATTTGCCACCAAGAATTTGGCAAACAAACGTTATATCGAAAACATATGGAAAATCATGCAGAGGAAAAACCACATCGATGTCCAAAATGTTCCGCGTCGTTCAACGTGCCGGTAACAAATTTTACGCTTCACATGGCAACTCATAATACGGGTGAACCGAAATGTCCAGAATGCGgtaaaaaatttgcaagaatGGCCAGTTTAAAGTCTCACATGTTGTTGcatgagaaagaagaaaatttattctgtaCAGAATGCGAAGATGCTTTCTCCACGAAAACTCAATTGGATGCACATTTGAAGCTTCATGGAGAAAAATGGGCGATTGAAGAAGTACGAAAgtgtaaattatgtaataaacaGTTTAGTCAACCAGCCTTGTACAGACTTCATATTCGTGAACATTATAGAACCAAAGTGGTGAAGCAAACGAAAAGAGGCACAAAACACAAaacaatgtataaatgtacCATATGTTTGAAGTCTTTTCAGAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTCaagTGTACGATATGCGGTCGTGCTTTCACGCAAAAGAGTTCGCTACAGATCCATACGTGGCAACACAATGGTATTCGACCGCATGCTTGTGAATTTTGTAATGCCAAGTTTAGTCAGAAAGGTAATTTAAATGCTCATATAATGAGGGTTCACAATGTCCCAGATGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGCAGTTTGAATGGTCACGTGAAACGCATGCATACAGATGTAAACGAGGAGAACTCCGTTAAGAATAATGCTCATTCGAGTGATAACGTGGAGTCCGATATACGTGCAACGGTGAATAACGTTATAACGCAACTGGCATCTTTAGAATCCAACGTTCATCAACCTACGGATTCGTCAAATTTCGAGACGCGTCTGTTATCGGAAAATACAGCGAGAAAGGATATTTTGCAACAAGCGTTGAAAAACAGTGGTCTTCCTAGTAAAAACAAAACTTCTGCTTCTGAAGTAAGTATGCCGTTCACGAAGCTTGTTTCTCGCAGAAAGTATTTGACGATAAAGCAACGATGCGTAGGAAACGTGAAATGGTACGCGTGTACATTTTGTCACAAAGAGTTTAAGAAACCGTCAGATTTGATACGTCATTTACGAGTACATACTCAAGAAAAGCCTTTCAAGAAAATCGACAACTTGCAATTAAGTGCCTTTTATGCTAGATTGCATGCAAAGTCTGACAATTGTTTCGATAAAACCATTGACAACGAGAAGGATTCCGACACGCACGTTACGATCGAAACTGATATTTATTCTGGTAATCAGTCGAAAACCCAAACAAAGGacaaatcaaaattatcacCGGAAGCAGAAAGTCTAGTACCTCAGGTGATCTTGCAAGAACCGTTAGTAATTAGCGACacgggaaataaaatttccgtgGCTCCTTcgggaaagaagaaacatgCTTGTGACGCAACTGCTGATCAGGCCAGGCCCCATAAGTGTTGGATTTGTCAGGCGGCATTTAGAAAGATCAGCCATTTGAAGCAACATCATCGTTGTCATACCGGAGAGCGTCCATACAAATGCACAAAATGCGATAGGAGATTCACGTCGAATAGCGTTCTAAAATCGCATTTGCATACTCACGAGGATTCGAGACCACACGGTTGTTCTGTTTGTAATGCGAAATTCTCTACGCAGAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACCAATTGGAACACCAGAAAATGAGAATACAAGAACAAGCTTCGGACAAGTTGAATACGAAGGAAAGTCCTAAACAAGAAGCGGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTACTATTAATTCCACCATTACCACCAACATTTCTATCACGACCACCGCCAGCATCACCACTTCTCCCATCGTCACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAACCGCAGCTCGGATCAGAGTTTTCACAAGCTTTTCCtgaatttcaaagtatcaccgaagagaaggaaaaaataagGCCAGTTTTACCAACAAATTGCGATGCCGCAGCATTTATTAATCAGAACGTGGGAGGTATAGCTGTAACGAATCTCGAAAATTCACCAATATTACAGGCCGATGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTTACACCGGTATTGTATATCATATGTATATCATGCTGCCAAGTTGTTGATGATGAACTTGAGCAAAAAACATTTTTTAATATCGGAATGAACTTTAACTTGGGAGGAAGTAATCACTCGAGACATTCAAACAGTGCAAACGCGAGTGATTTTGGCCATGATATGAAAGAACAGCAGCAGCCTGTGTTGAATGTTATATAtgaaaacaacaacaacaacaacaacaacagtaACAGCAACGGCAACGTAGAAACATCCGGAGAACATGTGTTTCCGGCGCAATTAGATTCATTTGAAATGGATCATATTACTTTGCAATCGGATGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACTAGCATGGCGAGTATACTGCCAAGGAATATGAAAGATGAACGTCGACTGTCTGTTTGCGTTGCGACACCAGATATCATAAACGTTGAACAATCAGAAAAGTCTGGTGTCCAAGCGGTGGTATTTGTTTCTCAGTCAAATTTCTCCAAGAAGGAAAACGTAACGAACGAATTCGCTGTAGAAGAAACtcaaaaaaacaatattcccAAAGAGTGTACAATCAATCAAATCTTTTTTACAGAAGACCTTCGGGGAACGGCGCAAGATTCGAAGGTTCAATCAAATATGCACGCACTGTCATCCAATGTTGCAGAAATCGTTGAAACCGCTACGAGTAAAATATCCTGTGAACAATCACTGTTACAATGTCACATGTGCAGCCAACAAGGATTCACAACAGTTggtttaaaaGAACATTTGACAAGTCACCGTGGAACAAAGGAGTATCAGTGCACAGAATGctcttcgaaattttacaCAAACGGTGGATTGAATAGACATTCGAAGATTCATGTGGTTAAACAATCACTTAAATGTTCGTCGTGCGAGAAGCAGTTTAACAATAGAGTCGAACTGCGATcgcataataaaattcatgaaacTTCAATGTGGAACGCTTCAGGGACAAATGCCAATGCAGATGATTCGGCGCTTTCATCGGACATGCATCAATCACGGGTTGTAAATAGTCATTTGCCAACAAGTAATATCGCAATAGAATCTGATTCTACCGTTTCGGAGAAAGTTCTACTGGATACAGTAGCTGAGAGAGAAGTAATGAATCAAGTAGAAAATATATTCGTGGGGAAAAAGGAGCGAAAAGAGTATACGAACAAATGCAAGTATTGCCCAAAAACTTTTCGCAAACCGAGCGATCTTATAAGACACGTACGCACACACACCGGGGAACGACCGTACAAGTGCGATTACTGCAGCAAAAGCTTCGCCGTGAAATGTACTCTGGATTCTCATACAAAAGTTCATACGGGGAAAAAGACATTTCGTTGTCACGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTTTGCATACGGgTTCAAAACCATTCAGTTGTCCCATTTGCGATTCGAGATTTCGAACATCCGGCCATAGAAAGGTACACTTGTTGAAACACGCGCGCGAACACAAcgcaaaaagaaagcaaaaacatttaaaagttGCGGTCATAGCAGAAGTGGCGGCTGCTCTTGAGAAATGTAacgagaaggaaaggaaaatggACAGTTTCGAGGGAAAGCAGCAGCAACTAGCGCAAGAAGAGCAACAGCAGCTTTCGCAGACGGTCGCCGGATTAACGTCTCCTTTAGAGACATATAGTATTGAAACAGCAACTTCCTGTTTAAccgatcaaattaatttcgacgCGGAAGCTATCGTGTCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTAGTtacgaatttacattttcttttgacAAATGGTCTTGTCACCATTCAAACCGAAGAATCATTATTGTCGCAAACATCCGCACCCTCGGTTAACAATTCGCATCATCGACCAGTCGAGGTTGCCGATGCTGGATGTGCATTATTGTCAACGTCCAGCGTTGTATCCGACACTAGCGAGCAGCATACCAAGGAAGAAATTCATATAGAACAAATGTTGAAAACGCCATCGAATAATTGCCTTTTAACAGTATCAACTGTGACACCGCCGCGACTAGAACAATGTTCAAAAGTGACTGCGGAAGAGACGTTGTCAGTGGTAGCCGATAAACCAACGACGAAAAGAAATCTGTCGAAAAAGGAGTGCGACATTTGTGGGAAAACATTCACGAAACCGTATCAAGTCGAGAGGCATAAACGAATTCACACGGGTGAACGACCGTACAAGTGTGACCTGTGCACGAAATCATTTGCTCAAAAATCAACTCTACAGATGCATCAGAAACATCATACAGGCGATCGGCCGTACGCTTGCCCGTATTGTGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACACATGTGAAACGCGTTCATCAATTGGATACCGTGGACGCGAAGAAATGGAGGCGCGGCCGTCAATCCTTTCTGTCGAAAACATCATTTCAAGAAAACACCATCGAAGACAAGAGTCTAAATTTAGACAACATATCaattcttgAAGGAAAACTGAGAGAAAATTGA
Protein Sequence: MEKMLTRQNVVTESPHVETIPINFVATEDGRTLLALTEHKDDMLEIVATPVMLVGQSGTATSLIDVKNLNGNLILHSPVFQISVENIVNESELQQSTQILEPESFNDVDQMKLQSCRELTFKKTDTQEYQSLSLNDLIDGEKDERSSKEKPINPVAKKNNSGRPKKSKAISSISSQDTNSLMCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPVTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAIEEVRKCKLCNKQFSQPALYRLHIREHYRTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPDGEPIYGCNYCSCVFKKLGSLNGHVKRMHTDVNEENSVKNNAHSSDNVESDIRATVNNVITQLASLESNVHQPTDSSNFETRLLSENTARKDILQQALKNSGLPSKNKTSASEVSMPFTKLVSRRKYLTIKQRCVGNVKWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKKIDNLQLSAFYARLHAKSDNCFDKTIDNEKDSDTHVTIETDIYSGNQSKTQTKDKSKLSPEAESLVPQVILQEPLVISDTGNKISVAPSGKKKHACDATADQARPHKCWICQAAFRKISHLKQHHRCHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPHGCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYQLEHQKMRIQEQASDKLNTKESPKQEAALESSSSSSVSVTTINSTITTNISITTTASITTSPIVTTSSSTFSDNLALSRLGSVELSFQPQLGSEFSQAFPEFQSITEEKEKIRPVLPTNCDAAAFINQNVGGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPVLYIICISCCQVVDDELEQKTFFNIGMNFNLGGSNHSRHSNSANASDFGHDMKEQQQPVLNVIYENNNNNNNNSNSNGNVETSGEHVFPAQLDSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDERRLSVCVATPDIINVEQSEKSGVQAVVFVSQSNFSKKENVTNEFAVEETQKNNIPKECTINQIFFTEDLRGTAQDSKVQSNMHALSSNVAEIVETATSKISCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKCSSCEKQFNNRVELRSHNKIHETSMWNASGTNANADDSALSSDMHQSRVVNSHLPTSNIAIESDSTVSEKVLLDTVAEREVMNQVENIFVGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFSCPICDSRFRTSGHRKVHLLKHAREHNAKRKQKHLKVAVIAEVAAALEKCNEKERKMDSFEGKQQQLAQEEQQQLSQTVAGLTSPLETYSIETATSCLTDQINFDAEAIVSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSAPSVNNSHHRPVEVADAGCALLSTSSVVSDTSEQHTKEEIHIEQMLKTPSNNCLLTVSTVTPPRLEQCSKVTAEETLSVVADKPTTKRNLSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDAKKWRRGRQSFLSKTSFQENTIEDKSLNLDNISILEGKLREN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: -
80% Identity: -