Fvar008016.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- Trerf1
- Assembly
- GCA_011392965.1
- Location
- WNWW01000366.1:43028-140781[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1 2.5e+03 -2.1 0.2 29 42 827 840 825 841 0.88 2 2 9.1e-12 5.4e-09 35.2 0.0 2 46 993 1037 992 1037 0.96
Sequence Information
- Coding Sequence
- ATGCAGCAaacgcagcagcagcaacagcaacaacagcagcagacATCCGCGCAACAGCCACAGCAACAACGAAACAATTCGTCGACCACAGTCACAGCGCAGATACAGAAAACGCAAAAACCGTCCGTCAAGTCCACGACCTCGTCTGGCAACGTTTCGAATAACTCTGGGAATTCGAGTGCGACCAACAACGCGAGATCCAGCCCGAAGCCCAAAGTCTGGAGCCACGTGCAGcaacaacagcagcaagCGCAACAGCAAGctcagcaacagcagcaacagcagccgCAACAACAGCATCAGCAGCAACAGCCGCAGGCTAATTCGCCAGGGGGCGGCACAATGGGGAAAAGTAGCCCATCGCCGGGGAATTCGGCGTCCCCTGGCACCGTGACGGCGTCCAACAAGTCGCAGACCGAGCCAAAACCGGTCGAGTGCAATTTGTGCCAtcggaaattcaaaaatataccgGCACTCAATGGCCACATGAGACTCCACGGCGGTTACTTCAAGAAGgATGCTGAGAACAAGAAAAGCGAGAAGAAAGAGGTGGTCGGGCCGCCTTTACAAACCGCGTCTGTCAGCGTGAGGGCGCTTATCGAGGAGAAGATTATACAGAAAAGAACGACTGCAGCAGATACGAGCACGAATCAGCAGGCTCGCGCGAACGCAACGGTTTTTACCACCCAAGCTGACAGCGCGTCGCAGATTTCCGGTAAAACGAGCTTCGCGGTGCCAGCACCGCCTCCACTCGCCTCCGCGGAGAAGGTCCGCAGACTTTCGGATGGCGAACACTTCCGGCAGCCGAATGTCACCGTTTCCGGACACGCGACCGTGCAGAAGCAGCTACAAGAAGCGCAGACACAGGCTCAGGCGCAGGCGCTGGCCGACATGATCCTGAAGGGCACCACCAAAATGGCTGTGAAGAGAACGACTTCCGATCCCGGGCAACGATTGCATCTGACGTATCAGACGTCGGTTCAATCGACGACCAatcaacagcagcagcaacagcaacaacagcagcaacagcagcagcagcagcaggcacagcagcaacagcaacagcagcagcagcaacagcaacaacagcaacaaaatAATCAACCTCAAGCTCAGTCTGCGGTTACAGACAGTTTTTCAATGACGGGTTACTCTGAGGACGGTGGTTACTTTAGCCCGAGTCTTCAAGATGAGGTGTTCCAACAGGTCACCGCAGTTCCCGATAGCGTTCTGCTTCACGCTACTCAATTGGATTCTCTTCAGTTTCAGACAGCGAGCCTACTGCAAGAACAGCCAGCCGAGCAATTGCAGGACATCACCCTGGAAGACCGATATCCATCTCAACACACGGTTAACCCAGACCTGCAAGCGCTGGTCAATTCCCCATTACCGGACTCGCTAGCCGAGTTCAGTACCTACGGTGCCCAATACACGGAGAGTCCGCACACCTTGCCAACTCAGTCTCCGTTGTCGTCGCCACTGACGAGACACGACAGCCCAAGCTTCACATATCCAACGCCGCCAGCCAGCCAGGAGGGTCTGCTAACCGGAAGCTTCCCACTGTTGAGTCCTCAGGAGGATCCAGAAAGCGTGAGACAGGTCTCGTCGCCTCTGTCAGCGGCTTTCTACGCGACCCCGATGTCCTCCGCGGCAGCGGTGGAGGAAGCTCTGAGCGAAGTATTGCCAGGCGAATCCGAGGCAGACGCCGACCTGTACGGGTCCGGTTCGCCGAATCCGCACTCGCCACTGCCAAGCCCATTGTCGGCGACTCCAGCACCATCGCCGCTGTCCTCGTTGCCACCGTCATCGGTCTCGTCGCCGGGGCCAGTGTCGTTCACTGGCGCCAGCTTCCCCGTGTCCCCGCATCACGCGCTCCAAAATCAAATGATGCCAAACTCGGAGGACCCGCTGCTCTCGTCCACGCCGAAGGACTTCACGACAGCCAGTCGCAGACGGTTCGAGTTTCAATCGTACAAGTTCATCACCAGCCAGAACTTGGTCGACTTTGGACTGGGCAACGGTAGCCTGGCTGGCATCGTAGTGGACAACAACGGGGAGTTCAAGCTCATCCAGACAGCCGGGCTGCAAAAGACGAACGTGCTGGTGCAGACGGGCTCCGTGAGCCCGGCACTGACATTCAAGAAGGAGATGCGGCTGGCCACACCGAAGGTGGAGCCTGTCACCGTGAACCTCGGCCTAAACGTACAGACGAATCATCAGTACAACGCTGGCCAGTTCAATCAGCAGCAAGTGGTCAACCCGACCAAGTTTCTCATACAGACGAACGTGGCCAAGAGCAACATGAGACAGAAGACGATCAGCGGGAGCTTGCCTATCCCGGTGGAGCAGATCAAGGAGGAGCTCCTCGACGAGGATGTATTCCTCAATCCTAGCAACGTGCCGGCTGGCAGCCCTGTCAGACAGTGCAGAAAGAGGCCTCGCATGGACGGTGGATTGTACGCGAACGCGTCGCACTCGTACCCGTCGAGATTGAGGAAGGCCTGTGACCGACACTGGGACAGTAGCTACACACCTCCGCCGATTTTGGACCCTTCCAGACCTGGGCCAGGGCTGTACGCGAGGCTGCATCAGTACGAGAGGGATTCTGATTTTAGCTCGGACGATTCGCAAGGGAACGACGGACCACCGCCGAGGATCAACATCGGGACGAGGTACCAGGCAACGATACCTCCGATCGGCAGCGACGGAGATAGAGGAAAAGGCGAGCCCGAGGCTGATCATCTGCTCTGGGATCCTGGTATAAATAACCTGCTGACGGATAACGAACTGGAAATGTACCTACAATTTGCATGCTGCGCCGCGGTACCAGGTGGAGGAAGGAACAAAGAATACGCGCTTCATCTGCTGCACATGTGCAAAGGAAACATTCATGAAGCAATGCTGAAGCTGATGAGACCAACGCCTCCGTTGCCAGCGGAACATCCGCTGCTGAGTTACGAGTGCCACGAATCTGACCGGTGGACGTCGCAGGAAATGGACGCATTCTATCAGGGCCTGTTGAAGTACAACAAGGACTTCTCAGCGATCTCGCGAGACGTCGGCGGCAAGTCCGCGAAACAGTGCGTGCAATTCTATTATCTGTGGAAGAGGCTCTGCCCGGACGAGTACAGGCGACTGCGTGTCCGTCACGGTAAACCAAAGATTAAGACAGAGAGCAAGGATTGCAAGGACACTAGGGAGCTCCGCGACGCCATCGCGTCGGTCACTGAAATGGACTTCAGCGAGGACAAATCGATTCTTCATCGCACTCTGTTACAgacaaacgagagagagaactcgGCCACTCTAACCACCAGCGACGGAGAGCTGAGATTATTCGCATACGACTGCCCCGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCCCACAGGCCGGTACCCTCGCCCGATTCAACGGGACAGGAATCTAAGAGGCCCGTTCAACAGCAATCGAAGGTGCAGCAGTCTCAACAATCCAaccagcagcagcaacaaccaCCAccacaacaacaacaatcgcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacagtcGAACAGCGTTTCATCGCAGGTCCAAGACTTCAATCAGCAGCAATTGCCTCCGAGCAACAACGACACCGGCGCTCAGAATGCAGCGCATTTATGGCACAACCCGACGCGGCTCAGGCCACCATAG
- Protein Sequence
- MQQTQQQQQQQQQQTSAQQPQQQRNNSSTTVTAQIQKTQKPSVKSTTSSGNVSNNSGNSSATNNARSSPKPKVWSHVQQQQQQAQQQAQQQQQQQPQQQHQQQQPQANSPGGGTMGKSSPSPGNSASPGTVTASNKSQTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAADTSTNQQARANATVFTTQADSASQISGKTSFAVPAPPPLASAEKVRRLSDGEHFRQPNVTVSGHATVQKQLQEAQTQAQAQALADMILKGTTKMAVKRTTSDPGQRLHLTYQTSVQSTTNQQQQQQQQQQQQQQQQQAQQQQQQQQQQQQQQQQNNQPQAQSAVTDSFSMTGYSEDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSLQFQTASLLQEQPAEQLQDITLEDRYPSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLSSPLTRHDSPSFTYPTPPASQEGLLTGSFPLLSPQEDPESVRQVSSPLSAAFYATPMSSAAAVEEALSEVLPGESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGASFPVSPHHALQNQMMPNSEDPLLSSTPKDFTTASRRRFEFQSYKFITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGSVSPALTFKKEMRLATPKVEPVTVNLGLNVQTNHQYNAGQFNQQQVVNPTKFLIQTNVAKSNMRQKTISGSLPIPVEQIKEELLDEDVFLNPSNVPAGSPVRQCRKRPRMDGGLYANASHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPIGSDGDRGKGEPEADHLLWDPGINNLLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMLKLMRPTPPLPAEHPLLSYECHESDRWTSQEMDAFYQGLLKYNKDFSAISRDVGGKSAKQCVQFYYLWKRLCPDEYRRLRVRHGKPKIKTESKDCKDTRELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQESKRPVQQQSKVQQSQQSNQQQQQPPPQQQQSQQQQQQQQQQQQQQQQQSNSVSSQVQDFNQQQLPPSNNDTGAQNAAHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068231;
- 90% Identity
- iTF_00142129;
- 80% Identity
- iTF_00734221;