Fvar006463.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_011392965.1
- Location
- WNWW01000906.1:82648-107491[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 4.2e-15 54.4 0.1 1 45 462 507 462 507 0.96 2 2 1.3e-18 1.3e-15 56.0 0.0 1 43 824 867 824 869 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATcaggacaccctgtacagCGGTACTCGCAGCAGCGAATCACTGACGGCACAGCCCCACCACCGGCTATACCCGGCGTTCTCGTCGTCCTGCGACCCGGTGCCCGGCAACTTGGAACAAATTGGGTCGCGTCCGCTTCATCCTGCGTCCTCCTCGTTACCTACAACGATAACGGCCACAACGACGGAGTCGACGGTGACggccacgacgacgacgacgacgacgacgacgagcacgtcgacgacgacaacAACGGGAACGAGCATCCTCGCCGTGTGCACCAGTACAGCGACCGGCACGATCGCCACCATCAGCACGGCCGCGATGACCACGGGGACCACCACGATCCCGACGAGACGACGACGCAAACGCCGGCAGAACGATGGAGAGGCCACCGACGACAGAGAGGACGACGAAGagaacgaggaggaggaggacggGAGAGTCGGACAGGCCGAGACGGAGAAACGGCTGAAACTGGACGAAAACGCCGACACGAGCAGGCCCGTCAGTCCTCTGAGGAGGGAGAACGATCGAGGATCTCGGGATTATCCGACTGCCAACGCAACAGACACGGAAGGGACCAAGGAACGAACGGAGGAAGTCGCGTTGGAGCGGACACCGGTGACGCAGGGTTCGTTGCGGGTAAAAACGGAGGAGGAGCTGCAAGGTGTGCCGAGTTGTGGAGGAGGCGGCCCGACGATATTGACGACACCGGCCCCGGATTCGGACGGCATCAGGTCAGGAGTACTGCCGTGTCGGGAGGTTGATGCAGCCGCTAGGAACACGGTAGCGCCGTTTCTCGTCGGTGGAAGCCGACGCACCAGCCCACCGCCGGAAGACTGGAAGCCGCTAGACAAGTGTTACTTTTGCCTGGACGGCAAGCTACCGCACGATGATCAACCACCACTCAGCCCGCAGAGCGACAGTAGCAGCAGCTCGCGGTCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCGTCCGTGGTCGCCGCCGCTCTCACCGGTAGCTACCCTACCCTACTGCCACAGTGGTGTCTGCCACCAAGGGAGGCACCTCTCGTTGCAGGGGTGCAGCCTCATCAGGACAGTGCAACGCCAGCCGATCAACCTCTCGACTTATCGGCCAAACCGAAAAACTCTCAGGATAACAACATATCTATACTGGAACAACAGAAAATACCTCTGAGGATGACAGCAGGTATCGACCCCAAGAGTATCTTTAATTCTTGTTACCGCGCGAAACCACGTATGACCGGGCCGGTGGCGGCCGTGGCGGCGGCCGCAGCAGCCGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAACTGCAAGCCGCGCTCAGGGATATCCAGAGTGGCAAGCTCGGCACACGAAGGGCGGCCGTGATCTACGGGATACCGCGTAGCACACTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTCTCTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccactactactactactacaaCTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAACTGTCCGGAGcggaagaggagaaagaagtgGAGAAAGCTCTGTTGAAGCCGCTGTTGTCCTTGGAGGACCTCGTCAGGTTTTCCGCCCTGGAAGGAAGCGGCGGTGATTCCCTAAGAACGTTGCTGCAGCGAGGACACGAGACGGGAGCCGAGTGGCCAGGACTCGAACACGCCAACATCGGTCCGTATATTCAAAAGATGCTTGCAGCCGCGGCGCCATTTAAAGGTAAGAGACGCGTTTACTTTTTCGCTCCTCTTCctGGCAGAGCGATTCTCAAAATTCCGTCCTACAAGCCGGCGAGCACGCCCGGTTGTTCGAGCAAAAACGGCGAGCCAACGTCGGCCGCGTTCGCGCAGGGATTCGCAGCGGCGACCGCGGCCTCGAGTCCGGGACTTCTGGAACGGGCGAGCCCCGCGTTCTCCGGCACCAGTAGCCCGACCAACTCCCTGGTAGGGAAAACCGTGGCGGTGAACTTCCGCGACGTGATCGCGAAAAGCATCAGCGTGAAATTCCAAGAGGGGCAGACGGTGGCCACCGCTGCCGGGATGCCCGGATGCCAGCCGAGCGGGGTGGTGCAGTCGCAGCAGACGATAATGGCGGACCCGAGCCCGTTCAAACGAGGTAGATACACGCCGCCTCAACCTGCGACGCAACAAGCTCAGACGCAGGCGAAACCGCAGACTCAGGAGGCGAACAAACCGAAACCAGCTACCGGTGGCAAAGGAACCAGACCGAAACGCGGCAAGTACAGGAACTACGACAGGGACAGTCTGGTCGAGGCTGTGCGCGCTGTCCAGCGGGGCGAAATGAGCGTGCATCGCGCGGGCAGCTACTACGGAGTGCCACACTCCACTCTCGAGTACAAAGTTAAAGAGCGGCACCTGATGAGGCCAAGGAAGAGGGACCAGAAGCAGTCGGACGACAAGACGAAGGAGACCTCGGCGGTGACAGCGGCGGCAGCAGCCGCGAACATACGACCAGGCACGGCGGACAAGAAGCCACAGTTGAAACCACAGAAACCGTTCACGTCACCGGGCGGTATCCCAGGGCCCAACGGGATCAAAATGCCGCCGTTCATCGAGGGCATGCCTCATTTGCCGTTCACGCCGTTCAATTTCTGGAGTCCGCCGCCGTTCATGCCGTCGCCGTTCATGGCCGGTGCACCGAACGTTCCGACGATTCTGCCGGAGCAGTACTTTGCAACGAGTAGGATCCGCGGCTTGCAGGAACAACAGAGGAACGCGGCCATGgtacagcagcagcagcagcaacagcaacagcagcagcaacaacaccAGACGCAGCGAGACAGAGACGGGATTGGCGTGGCTGCTGCGACGGCCGAATCGCCGGGAACCTCGAATTCTCGTGGCACGCCGATGAGCAAAGCGCCGCGGGAGGTGTCGGAGAGCCTGTACGACGGTTCGGGCGCGAACGGCAGTTTCTTGGACAATTTGATCAGGTCGAGTCTCGAAACGGGAATTCCAAGGGACCAGAGGGCGATGACCGACGCGAGGAACCAGCAACAGTCGTCCACGCAGCAACAACTGCCGGAATCGATGAGGAGCAAAGCGTTGATCGATCAACTGTGCAGAAACTCGAGGAGAACGCCGGTGCCGAGGCTGGCGCAGGACAGCAGCGAGGACGAAAGCTACAGGGGACCATCGGCGACCGGGAGGCCGATACCGGAGAGGCCGGAACGCGTGCCCACCGTTGACCTTAGCCCGTCGCCGTCGGAACGCGGCCGCAACGACGACGGTAGCGATCGGCTCACGTCGCCTCCGACGCCCCTCTCGATCTCGAGGGCCGGAAGCAGAGACGAGGACAGTACACGGGACTCGAGGATAGATCGCAGCAGCAGGGAACGGGAGGTTCACAACGGTGGACAGGAAGATCGTGATAAAAAGAGCGttcagcagcagcaacagcagcagccgccgccgccgccgccgcagcagcagcagcagcagcataaaaataaaaaagaaatgaaatataaaacagaagaagaacaGACTAGCAAATTCGAATGGATCCGACAAGAACAAGTCACGTACCGAAAATTGAGACGTTGTCTTCACAGTCGTCGGCGAAGATCGTTCCCGTTTCGCGGGAAACTGTTGAGAATTCACTCGAGGAAATGggAGACGGCAGGACAGAGAACGAGAAGTCCAATTGGCGCGGAATTAAAGACGCGGCCACCGGTGGGTGGCGAATCTACGGGCCTCAATGTGGACGACAATATAGTTACTTCCGCTGGAGGTACTTGCAAGCTCGCCGTGACCGCCATTGCCACAGCAATAACGATCCTATTCCTAgccatttaa
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESLTAQPHHRLYPAFSSSCDPVPGNLEQIGSRPLHPASSSLPTTITATTTESTVTATTTTTTTTTSTSTTTTTGTSILAVCTSTATGTIATISTAAMTTGTTTIPTRRRRKRRQNDGEATDDREDDEENEEEEDGRVGQAETEKRLKLDENADTSRPVSPLRRENDRGSRDYPTANATDTEGTKERTEEVALERTPVTQGSLRVKTEEELQGVPSCGGGGPTILTTPAPDSDGIRSGVLPCREVDAAARNTVAPFLVGGSRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGSYPTLLPQWCLPPREAPLVAGVQPHQDSATPADQPLDLSAKPKNSQDNNISILEQQKIPLRMTAGIDPKSIFNSCYRAKPRMTGPVAAVAAAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPFKGKRRVYFFAPLPGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQTVATAAGMPGCQPSGVVQSQQTIMADPSPFKRGRYTPPQPATQQAQTQAKPQTQEANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSAVTAAAAAANIRPGTADKKPQLKPQKPFTSPGGIPGPNGIKMPPFIEGMPHLPFTPFNFWSPPPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQQRNAAMVQQQQQQQQQQQQQHQTQRDRDGIGVAAATAESPGTSNSRGTPMSKAPREVSESLYDGSGANGSFLDNLIRSSLETGIPRDQRAMTDARNQQQSSTQQQLPESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSATGRPIPERPERVPTVDLSPSPSERGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDKKSVQQQQQQQPPPPPPQQQQQQHKNKKEMKYKTEEEQTSKFEWIRQEQVTYRKLRRCLHSRRRRSFPFRGKLLRIHSRKWETAGQRTRSPIGAELKTRPPVGGESTGLNVDDNIVTSAGGTCKLAVTAIATAITILFLAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215624;
- 90% Identity
- -
- 80% Identity
- -