Fvar006782.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- kn
- Assembly
- GCA_011392965.1
- Location
- WNWW01000239.1:115532-202473[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-232 2.5e-228 758.3 0.0 39 455 20 434 16 442 0.94 2 2 0.016 1.6e+02 -0.5 9.6 443 514 456 527 443 545 0.67
Sequence Information
- Coding Sequence
- ATGAGGCAAATACTCAAGGAGGAACCCGTGCCACGTGCCTGGCCACAGCCCGCGCTTGCCGACAACGGAACGGTTGGCGTGGGCAGAGCGCACTTTGAGAAGCAACCGCCGAGCAACTTGAGGAAGAGCAACTTCTTTCATTTCGTGATCGCTCTGTACGATCGACACGGCCAGCCGATCGAGATAGAGAGGACGTCCTTCATGGGTTTCGTCGAGAAAGACCAGGAGTCTGAAGGCCAGAAGACAAACAATGGCATTCAGTATAGCCTGCATCTGCTGTATTCCAACGGTGTCAGGCAGGTGCAGGACATCTACGTGAGGCTCATCGACTCTGCAACGAAACAGGCCATCATGTACGAGGGTCAAGATAAAAATCCCGAAATGTGCAGGGTCCTTCTCACCCACGAGGTGATGTGCAGTCGGTGTTGCGACAAAAAGAGCTGCGGAAACAGAAACGAGACGCCGAGCGACCCTGTAATTATCGATCGATTCTTCCTCAAGTTCTTCCTCAAGTGCAACCAGAACTGCCTTAAGAACGCCGGCAATCCACGCGATATGAGACGCTTCCAAGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGACCACTGCTGGCCGTCTCGGACAACATGTTCGTTCACAACAACAGCAAACACGGGCGTAGAACGAAACGATTGGATCCCAGTGATCCCGGAGAGTACAACAGTCTTTACACGCCTGTACCTCTTCAAACGCCGTGTATAAAAGCGATATCGCCGAACGAAGGTTGGACATCTGGCGGATCCACGGTAATAATCATTGGAGAGAATTTCTTCGATGGACTTCAAGTCGTTTTCGGCTCGATGCTGGTTTGGAGCGAGCTAATTACGCCAAACGCAATTAGAGTACAAACTCCACCACGGCAGATACCAGGCGTCGTCGAGGTCACGCTGTCCTATAAAACTAAACAATTCTGTAAAGGAGCGCCTGGTAGATTTGTTTATGTTTCGTTAAACGAACCGACGATCGACTACGGCTTCCAAAGATTACAGAAGCTCATTCCTCGGCATCCAGGGGATCCCGAGAAATTACCAAAAGAGATCATACTGAAAAGGGCAGCGGATCTTGCAGAAGCCTTGTACAGTATGCCGAGAAGCGGAAACGCCGGAATCACCGGAGCGCCAAGGAGTCCGGGATCGGGTCATCCACCTGCACCACCGACCTCCAGTTCGGCAACAGCGTTCAACTCGTATACAGGACAACTGGCAGTGACGGTACAAGAAAACGGTAGCGCGACGAAGTGGACAGACGACGGTAGTTCGGTGACGACAGGAGCCGGTGCTGgaggcggtggcggcggcggtggtagCGTCGGAGGAAGCGTCGGTGGCAGCGCCGACGCCTACAGGCAGAGCAGCAGCGCGAGTCCACGTGGGGTCGTGACCGGTGGTGGTTATTGCGGAAGTTCGGCTAGTACACCTCACAGTCACAGCACGAACGGAAGTTACTCGGTAGCCAATCCGTATACCGGTAGCCCGACACTTTATACATCGCGACTAGGAGAGGTTGTTGGTTCACCGTTCAACATGAATCCATTTATGTTGCCCACCTGCAGTCAAGGATATTCAAACGCCGCCAGCCCGTTGCTCTCGTCGAACGGCAAATAG
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRTKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSATKWTDDGSSVTTGAGAGGGGGGGGSVGGSVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCSQGYSNAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879410;
- 90% Identity
- iTF_00142224;
- 80% Identity
- iTF_00733729;