Basic Information

Gene Symbol
ARID5B
Assembly
GCA_011392965.1
Location
WNWW01000899.1:11421-21422[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-24 9.6e-21 73.2 0.0 1 89 174 260 174 260 0.95

Sequence Information

Coding Sequence
ATGCCTCAGCCCCAGGTGCTCACCGATCCTGGCATCGATTTCTCCGACGTCGACAAACAACAGAAGGAGTACGAAAGCAATCACAACACGAGGAAGACGGACTGTATTTCCCAAACGAAGGTGGTGGTGCTCTCGTACCCCAGGTACTGTCGATATCGGGCGCTATTGCGTAGGCTCGAAGGCACCGAACCGTCCTGGCTTTGCTCGTCCATAGCAGCCGCATTGGGTGGATTCACCACCACACCGGGTACTAGGATACTCTTTTGCAGAGACACCTTCGACTACCCGGATCTTGAAACTCACGAGCTCCTCTGTAATCACCTAGcGCCAAAATTGAAAGGAAGGCCGCGGAGGAAGCGTAAAAAGCGTAGCGCGTCGCCTGGCGAGTCGAGCAACGAGAGCGAAGCCTCCGTCGCGTCTACCTCGAAGAGTGCTCCGGCGAGTTCGAACGTGGTGGTACCGAGCGTCGGGAGGCCACCGTCGTCGGTTGTACGGCGAAGCGAACGGAAGACCAGCGccgaggaaaagaaattcctgACGGATGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTCTTCCTGTTTTATACGAAAGTGCAAATGCTCGGTGGCTACGACTCCGTCAGCGCTGGTCGACTATGGAAAAATATCTACGACGACATAGGTGGTAACACGGGATCTACCAGCGCTGCGACCATCACTCGACGACATTACGAGAGATTGCTGTTACCGTACGAGAGGTATCAAAGAGGAGAGGAAGCAAAAGTTAGACTGACACACGGAAGACGAAGCAAGAGTAGCAGCGTGTCCGAAGAATCCGAGGATATTAAGCAAGAAACAAACGATTCGTATCCATCGGAAACGCCTCCCCCTATAGAAACAAGTCTTACCGCTACAACTCCTCCTCTCCAATCAATTGTATCGACAGCACCGTTCCTCTCGAGCGAAAAACCGAAATCGGAGACCGGCGGCAAGACATCATCTCTGCGTAGCGTGAGAGTGAAACAAGAACGCCTGAAGTCATTGAACACCATGATCGCCAATAGTACGTCATCGCCCAGCCAGCAAACCAGCCAACTACCGAGTCCACCACCTTCTTCTAACACGTCAATATCAACGCCAAGTAGTACACCCTCTACCACACCGACGAGCGGTACCGGAAGTCAAAGCGTGTTAGAGAGGCAGCTGAACAGTCCCCTGATATCGCAACAAGTTCCACCGTCGTGTTCACCGCCGGGTCTTCCGGTAACTACCGTGGTAACGAATGCTTCTACGGTGGTGACGTTAACGCCACCGCCGGAGAAGGATATGAAAGAAATCAAACTAGATCCTAAACAAACCACCCTGCTGGCACAGGGTAAAGAGAACATACCGTTATTTGGTGAAAAGTCAATCTTCGCGGAGAAGGCGATAGTGCCTCCTAGGTCGCCAGAGGTGATCGACCTTGAAACAGAGAGCGACACCAGTAGGGATAAGATAATCATTCCCAGTTTTAAGAAGCGCAAGCTCGAAATACTTCGCGAGGGAGGTCTTGAAGTCACTGCCGTTGACCTGGACACGCGACCAAGTGTAATTCAGAGTAATCCTCCTGCGCCAGCTACTATGAAATCCGAGGAGAAACCGCCAATATCGTATCCACTTCCAGTCACACCTAATTCCATTCCTAAGTTAATTTCCGTTACCGTAACGCCGGACATCGGCCACATGTTGTCGTCTCCTCAAGAGCATCAGCATCATCATCAGCACCATCACCatcttcatcatcatcatcatcaacaTCATCAGCATCAAGCACGGTTGCAAACGCCGGCCAAGCAACATCCGGCTCATcataacaacaataacaatatcaCGATGAATAATAACAACATGGTGAACAGCCGCGTAATAAATCTCGGTACTTCAAATAACGCCGCGTTGTTACAATTGTACGCGAACGCCAACGTCCCGCCACCGGCCTCGTCCGGGCTACATCATCAAGCAAATCATCGTTTCGTACCGCCAACTGTTCCTAACGGTAGGATATTTCCGCCCAAGGTGACACAGTCGAGGTCGATATTCGCACACAACGAAAAAACGGTTTATGGCGATCCGAAAGAGATTCCTATCCCTCCAAAGTATCGTCCCACGCTGCACCGTTTGCAGCCGCATCAGATACACAGTAACAATGATCCCGTGTACGGCGGGGTCCTCGATTTGACGCAAAAATCAAGCAAGCCAGCGTTCCCGAGGCCGAGCTTGGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCACTGAACCTGGAGATGAGGAACTCGTCCACAATCAAAGAGAAACCACAGGattgttcgaaacgaaataccTTCCCTGGTTACCAGAACGTGCTCGACAGTCGAACAATGGCTTCGAACAACCTAGAGATCACGATCGTAAACCCTAAGCAAAAGAATAATCACCTGAGCACGTCGGCGCACGTTCGCGCACCGAGCCCGCCGAGGAATAGCACGATACCCGTTCAAAGAAGGCAACAGCTGAACGGCAAGTATACGACGAGGAGCGAACCAGTGTCACCGTACACACCTAGGAAGCCGAGTCATCCTGTTATACCGAACGTACCTAATCTGAATCACCTGAATAGTGGAAGTTATCCTAGAATGGCAACGATTCAACAACAGAACACGATCGACAGGAGAAAAAACATGGACATGAGCGGTGGTAAGGAGCAACATCCGCACCAGCATCATCCTCCGCATCAAcatcaccatcatcatcagCAGCATCAACATATACACCAACAACAGCatcaacaacagcaacagcgTCGAATCAGCGAGGGCGATAAATCGTTGATCgctcaacaacaacaacaacaacagcagcagcagcaacagcagcagcagcagcagcagcagcaacatcAGCAGCAACAGGAACCGAGGCAAACCGAGGCTGGAAGACGACACAGTGTTCCGAGTATACCTTCCGGTTATATACCTACGGTACCGCAAAACAATCCAGCTTTCCTTCCACAACTGCCAAACACGCCCGGCAAGTTCCTACCGATGATAGACCCCATGTACTATTCCGCGTTCTACAATGGTTTATTCCCCCCGCCGATTCCGCCCACGGCTGCCACGTCGTTTTTACCGCCGGAATTTAGCGCGTATTACAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGGGATGGCGGGGCAGCATCAGCCAGCTGCCCCAACGTCTAAGTAG
Protein Sequence
MPQPQVLTDPGIDFSDVDKQQKEYESNHNTRKTDCISQTKVVVLSYPRYCRYRALLRRLEGTEPSWLCSSIAAALGGFTTTPGTRILFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSAPASSNVVVPSVGRPPSSVVRRSERKTSAEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKNIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLTHGRRSKSSSVSEESEDIKQETNDSYPSETPPPIETSLTATTPPLQSIVSTAPFLSSEKPKSETGGKTSSLRSVRVKQERLKSLNTMIANSTSSPSQQTSQLPSPPPSSNTSISTPSSTPSTTPTSGTGSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVVTNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKSIFAEKAIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQEHQHHHQHHHHLHHHHHQHHQHQARLQTPAKQHPAHHNNNNNITMNNNNMVNSRVINLGTSNNAALLQLYANANVPPPASSGLHHQANHRFVPPTVPNGRIFPPKVTQSRSIFAHNEKTVYGDPKEIPIPPKYRPTLHRLQPHQIHSNNDPVYGGVLDLTQKSSKPAFPRPSLEIVKVPVVPRPNPLNLEMRNSSTIKEKPQDCSKRNTFPGYQNVLDSRTMASNNLEITIVNPKQKNNHLSTSAHVRAPSPPRNSTIPVQRRQQLNGKYTTRSEPVSPYTPRKPSHPVIPNVPNLNHLNSGSYPRMATIQQQNTIDRRKNMDMSGGKEQHPHQHHPPHQHHHHHQQHQHIHQQQHQQQQQRRISEGDKSLIAQQQQQQQQQQQQQQQQQQQQHQQQQEPRQTEAGRRHSVPSIPSGYIPTVPQNNPAFLPQLPNTPGKFLPMIDPMYYSAFYNGLFPPPIPPTAATSFLPPEFSAYYKELLASSQPRLGMAGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873603;
90% Identity
iTF_00873603;
80% Identity
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