Fvar002598.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- KDM5A
- Assembly
- GCA_011392965.1
- Location
- WNWW01001021.1:61175-71588[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8e-26 5.6e-23 80.4 0.0 2 89 109 192 108 192 0.94 2 3 2.8 4.1e+03 -2.5 0.1 49 81 824 854 821 859 0.65 3 3 3.2 4.6e+03 -2.7 0.0 49 64 1034 1049 1031 1059 0.77
Sequence Information
- Coding Sequence
- ATGCTATCGAGGTTCGACACAAATTTTGGCTGTGAGAATTTTTTCGGGACTTATCGTTGCACCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCATCATTCCGCCAGAAGCGCCGGTCTTCGAACCAAGTACTGAAGAGTTTCACGACCCCCTTGGCTACATTGCGAAAATACGACCGATCGCAGAGAAGTCTGGCATTTGTAAGATCAAGCCGCCGCCTAATTGGCAGCCACCATTTGCTGTTGATGttgataaattcaaatttgttcCAAGAATACAAAGACTAAACGAATTAGAGGCAAAAACAAGAATAAAACTTAATTTCTTGGATCAGATTGCAAAATTTTGGGAACTTCAAGGTTCATCTTTAAAAATTCCGCTTGTTGAACGCAAAGCTCTTGATTTATATTCTCTGTATAAGATAGTTACTGATGAAGgAGGAATTGAAACAGTAACAAAGGAAAGGAGGTGggcaaaaattgcaaataaattaggTTATCCTTCTGGACGCAGTGTTGGAAGTATTCTAAAAAATCATTATGAACGTATTTTATATCCATTTGATGTTTTTAAACAAGGAAAGACATTGGCAGATAttAAAATTGAACCAGATTCTAATGTAACTGAGAAGAAAGATAGAGATTATAAACCACATGGAATTATATCTCGACAACAAATTAAACCCCCAgctgagaaattttcacgtcGGTCAAAAAGATTTACTAGTCAGGAAGAAAAACAGGAAATATCTATCAAACAAGAAGATTGCAAAGAGGAATGTGATTCTGACAATGATTGTAAagatggaattaaaaataaacaatataatgatGATAAAGATAATAGCAAGgaacttaaaaaattacaattttatggaCCTGGACCAAAAATGGCAGGATTTAATActaaagaaggaaaaaaatcaaacaaaactAGAGGAGTAAAGCTTACTTATGAAGTTGATCCAttggCAAAGTACATTTGTCACAATTGTGGAAGAGGTgacaatgaagaaaatatgCTTTTATGTGATGGATGCGATGACAGTTATCATACCTTTTGTCTTATGCCGCCGTTAACAGAAATACCAAAAGGTGATTGGAGATGTCCAAAGTGTGTTGCAGAAGAAGTTTCTAAGCCGATGGAAGCATTCGGATTTGAACAGGCACAAAGGGAATATACTCTTCAACAATTTGGAGAAATGGCTGATCAATTTAAGAGCGATTATTTCAACATGCCTGTACATatGGTGCCAACATCATtagtagaaaaagaattttggcGAATAGTTTCTTCAATTGATGAAGATGTAACTGTGGAGTATGGAGCAGATTTACACACAATGGATCATGGGTCTGGGTTTCCAACAAAAACAAGTGTCAATTTGTTCACATGTGATCAAGAGTATGCTGAATCTTCGTGGAACTTGAATAACTTACCAGTTTTACGTGGAAGTGTACTAGGTCATATAAATGCTGATATTAGTGGCATGAAGGTACCATGGATGTATGTTGGAATGTGTTTCGCAACATTTTGTTGGCATAATGAGGATCATTGGAGttattcgataaattatcTACATTGGGGAGAGCCAAAAACATGGTATGGTGTGCCAGGCTCTCAAGCAGAACGATTTGAACACTCGATGAAATCGGCTGCACCAGAATTGTTTCATAGTCAACCAGATTTACTTCACCAGTTAGTTACTATTATGAATCCAAACATTTTAACGAATGAAGGTGTTCCAGTATTCAGAACTGATCAACACGCAGGAGAGTTCGTGGTAACATTTCCAAGAGCGTATCACGCAGGTTTTAATCAGGGATATAATTTTGCGGAAGCCGTGAATTTTGCTCCTGCTGATTGGCTCAAAATTGGACGAGAATGCATAAcgcattattcaaatttaagacgattttgtgtattttctcATGATGAATTGGTGTGTAAAATGTCGTTGGATCCAGATTCATTAGATATAGGAATTGCAACTGCAACCTATCATGATATGCTTCAAATGGTAGATGATGAAAAAAAGCTACGGAAGAATCTGTTGGAGTGGGGTGTAACAGAAGCAGAACGAGAAGCATTTGAACTTTTACCAGACGATGAGAGACAGTGTGAAGTGTGCAAGACAACTTGTTTCTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAGTTAGTTTGTTTAAGGCATTTCACAGAACTTTGTGATTGTCCCCCAGAAAAGCATACGTTGCGTTATCGCTACACTTTGGACGAGTTACCAattatgttacaaaaattaaaattaaaagcagAGTCATTTGACTCGTGGGTGACAAAAGTAAAAGAGGCAATGGATCCTGATAAGAAGAgtgataaaattgaattaagtgAATTGAAAGAACTGTTAAATGAAGCGGAAAGTAAAAAATTCCCAGAAAGTGAATTACTTATAGCTTTAACAACTGCTGTGCAAGATGCTGAGAAATGTGCAAGTGTTGCACAACAACTTTTAAACAACAAACAGCGTACCAGAACCAGACAATCTGTTGAAACTAAATACAAGCTTACAGTAGAAGAATTAACACTTTTctataaagaaataacaaatttatgcTGTGAACTGAAGGAGTCTGATGgagtaaaatttatacttgatcaagtattgcaatttcaaaaagaagCGGAAGAACTAGAATCTAAAGAGGATGATTGTGATATTGAACAGTTGGAAAAATGTATTGAGTTTGGTGATTCTATTTGTATTGAACTACCTCAACTTACATGTTTGAAACAAaaattgGCACAAATACAGTGGCTTGAGGAAGTAAAGTCTATCCAAGAAGATCCGAAGTCAATACATCGTGATGATTTagcaaaattaattgaaaaaggtATGACAATGCCTCCTCATTTAAGTATAGAAAATACTCTCTCAGAATTGCAAGCATTAATGGTTGCAATTGACAACTgggaagaaaaagcaaaattgTATCTACATACTAAAAATAGACAAACTGTTGCATCtcttgaagaatttattcatGAAGCTGATAAAGTAGAAGCTTATCTACCAAGTTTAGATGTTCTTCaagatacattaaataaaGCAAAAAATTGGACAAAAATAATGGACGAGATACAAGCAAGAGATAATTTtccatattataatacattagaTGATCTAATTAAGAAAGGTCGAAATATTCCACTGCACCTAGATGCTCTTCCAATCTTAGAATCCACGCTTTCACAAGCAAAAGCatggaaagagagaacagCGAGAACATTCCTAAGAAAAAATTCACATTATACTTTAATGGAAGCTTTATCACCACGAATTGGTGTTGGTATACAAGCATTAaaagctaaaaaaaataaaattgaagattctGTCGGACCTGTCTTTGTCTGTGATACAAAATTGGACGATTCCAATGATTCAGCTACTATTGTGGCCGCCTTTAAATTAGCTGAACAACGCGAAATGGAAGCAATGCGAAATTTAAGGGAAAGGAACCAAATGAAAACCAAAATTGACGATTCAAAGTATTGTGTTTGTCGTCGACCAAGATTCGGGCTTATGCTTCAGTGTGAACTTTGCAAGGATTGGTTCCActCAAATTGTGTACCTTTGCCAAAGACATCATATAAAGGAAAATTTCCAATGTCgagggaaattaaatttttgtgtcCGTGTTGCTTACGTTCAAGACGGCCACGATTAGAGACAATTTTGGCACTTTTAGTTAGTCTTCAGAAAATTCCTATTCGTTTATCAGAAGGCGAAGCGTTACAGTGTTTGACGGAACGTGCAATGAATTGGCAGGATCGAGCGCGACAAGCATTGGCCACAGATGAAATTTCGACGGCATTAGCAAAATTATCTGTGCTATCACAAAAATTAGTGGAAGCAGCAGCAAGGGAGAAgacagaaaaaattattagcagTGAATTGAAAAAGGCAGCGAATAATCCTGAATTACATCAGAGGGTTCAAGCAATTGCACCGCTCAGCGGTGTACACTCAGATGACAGTGCACTTAGTACTGCGGATGATGACGACGACGTTGTTACTATAGATGACGACGAACCGAGTTGTAGTACATTCAACAGTAACGAACACGCATATTCTTATATATCAAAAATTCAGCGTAAAACACAATCAAATGATGCAACGGAAGTCGCAGTTGTACTTTCACAAACAGCAAGAGTACGTCTAGAAGAACTAATGATGGAAGGCGATTTATTAGAAGTCGCACTCGATGAAACACAACACATATGGCGTATCCTAAGTCATACAAATAGCCCCAGTACAGTCCGAAAGTATGCATCGTATGACGAAGTTCACACTAACTTGAATCAAGACATAAAAGATGTAAAAAAGCGtggaaggaaaaggaaatcCGACGAAttggaattattgaaaaaactTGGCAAACAaaagatggaagaaaaaaatttagctAAACGAAAAGGattacagaaagaaaaaaaattagctaGTTCTCCAGTGCCAATGAAGCGTGGACCTCGCaagatGAAACGTAAAGAAGGCGAAGAAGGGCCAAAGAGAAGGGGTGGTAACAGAAAGAAGACCAAACAGGATACCTCGGACGAAGAGGATGATTGTGCTGCTGTCAATTGTTTACGACCCAACgGTAGAGAAGTTGATTGGGTACAATGTGATGGCGGCTGTGAAGGTTGGTTCCATATGCATTGTGTTGGATTAGATCGTACAGAAATTGCAGAAGAGGACgattatatatgtagtaaTTGTAAGGAAGCGGAGCAAAATTCAACgGGATACCAGGGCACAGATAATGAGGCAGATATTCAAGAAACCACATCCTTCGTCAGGACGTACTAG
- Protein Sequence
- MLSRFDTNFGCENFFGTYRCTQDMACDRGDSDFEFIIPPEAPVFEPSTEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLYKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDSNVTEKKDRDYKPHGIISRQQIKPPAEKFSRRSKRFTSQEEKQEISIKQEDCKEECDSDNDCKDGIKNKQYNDDKDNSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGVKLTYEVDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELSELKELLNEAESKKFPESELLIALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELESKEDDCDIEQLEKCIEFGDSICIELPQLTCLKQKLAQIQWLEEVKSIQEDPKSIHRDDLAKLIEKGMTMPPHLSIENTLSELQALMVAIDNWEEKAKLYLHTKNRQTVASLEEFIHEADKVEAYLPSLDVLQDTLNKAKNWTKIMDEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKNKIEDSVGPVFVCDTKLDDSNDSATIVAAFKLAEQREMEAMRNLRERNQMKTKIDDSKYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLSEGEALQCLTERAMNWQDRARQALATDEISTALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKTQSNDATEVAVVLSQTARVRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYDEVHTNLNQDIKDVKKRGRKRKSDELELLKKLGKQKMEEKNLAKRKGLQKEKKLASSPVPMKRGPRKMKRKEGEEGPKRRGGNRKKTKQDTSDEEDDCAAVNCLRPNGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTGYQGTDNEADIQETTSFVRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873598;
- 90% Identity
- iTF_00141055;
- 80% Identity
- -