Fvar002953.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- XBP1
- Assembly
- GCA_011392965.1
- Location
- WNWW01000417.1:43586-46524[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 1e-11 43.8 15.8 2 64 85 147 85 148 0.95 2 2 0.00073 0.39 10.0 1.0 30 56 127 153 126 155 0.93
Sequence Information
- Coding Sequence
- ATGAGCGTATTGAAAAGTGTTATCATCACGTTGCCTAAAGGCCTGTCGTCAAAGACGCCTGGCGTTATATCGGCGACCGAGTTGTCGAAATCCGTgccgaaattgaatttctgcgCCTCTGTACTAACCGACAAAGCGAGAATGGATCCGAAAAAACTTACCAAGTATGAGGAAATGCAAGACGACGGTACATCGTTCAAAACAGATGTATGCGTCCGTGGAAAGAAACGGCGATTGGACCACTTGACGTGGGAGGAAAAATTACAGAGGAAgaaattaaaaaatagggTAGCAGCTCAAACTTCTCGGGACCGTAAAAAGGCGAAACTCGACGAATTGGAAGAAACTGTTCGAACATTGAGAGAACAAAATGAATTGTTGACACAGGAATGCTCGATATTAAGATCGCAGAATGAAATACTGGTCACAGAAAACAAAAGGTtaaggaaggaaagagagagcaaGAACGTGGGAGAATTTGCCTGTTCCATGTGCCAGAGTCGTGTCGGCTGTGCTGTGTCCTCACTGGGATCTACAGTGTCCCCCACTCACCCTCTGCAGCAGGGTGGAACAACACAGCTGGCACCGTCCCTGACACTAACCCCAGGAGCAACAATTCTCCTGAAGATACTGACCATCTACCTCCTCTTGAAGAATTGTTTGGTGACCTCCAAGGTGACGATTACATCGAACGACTTGAAGAACTTGCAGAGAGCCTGCTACGGGAGGTTACAGCAGAAGTGGAAGCAAATTCTCATAGAACAAATGAACAAGTGTCAGCCAAGGAAAATACCACTGAGAAATGTCACTATCCAAAAAGAGTGGTGGGGCAGACACCAAAAGATGTGGAAACCAATGGAACCTGTAGAAGCATGA
- Protein Sequence
- MSVLKSVIITLPKGLSSKTPGVISATELSKSVPKLNFCASVLTDKARMDPKKLTKYEEMQDDGTSFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLREQNELLTQECSILRSQNEILVTENKRLRKERESKNVGEFACSMCQSRVGCAVSSLGSTVSPTHPLQQGGTTQLAPSLTLTPGATILLKILTIYLLLKNCLVTSKVTITSNDLKNLQRACYGRLQQKWKQILIEQMNKCQPRKIPLRNVTIQKEWWGRHQKMWKPMEPVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070809;
- 90% Identity
- iTF_00231754; iTF_00214166; iTF_00232376; iTF_00221692;
- 80% Identity
- -