Basic Information

Gene Symbol
XBP1
Assembly
GCA_011392965.1
Location
WNWW01000417.1:43586-46524[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-14 1e-11 43.8 15.8 2 64 85 147 85 148 0.95
2 2 0.00073 0.39 10.0 1.0 30 56 127 153 126 155 0.93

Sequence Information

Coding Sequence
ATGAGCGTATTGAAAAGTGTTATCATCACGTTGCCTAAAGGCCTGTCGTCAAAGACGCCTGGCGTTATATCGGCGACCGAGTTGTCGAAATCCGTgccgaaattgaatttctgcgCCTCTGTACTAACCGACAAAGCGAGAATGGATCCGAAAAAACTTACCAAGTATGAGGAAATGCAAGACGACGGTACATCGTTCAAAACAGATGTATGCGTCCGTGGAAAGAAACGGCGATTGGACCACTTGACGTGGGAGGAAAAATTACAGAGGAAgaaattaaaaaatagggTAGCAGCTCAAACTTCTCGGGACCGTAAAAAGGCGAAACTCGACGAATTGGAAGAAACTGTTCGAACATTGAGAGAACAAAATGAATTGTTGACACAGGAATGCTCGATATTAAGATCGCAGAATGAAATACTGGTCACAGAAAACAAAAGGTtaaggaaggaaagagagagcaaGAACGTGGGAGAATTTGCCTGTTCCATGTGCCAGAGTCGTGTCGGCTGTGCTGTGTCCTCACTGGGATCTACAGTGTCCCCCACTCACCCTCTGCAGCAGGGTGGAACAACACAGCTGGCACCGTCCCTGACACTAACCCCAGGAGCAACAATTCTCCTGAAGATACTGACCATCTACCTCCTCTTGAAGAATTGTTTGGTGACCTCCAAGGTGACGATTACATCGAACGACTTGAAGAACTTGCAGAGAGCCTGCTACGGGAGGTTACAGCAGAAGTGGAAGCAAATTCTCATAGAACAAATGAACAAGTGTCAGCCAAGGAAAATACCACTGAGAAATGTCACTATCCAAAAAGAGTGGTGGGGCAGACACCAAAAGATGTGGAAACCAATGGAACCTGTAGAAGCATGA
Protein Sequence
MSVLKSVIITLPKGLSSKTPGVISATELSKSVPKLNFCASVLTDKARMDPKKLTKYEEMQDDGTSFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLREQNELLTQECSILRSQNEILVTENKRLRKERESKNVGEFACSMCQSRVGCAVSSLGSTVSPTHPLQQGGTTQLAPSLTLTPGATILLKILTIYLLLKNCLVTSKVTITSNDLKNLQRACYGRLQQKWKQILIEQMNKCQPRKIPLRNVTIQKEWWGRHQKMWKPMEPVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01070809;
80% Identity
-