Focc005346.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- gatad1
- Assembly
- None
- Location
- ML763151.1:366762-368275[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-08 7.7e-05 22.1 1.5 1 33 9 39 9 42 0.90
Sequence Information
- Coding Sequence
- ATGCCTTTCGGTCTAAAACCAAAATGTTTCCAATGTCAAAAAACGGACTCTTTTATGTGGAGGAAAACGGAGGATGGTTTTATTTGCAATGAATGTGTGGAACAGCAGCGAAATGGTAAACTGAGAAGCAGCCGTGATCAAGCATCAAGTAGATCATCAGTTGACAATGACCCTAAAAATGCAAGAAAAAGTACCCGTACTACCAGAAATTATAAGACTAGATTGAATCCATTTGCCTTACCTAAACCGTACTCTCCCAAAGGCAAGGGTCGAAGAATAATCTTCAAAAAAACTCCTCAGAAAGCTCCAGGAGCTGTAACATCACCCGTCACAAGCAATTATGTTTTTCACAAgGGCAGCTATATCCAAGTTGGCGACATTGTTTCTCTTCAAGATGTGGATGGTGGCATTTATTATGCTCAAATACGTGGTCTGCTGACTGATCAGTATTGTGAAAAGAGTGCAGTCATTACATGGCTGATCCCCACCACTGCCAGTCCTGATCCTGATGATGGCTTTGACCCCGCATCTTATGTTATTGGGCCTGATGAAGATATTCCACGAAAATTAGAATGCATGGAGTTTGTTATGCACGCGCCATCAGACTATTATAAAGCTCGTAATACACCGTATCCCCCAACAAATCCTCCTGAGACCAAGAACTCCTTCATTTGGATGAGATTAAGCTTGAAGCCACCTAAGCCAAGCAGCAAGACTGAATAA
- Protein Sequence
- MPFGLKPKCFQCQKTDSFMWRKTEDGFICNECVEQQRNGKLRSSRDQASSRSSVDNDPKNARKSTRTTRNYKTRLNPFALPKPYSPKGKGRRIIFKKTPQKAPGAVTSPVTSNYVFHKGSYIQVGDIVSLQDVDGGIYYAQIRGLLTDQYCEKSAVITWLIPTTASPDPDDGFDPASYVIGPDEDIPRKLECMEFVMHAPSDYYKARNTPYPPTNPPETKNSFIWMRLSLKPPKPSSKTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01435734;
- 90% Identity
- iTF_01435734;
- 80% Identity
- -