Focc005326.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- pnr
- Assembly
- None
- Location
- ML763151.1:124981-129817[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.6e+04 -6.1 3.4 20 26 12 18 10 18 0.78 2 2 3.2e-17 8.8e-14 50.7 4.4 1 35 496 529 496 530 0.98
Sequence Information
- Coding Sequence
- ATGTGCAGTGTTCCGCAAAAGTTTTATGAACTCTGTCGTCTTTGTTTATCCTGTGATGGTGTGAAATTGTCTATTTTCGACGATGAGGGTATACAACGCAACTTTCCTCACAAAATTATGTCCTGTCTGTCAATCGTGGTATCAGAGCAAGACCTCTTACCACCATTAGTTTGCCAGCGTTGTGTCTATAAGTTGGATGTACTTCATGACTTCAGAGAAGGAGCAAGAAAATCTGATACAATTCTGAAACAGTACTTAAACTATGCAGAGCAGGAtggaaaaGACCACTCCCATGAGGAATTGCCACTGCCAAAGCCAATTGatttaaattcaaaatttgGATCAAAGCTTAATAAAAGTTTATTTGAAGAAAAAGCACCACCACCTAAACCTCTGGACTTCAAAAGAAATGGATTTGTTGCTTCAGTCAAGAATGAGGGCGACGGAATGAATAAGAGTCCTCCCCCTGTAGCAGAAGCAAAATGTGACATAACTGATAGAATAAAAGACGAGAATGTTGAGGATGACTTTTATGATGATGAATGTAGTAATAGTTCCAGGCTAGTTGTAGCAGAAGGGGAAGAAGCTGATGAAAGTCAAGGTGAATGTGAAATTGAAAATGGATCTGTCCAAACTAGTGGTGTTGAGAATGGGGAGGGTGGTAAAGACAGCATACTCGGGATTGATATgtcaaagaaaagagaagaacaTCGTGATAAAATGCTGGATGAGGAAGCTGAAGATAGGCACTCCCAGGACATGGAACCTGCAAGCCCAGAATCCTTGGGAAGGCCTTTACTTGAGCCTGAAGTTCAGTTGAAGGAGGACAATGGACGTGTTTGGACTTCCCCATCACGAATTGATGACCAAGAGAATGCATCTGGGAATCTTCTGCGTTCTCTGATCACTAATCGTACAGAAAGATATCAACCTccttcctcatcatcatctcctACTCCTTCTCCTGTGCTGTCCTCATTACAACAGTCACTCCAACAGTCTCTCAAAAACAGGAGTGAAATACTGGCTAAAGCACTTTTGCGAGGGCCGTCACCAAAGAATTTCCATCATgtatcttcatcttcttctcctGCATCCCATCATTTTGGAGGAGATGGTCAGcAAGTTGAACCACCCAAAGACCATATGCCATTACTCATTCGAAACAATGTAAGTGTTATCCCAGTTTCTGCGGGGCGTATGCAAGGTTGTGGCCGGCGCAAACAAAGTTACCCTTCCAGAGCTCCAGATGCCTTCACTGTTTCCAGTCAAGCTAGTAGAAGCCCAGCAAATCTTGTTCAAGAAGGAGTAGAGGAAGATGATGCTGTTGATGGAGGAGATGCAGAGGAATATGTGGAAGAACCTATGGAAGAGGGGGATGATGGTGAAGAAGATGGTTCAGAAGCTAATGATTCCAACAATTGGTCTAATTTCTCAGGAGTTGTCAAGTCAGGAAAGCTTGCTGCTCGCCGTGTTGACTTGTCGTGCACCAATTGTGGTACAATGACAACCACAATATGGCGTCGCAACCCTCTTGGTGAAATGGTTTGCAATGCTTGTGGTTTATACTACAAACTCCATGGTGTAAACCGCCCTGTCACCATGCGCCGTGACACAATCCACACAAGACGTCGACGTCCGAAAGGTGAAAAATCCCCTCGACACCGCAGTAAAAACAAACCGTCCCCTGTGTCAGCTGGTGGAAATGGAGTTAGTGTAAGTCCTCAGACAGGAAGTAGTGTTCCCCCAAGATCCTCTGCCTTAGAAGATCATGATGAAATGTTAGCTGCTTTACGTCGTCAAATCCAGCCTCATTTAATGCTTGCTGCACTTCAACACAACAACAAGAATAACAACAGTGCTGCTGTTGCCAATTTAGCACTGCAACGACATCAGTTAAATCTGCCCAACTTGTCTCAGCCAAATGTGGTGCGGGCTCACGCCTCAGCCCCATACCTTTCAGTGCCAAATTATGCAACAGTCCAAGTCAAAACAGAAGCTATGAACTCAGGTGAGAAGGACTCCTCTAAGAATTTGGCTGATGTGCCGCTCAATTTGGTTGCTTCAACTCAAAGTGATTGA
- Protein Sequence
- MCSVPQKFYELCRLCLSCDGVKLSIFDDEGIQRNFPHKIMSCLSIVVSEQDLLPPLVCQRCVYKLDVLHDFREGARKSDTILKQYLNYAEQDGKDHSHEELPLPKPIDLNSKFGSKLNKSLFEEKAPPPKPLDFKRNGFVASVKNEGDGMNKSPPPVAEAKCDITDRIKDENVEDDFYDDECSNSSRLVVAEGEEADESQGECEIENGSVQTSGVENGEGGKDSILGIDMSKKREEHRDKMLDEEAEDRHSQDMEPASPESLGRPLLEPEVQLKEDNGRVWTSPSRIDDQENASGNLLRSLITNRTERYQPPSSSSSPTPSPVLSSLQQSLQQSLKNRSEILAKALLRGPSPKNFHHVSSSSSPASHHFGGDGQQVEPPKDHMPLLIRNNVSVIPVSAGRMQGCGRRKQSYPSRAPDAFTVSSQASRSPANLVQEGVEEDDAVDGGDAEEYVEEPMEEGDDGEEDGSEANDSNNWSNFSGVVKSGKLAARRVDLSCTNCGTMTTTIWRRNPLGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSPRHRSKNKPSPVSAGGNGVSVSPQTGSSVPPRSSALEDHDEMLAALRRQIQPHLMLAALQHNNKNNNSAAVANLALQRHQLNLPNLSQPNVVRAHASAPYLSVPNYATVQVKTEAMNSGEKDSSKNLADVPLNLVASTQSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732363;
- 90% Identity
- -
- 80% Identity
- -